RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 VGLL2Q8N8G2 317 aa26.57■■□□□ 1.84
RTN4R-205ENST00000469601 CDCA5Q96FF9 252 aa26.57■■□□□ 1.84
RTN4R-205ENST00000469601 WBP1LQ9NX94 342 aa26.57■■□□□ 1.84
RTN4R-205ENST00000469601 ZBED9Q6R2W3 1325 aa26.57■■□□□ 1.84
RTN4R-205ENST00000469601 FAM205AQ6ZU69 1335 aa26.57■■□□□ 1.84
RTN4R-205ENST00000469601 BCAR3O75815 825 aa26.56■■□□□ 1.84
RTN4R-205ENST00000469601 PTPN12Q05209 780 aaKnown RBP26.56■■□□□ 1.84
RTN4R-205ENST00000469601 PUM3Q15397 648 aaKnown RBP26.56■■□□□ 1.84
RTN4R-205ENST00000469601 DLGAP5Q15398 846 aa26.56■■□□□ 1.84
RTN4R-205ENST00000469601 DLK2Q6UY11 383 aa26.56■■□□□ 1.84
RTN4R-205ENST00000469601 CERS5Q8N5B7 392 aa26.56■■□□□ 1.84
RTN4R-205ENST00000469601 LRRFIP2Q9Y608 721 aaKnown RBP26.56■■□□□ 1.84
RTN4R-205ENST00000469601 A0A1B0GUL6 1792 aa26.56■■□□□ 1.84
RTN4R-205ENST00000469601 IFIT1P09914 478 aaKnown RBP26.55■■□□□ 1.84
RTN4R-205ENST00000469601 TRIM27P14373 513 aa26.55■■□□□ 1.84
RTN4R-205ENST00000469601 MEIS3Q99687 375 aa26.55■■□□□ 1.84
RTN4R-205ENST00000469601 CIAO1O76071 339 aa26.54■■□□□ 1.84
RTN4R-205ENST00000469601 FKBP1BP68106 108 aa26.54■■□□□ 1.84
RTN4R-205ENST00000469601 FBXO33Q7Z6M2 555 aa26.54■■□□□ 1.84
RTN4R-205ENST00000469601 APOBEC3FQ8IUX4 373 aaKnown RBP26.54■■□□□ 1.84
RTN4R-205ENST00000469601 MTMR14Q8NCE2 650 aa26.54■■□□□ 1.84
RTN4R-205ENST00000469601 BEGAINQ9BUH8 593 aa26.54■■□□□ 1.84
RTN4R-205ENST00000469601 FRAT2O75474 233 aaPredicted RBP26.53■■□□□ 1.84
RTN4R-205ENST00000469601 CTCFP49711 727 aaPredicted RBP26.53■■□□□ 1.84
RTN4R-205ENST00000469601 MFSD14BQ5SR56 506 aa26.53■■□□□ 1.84
RTN4R-205ENST00000469601 ZKSCAN2Q63HK3 967 aa26.53■■□□□ 1.84
RTN4R-205ENST00000469601 ZBED3Q96IU2 234 aaPredicted RBP26.53■■□□□ 1.84
RTN4R-205ENST00000469601 MYO1BO43795 1136 aa26.52■■□□□ 1.84
RTN4R-205ENST00000469601 LPIN2Q92539 896 aa26.52■■□□□ 1.84
RTN4R-205ENST00000469601 ZNF646O15015 1829 aaPredicted RBP26.51■■□□□ 1.83
RTN4R-205ENST00000469601 F8W031 263 aaPredicted RBP26.51■■□□□ 1.83
RTN4R-205ENST00000469601 FOXN1O15353 648 aa26.51■■□□□ 1.83
RTN4R-205ENST00000469601 SLC5A1P13866 664 aa26.51■■□□□ 1.83
RTN4R-205ENST00000469601 NF2P35240 595 aa26.51■■□□□ 1.83
RTN4R-205ENST00000469601 NOGQ13253 232 aa26.51■■□□□ 1.83
RTN4R-205ENST00000469601 RGMBQ6NW40 437 aa26.51■■□□□ 1.83
RTN4R-205ENST00000469601 CCDC102AQ96A19 550 aa26.51■■□□□ 1.83
RTN4R-205ENST00000469601 JAG2Q9Y219 1238 aa26.51■■□□□ 1.83
RTN4R-205ENST00000469601 FGFR2P21802 821 aa26.5■■□□□ 1.83
RTN4R-205ENST00000469601 COL13A1Q5TAT6 717 aaPredicted RBP26.5■■□□□ 1.83
RTN4R-205ENST00000469601 IFFO2Q5TF58 517 aa26.5■■□□□ 1.83
RTN4R-205ENST00000469601 TBC1D22AQ8WUA7 517 aa26.5■■□□□ 1.83
RTN4R-205ENST00000469601 CEP126Q9P2H0 1117 aa26.5■■□□□ 1.83
RTN4R-205ENST00000469601 IL15P40933 162 aaPredicted RBP26.49■■□□□ 1.83
RTN4R-205ENST00000469601 CFAP100Q494V2 611 aa26.49■■□□□ 1.83
RTN4R-205ENST00000469601 ATG9AQ7Z3C6 839 aa26.49■■□□□ 1.83
RTN4R-205ENST00000469601 CLUAP1Q96AJ1 413 aa26.49■■□□□ 1.83
RTN4R-205ENST00000469601 SIL1Q9H173 461 aa26.49■■□□□ 1.83
RTN4R-205ENST00000469601 AOC2O75106 756 aa26.48■■□□□ 1.83
RTN4R-205ENST00000469601 RBM5P52756 815 aaKnown RBP eCLIP26.48■■□□□ 1.83
RTN4R-205ENST00000469601 COPRSQ9NQ92 184 aa26.48■■□□□ 1.83
RTN4R-205ENST00000469601 SERPINA10Q9UK55 444 aa26.48■■□□□ 1.83
RTN4R-205ENST00000469601 THSD7BQ9C0I4 1608 aa26.47■■□□□ 1.83
RTN4R-205ENST00000469601 SPDYE2BA6NHP3 402 aa26.47■■□□□ 1.83
RTN4R-205ENST00000469601 GNAI2P04899 355 aa26.47■■□□□ 1.83
RTN4R-205ENST00000469601 SPDYE6P0CI01 402 aa26.47■■□□□ 1.83
RTN4R-205ENST00000469601 BCAMP50895 628 aa26.47■■□□□ 1.83
RTN4R-205ENST00000469601 ZNF157P51786 506 aaPredicted RBP26.47■■□□□ 1.83
RTN4R-205ENST00000469601 MTX1Q13505 466 aa26.47■■□□□ 1.83
RTN4R-205ENST00000469601 PRDM10Q9NQV6 1147 aa26.47■■□□□ 1.83
RTN4R-205ENST00000469601 TTF2Q9UNY4 1162 aaKnown RBP26.47■■□□□ 1.83
RTN4R-205ENST00000469601 SRGAP3O43295 1099 aa26.46■■□□□ 1.83
RTN4R-205ENST00000469601 PPP2R3BQ9Y5P8 575 aa26.46■■□□□ 1.83
RTN4R-205ENST00000469601 COL1A1P02452 1464 aaPredicted RBP26.45■■□□□ 1.82
RTN4R-205ENST00000469601 CA12O43570 354 aa26.45■■□□□ 1.82
RTN4R-205ENST00000469601 CHAF1AQ13111 956 aaPredicted RBP26.45■■□□□ 1.82
RTN4R-205ENST00000469601 ATP2B3Q16720 1220 aa26.45■■□□□ 1.82
RTN4R-205ENST00000469601 FTSJ3Q8IY81 847 aaKnown RBP26.45■■□□□ 1.82
RTN4R-205ENST00000469601 SCAF8Q9UPN6 1271 aaKnown RBP26.45■■□□□ 1.82
RTN4R-205ENST00000469601 IQSEC3Q9UPP2 1182 aaPredicted RBP26.45■■□□□ 1.82
RTN4R-205ENST00000469601 DEFB129Q9H1M3 183 aa26.44■■□□□ 1.82
RTN4R-205ENST00000469601 SUGT1Q9Y2Z0 365 aa26.44■■□□□ 1.82
RTN4R-205ENST00000469601 PCNTO95613 3336 aa26.44■■□□□ 1.82
RTN4R-205ENST00000469601 TTLL12Q14166 644 aaPredicted RBP26.43■■□□□ 1.82
RTN4R-205ENST00000469601 PRAMEF18Q5VWM3 479 aa26.43■■□□□ 1.82
RTN4R-205ENST00000469601 TNS4Q8IZW8 715 aa26.43■■□□□ 1.82
RTN4R-205ENST00000469601 TMEM57Q8N5G2 664 aa26.43■■□□□ 1.82
RTN4R-205ENST00000469601 PRMT6Q96LA8 375 aaPredicted RBP26.43■■□□□ 1.82
RTN4R-205ENST00000469601 GNL3LQ9NVN8 582 aaKnown RBP26.43■■□□□ 1.82
RTN4R-205ENST00000469601 PA2G4Q9UQ80 394 aaKnown RBP26.43■■□□□ 1.82
RTN4R-205ENST00000469601 TNNQ9UQP3 1299 aa26.43■■□□□ 1.82
RTN4R-205ENST00000469601 POLR2AP24928 1970 aaKnown RBP26.42■■□□□ 1.82
RTN4R-205ENST00000469601 HDLBPQ00341 1268 aaKnown RBP26.42■■□□□ 1.82
RTN4R-205ENST00000469601 MAST3O60307 1309 aa26.41■■□□□ 1.82
RTN4R-205ENST00000469601 PAPPA2Q9BXP8 1791 aa26.41■■□□□ 1.82
RTN4R-205ENST00000469601 FAM155AB1AL88 458 aaPredicted RBP26.41■■□□□ 1.82
RTN4R-205ENST00000469601 LBX1P52954 281 aa26.41■■□□□ 1.82
RTN4R-205ENST00000469601 TNFAIP1Q13829 316 aa26.41■■□□□ 1.82
RTN4R-205ENST00000469601 ARMC9Q7Z3E5 817 aa26.41■■□□□ 1.82
RTN4R-205ENST00000469601 DZIP1LQ8IYY4 767 aaKnown RBP26.41■■□□□ 1.82
RTN4R-205ENST00000469601 WDR66Q8TBY9 1149 aa26.41■■□□□ 1.82
RTN4R-205ENST00000469601 CLRN2A0PK11 232 aa26.4■■□□□ 1.82
RTN4R-205ENST00000469601 SLC10A3P09131 477 aa26.4■■□□□ 1.82
RTN4R-205ENST00000469601 HSPA8P11142 646 aaKnown RBP26.4■■□□□ 1.82
RTN4R-205ENST00000469601 MRIQ9BWK5 157 aa26.4■■□□□ 1.82
RTN4R-205ENST00000469601 VEZTQ9HBM0 779 aa26.4■■□□□ 1.82
RTN4R-205ENST00000469601 AKAP2Q9Y2D5 859 aa26.4■■□□□ 1.82
RTN4R-205ENST00000469601 PCDHAC2Q9Y5I4 1007 aa26.4■■□□□ 1.82
RTN4R-205ENST00000469601 CRKP46108 304 aa26.39■■□□□ 1.82
RTN4R-205ENST00000469601 SUPT20HL1Q3ZLR7 823 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms