RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 EAPPQ56P03 285 aaPredicted RBP9.21□□□□□ -0.94
PTCD3-208ENST00000469585 USPL1Q5W0Q7 1092 aa9.21□□□□□ -0.94
PTCD3-208ENST00000469585 DHX32Q7L7V1 743 aaKnown RBP9.21□□□□□ -0.94
PTCD3-208ENST00000469585 CNTNAP3BQ96NU0 1288 aa9.21□□□□□ -0.94
PTCD3-208ENST00000469585 MDFIQ99750 246 aa9.21□□□□□ -0.94
PTCD3-208ENST00000469585 CNTNAP3Q9BZ76 1288 aa9.21□□□□□ -0.94
PTCD3-208ENST00000469585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.21□□□□□ -0.94
PTCD3-208ENST00000469585 FER1L4A9Z1Z3 1794 aa9.21□□□□□ -0.94
PTCD3-208ENST00000469585 TCOF1Q13428 1488 aaKnown RBP9.21□□□□□ -0.94
PTCD3-208ENST00000469585 PNMA6FA0A0J9YX94 578 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 EREGO14944 169 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 PSAPP07602 524 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 TAGLNQ01995 201 aaKnown RBP9.2□□□□□ -0.94
PTCD3-208ENST00000469585 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
PTCD3-208ENST00000469585 TNFRSF25Q93038 417 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 PMEPA1Q969W9 287 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 BCL2L13Q9BXK5 485 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 RRP7BPQ9NSQ0 103 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 WASHC2CQ9Y4E1 1318 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 KIF15Q9NS87 1388 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 DUOX2Q9NRD8 1548 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 MAST1Q9Y2H9 1570 aa9.2□□□□□ -0.94
PTCD3-208ENST00000469585 DNMT1P26358 1616 aaKnown RBP9.2□□□□□ -0.94
PTCD3-208ENST00000469585 RBM47A0AV96 593 aaKnown RBP9.19□□□□□ -0.94
PTCD3-208ENST00000469585 ZBTB42B2RXF5 422 aa9.19□□□□□ -0.94
PTCD3-208ENST00000469585 CES1P23141 567 aa9.19□□□□□ -0.94
PTCD3-208ENST00000469585 ADH6P28332 368 aa9.19□□□□□ -0.94
PTCD3-208ENST00000469585 GMPRP36959 345 aa9.19□□□□□ -0.94
PTCD3-208ENST00000469585 FCHSD1Q86WN1 690 aa9.19□□□□□ -0.94
PTCD3-208ENST00000469585 TRPM4Q8TD43 1214 aa9.19□□□□□ -0.94
PTCD3-208ENST00000469585 SETDB2Q96T68 719 aa9.19□□□□□ -0.94
PTCD3-208ENST00000469585 WWC3Q9ULE0 1092 aa9.19□□□□□ -0.94
PTCD3-208ENST00000469585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTCD3-208ENST00000469585 PLXNC1O60486 1568 aa9.19□□□□□ -0.94
PTCD3-208ENST00000469585 RIMS1Q86UR5 1692 aaKnown RBP9.19□□□□□ -0.94
PTCD3-208ENST00000469585 CROCC2H7BZ55 1655 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 KIF4AO95239 1232 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 ADAMTS2O95450 1211 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 LDHBP07195 334 aaKnown RBP9.18□□□□□ -0.94
PTCD3-208ENST00000469585 PTPRMP28827 1452 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 NRLP54845 237 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 GPLD1P80108 840 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 PLAURQ03405 335 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 COL13A1Q5TAT6 717 aaPredicted RBP9.18□□□□□ -0.94
PTCD3-208ENST00000469585 TREML4Q6UXN2 200 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 MADDQ8WXG6 1647 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 ERBINQ96RT1 1412 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 KANSL3Q9P2N6 904 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 SALL4Q9UJQ4 1053 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 GGA1Q9UJY5 639 aa9.18□□□□□ -0.94
PTCD3-208ENST00000469585 ADAMTSL3P82987 1691 aa9.17□□□□□ -0.94
PTCD3-208ENST00000469585 FAM135AQ9P2D6 1515 aa9.17□□□□□ -0.94
PTCD3-208ENST00000469585 NEURL1BA8MQ27 555 aa9.17□□□□□ -0.94
PTCD3-208ENST00000469585 ADARB2-AS1A8MUL3 147 aa9.17□□□□□ -0.94
PTCD3-208ENST00000469585 PHF20L1A8MW92 1017 aa9.17□□□□□ -0.94
PTCD3-208ENST00000469585 GIPC2Q8TF65 315 aa9.17□□□□□ -0.94
PTCD3-208ENST00000469585 ACDQ96AP0 544 aa9.17□□□□□ -0.94
PTCD3-208ENST00000469585 OXCT2Q9BYC2 517 aaPredicted RBP9.17□□□□□ -0.94
PTCD3-208ENST00000469585 DNAJB12Q9NXW2 375 aaKnown RBP9.17□□□□□ -0.94
PTCD3-208ENST00000469585 ABCC5O15440 1437 aa9.16□□□□□ -0.94
PTCD3-208ENST00000469585 POLR3DP05423 398 aaPredicted RBP9.16□□□□□ -0.94
PTCD3-208ENST00000469585 SLURP2P0DP57 97 aa9.16□□□□□ -0.94
PTCD3-208ENST00000469585 ZNF16P17020 682 aaPredicted RBP9.16□□□□□ -0.94
PTCD3-208ENST00000469585 SLCO4C1Q6ZQN7 724 aa9.16□□□□□ -0.94
PTCD3-208ENST00000469585 GALNT12Q8IXK2 581 aa9.16□□□□□ -0.94
PTCD3-208ENST00000469585 GOLGA6L1Q8N7Z2 621 aa9.16□□□□□ -0.94
PTCD3-208ENST00000469585 CCDC74AQ96AQ1 378 aa9.16□□□□□ -0.94
PTCD3-208ENST00000469585 UBE2OQ9C0C9 1292 aaKnown RBP9.16□□□□□ -0.94
PTCD3-208ENST00000469585 GDF2Q9UK05 429 aaPredicted RBP9.16□□□□□ -0.94
PTCD3-208ENST00000469585 EIF2AK4Q9P2K8 1649 aaKnown RBP9.16□□□□□ -0.94
PTCD3-208ENST00000469585 PRPF40AO75400 957 aaKnown RBP9.15□□□□□ -0.94
PTCD3-208ENST00000469585 HYAL2Q12891 473 aa9.15□□□□□ -0.94
PTCD3-208ENST00000469585 ALG1LQ6GMV1 187 aa9.15□□□□□ -0.94
PTCD3-208ENST00000469585 C1orf229Q6ZS94 237 aaPredicted RBP9.15□□□□□ -0.94
PTCD3-208ENST00000469585 FBF1Q8TES7 1133 aa9.15□□□□□ -0.94
PTCD3-208ENST00000469585 NSUN5Q96P11 429 aaKnown RBP9.15□□□□□ -0.94
PTCD3-208ENST00000469585 IGFLR1Q9H665 355 aa9.15□□□□□ -0.94
PTCD3-208ENST00000469585 KDM5DQ9BY66 1539 aa9.15□□□□□ -0.95
PTCD3-208ENST00000469585 UHRF1BP1Q6BDS2 1440 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 ROCK1Q13464 1354 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 ELOA3CA0A087WX78 387 aaPredicted RBP9.14□□□□□ -0.95
PTCD3-208ENST00000469585 LOC102724428A0A0B4J2F2 783 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 ELOA3DA6NLF2 546 aaPredicted RBP9.14□□□□□ -0.95
PTCD3-208ENST00000469585 ADH7P40394 386 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 SIK1P57059 783 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 ATP2B2Q01814 1243 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 MLLT1Q03111 559 aaPredicted RBP9.14□□□□□ -0.95
PTCD3-208ENST00000469585 PCSK7Q16549 785 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 ELOA3BQ3SY89 546 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 ELOA3Q8NG57 546 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 NPHS2Q9NP85 383 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 SLC6A14Q9UN76 642 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 ANKRD50Q9ULJ7 1429 aa9.14□□□□□ -0.95
PTCD3-208ENST00000469585 J3QW42 95 aa9.13□□□□□ -0.95
PTCD3-208ENST00000469585 IRS1P35568 1242 aa9.13□□□□□ -0.95
PTCD3-208ENST00000469585 FGD1P98174 961 aa9.13□□□□□ -0.95
PTCD3-208ENST00000469585 ZNF326Q5BKZ1 582 aaKnown RBP9.13□□□□□ -0.95
PTCD3-208ENST00000469585 PEAR1Q5VY43 1037 aaPredicted RBP9.13□□□□□ -0.95
PTCD3-208ENST00000469585 CEP120Q8N960 986 aa9.13□□□□□ -0.95
PTCD3-208ENST00000469585 ZNF428Q96B54 188 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms