RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 LRRFIP2Q9Y608 721 aaKnown RBP22.86■■□□□ 1.25
PHGDH-204ENST00000469443 WNT10BO00744 389 aa22.85■■□□□ 1.25
PHGDH-204ENST00000469443 SASH1O94885 1247 aa22.85■■□□□ 1.25
PHGDH-204ENST00000469443 TRIM27P14373 513 aa22.85■■□□□ 1.25
PHGDH-204ENST00000469443 TDRD7Q8NHU6 1098 aaKnown RBP22.85■■□□□ 1.25
PHGDH-204ENST00000469443 FRAT1Q92837 279 aaPredicted RBP22.85■■□□□ 1.25
PHGDH-204ENST00000469443 FAM205AQ6ZU69 1335 aa22.84■■□□□ 1.25
PHGDH-204ENST00000469443 EYA2O00167 538 aa22.84■■□□□ 1.25
PHGDH-204ENST00000469443 CDCA5Q96FF9 252 aa22.84■■□□□ 1.25
PHGDH-204ENST00000469443 GBA2Q9HCG7 927 aaPredicted RBP22.84■■□□□ 1.25
PHGDH-204ENST00000469443 GNAI3P08754 354 aa22.83■■□□□ 1.25
PHGDH-204ENST00000469443 TNNQ9UQP3 1299 aa22.83■■□□□ 1.25
PHGDH-204ENST00000469443 JAG2Q9Y219 1238 aa22.83■■□□□ 1.25
PHGDH-204ENST00000469443 HUNKP57058 714 aa22.82■■□□□ 1.24
PHGDH-204ENST00000469443 GRM1Q13255 1194 aa22.82■■□□□ 1.24
PHGDH-204ENST00000469443 FBXO33Q7Z6M2 555 aa22.82■■□□□ 1.24
PHGDH-204ENST00000469443 C2orf69Q8N8R5 385 aa22.82■■□□□ 1.24
PHGDH-204ENST00000469443 ZBED3Q96IU2 234 aaPredicted RBP22.82■■□□□ 1.24
PHGDH-204ENST00000469443 WBP1LQ9NX94 342 aa22.82■■□□□ 1.24
PHGDH-204ENST00000469443 FBXO3Q9UK99 471 aa22.82■■□□□ 1.24
PHGDH-204ENST00000469443 PAPPA2Q9BXP8 1791 aa22.81■■□□□ 1.24
PHGDH-204ENST00000469443 PUM3Q15397 648 aaKnown RBP22.81■■□□□ 1.24
PHGDH-204ENST00000469443 CAVIN4Q5BKX8 364 aa22.81■■□□□ 1.24
PHGDH-204ENST00000469443 ZKSCAN2Q63HK3 967 aa22.81■■□□□ 1.24
PHGDH-204ENST00000469443 VPS37DQ86XT2 251 aa22.81■■□□□ 1.24
PHGDH-204ENST00000469443 F8W031 263 aaPredicted RBP22.8■■□□□ 1.24
PHGDH-204ENST00000469443 FGFR2P21802 821 aa22.8■■□□□ 1.24
PHGDH-204ENST00000469443 MAP2K1Q02750 393 aaPredicted RBP22.8■■□□□ 1.24
PHGDH-204ENST00000469443 DLGAP5Q15398 846 aa22.8■■□□□ 1.24
PHGDH-204ENST00000469443 ATG9AQ7Z3C6 839 aa22.8■■□□□ 1.24
PHGDH-204ENST00000469443 CLUAP1Q96AJ1 413 aa22.8■■□□□ 1.24
PHGDH-204ENST00000469443 AIDAQ96BJ3 306 aa22.8■■□□□ 1.24
PHGDH-204ENST00000469443 FOXN1O15353 648 aa22.79■■□□□ 1.24
PHGDH-204ENST00000469443 CIAO1O76071 339 aa22.79■■□□□ 1.24
PHGDH-204ENST00000469443 IFIT1P09914 478 aaKnown RBP22.79■■□□□ 1.24
PHGDH-204ENST00000469443 MAP2K2P36507 400 aa22.79■■□□□ 1.24
PHGDH-204ENST00000469443 MTMR14Q8NCE2 650 aa22.79■■□□□ 1.24
PHGDH-204ENST00000469443 SIL1Q9H173 461 aa22.79■■□□□ 1.24
PHGDH-204ENST00000469443 SCAF8Q9UPN6 1271 aaKnown RBP22.79■■□□□ 1.24
PHGDH-204ENST00000469443 MFSD14BQ5SR56 506 aa22.78■■□□□ 1.24
PHGDH-204ENST00000469443 APOBEC3FQ8IUX4 373 aaKnown RBP22.78■■□□□ 1.24
PHGDH-204ENST00000469443 AOC2O75106 756 aa22.77■■□□□ 1.24
PHGDH-204ENST00000469443 CFAP100Q494V2 611 aa22.77■■□□□ 1.24
PHGDH-204ENST00000469443 COL13A1Q5TAT6 717 aaPredicted RBP22.77■■□□□ 1.24
PHGDH-204ENST00000469443 RGMBQ6NW40 437 aa22.77■■□□□ 1.24
PHGDH-204ENST00000469443 LPIN2Q92539 896 aa22.77■■□□□ 1.24
PHGDH-204ENST00000469443 COPRSQ9NQ92 184 aa22.77■■□□□ 1.24
PHGDH-204ENST00000469443 IQSEC3Q9UPP2 1182 aaPredicted RBP22.77■■□□□ 1.24
PHGDH-204ENST00000469443 FRAT2O75474 233 aaPredicted RBP22.76■■□□□ 1.23
PHGDH-204ENST00000469443 SLC5A1P13866 664 aa22.76■■□□□ 1.23
PHGDH-204ENST00000469443 BCAMP50895 628 aa22.76■■□□□ 1.23
PHGDH-204ENST00000469443 MTX1Q13505 466 aa22.76■■□□□ 1.23
PHGDH-204ENST00000469443 CEP126Q9P2H0 1117 aa22.76■■□□□ 1.23
PHGDH-204ENST00000469443 PA2G4Q9UQ80 394 aaKnown RBP22.76■■□□□ 1.23
PHGDH-204ENST00000469443 COL1A1P02452 1464 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-204ENST00000469443 IL15P40933 162 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-204ENST00000469443 CTCFP49711 727 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-204ENST00000469443 FKBP1BP68106 108 aa22.75■■□□□ 1.23
PHGDH-204ENST00000469443 TMEM57Q8N5G2 664 aa22.75■■□□□ 1.23
PHGDH-204ENST00000469443 TTF2Q9UNY4 1162 aaKnown RBP22.75■■□□□ 1.23
PHGDH-204ENST00000469443 PCDHAC2Q9Y5I4 1007 aa22.75■■□□□ 1.23
PHGDH-204ENST00000469443 SPDYE2BA6NHP3 402 aa22.74■■□□□ 1.23
PHGDH-204ENST00000469443 SRGAP3O43295 1099 aa22.74■■□□□ 1.23
PHGDH-204ENST00000469443 GNAI2P04899 355 aa22.74■■□□□ 1.23
PHGDH-204ENST00000469443 SPDYE6P0CI01 402 aa22.74■■□□□ 1.23
PHGDH-204ENST00000469443 CHAF1AQ13111 956 aaPredicted RBP22.74■■□□□ 1.23
PHGDH-204ENST00000469443 NOGQ13253 232 aa22.74■■□□□ 1.23
PHGDH-204ENST00000469443 PRAMEF18Q5VWM3 479 aa22.74■■□□□ 1.23
PHGDH-204ENST00000469443 TBC1D22AQ8WUA7 517 aa22.74■■□□□ 1.23
PHGDH-204ENST00000469443 AKAP11Q9UKA4 1901 aa22.74■■□□□ 1.23
PHGDH-204ENST00000469443 MYO1BO43795 1136 aa22.73■■□□□ 1.23
PHGDH-204ENST00000469443 NF2P35240 595 aa22.73■■□□□ 1.23
PHGDH-204ENST00000469443 RBM5P52756 815 aaKnown RBP eCLIP22.73■■□□□ 1.23
PHGDH-204ENST00000469443 ATP2B3Q16720 1220 aa22.73■■□□□ 1.23
PHGDH-204ENST00000469443 PRMT6Q96LA8 375 aaPredicted RBP22.73■■□□□ 1.23
PHGDH-204ENST00000469443 SERPINA10Q9UK55 444 aa22.73■■□□□ 1.23
PHGDH-204ENST00000469443 ZNF157P51786 506 aaPredicted RBP22.72■■□□□ 1.23
PHGDH-204ENST00000469443 CCDC102AQ96A19 550 aa22.72■■□□□ 1.23
PHGDH-204ENST00000469443 BEGAINQ9BUH8 593 aa22.72■■□□□ 1.23
PHGDH-204ENST00000469443 FAM155AB1AL88 458 aaPredicted RBP22.71■■□□□ 1.23
PHGDH-204ENST00000469443 IFFO2Q5TF58 517 aa22.71■■□□□ 1.23
PHGDH-204ENST00000469443 FTSJ3Q8IY81 847 aaKnown RBP22.71■■□□□ 1.23
PHGDH-204ENST00000469443 PRDM10Q9NQV6 1147 aa22.71■■□□□ 1.23
PHGDH-204ENST00000469443 CLRN2A0PK11 232 aa22.7■■□□□ 1.22
PHGDH-204ENST00000469443 GRIK5Q16478 980 aa22.7■■□□□ 1.22
PHGDH-204ENST00000469443 DZIP1LQ8IYY4 767 aaKnown RBP22.7■■□□□ 1.22
PHGDH-204ENST00000469443 DEFB129Q9H1M3 183 aa22.7■■□□□ 1.22
PHGDH-204ENST00000469443 AOX1Q06278 1338 aa22.69■■□□□ 1.22
PHGDH-204ENST00000469443 SLC10A3P09131 477 aa22.69■■□□□ 1.22
PHGDH-204ENST00000469443 HSPA8P11142 646 aaKnown RBP22.69■■□□□ 1.22
PHGDH-204ENST00000469443 MOB2Q70IA6 237 aa22.69■■□□□ 1.22
PHGDH-204ENST00000469443 ZIC5Q96T25 663 aa22.69■■□□□ 1.22
PHGDH-204ENST00000469443 PPP2R3BQ9Y5P8 575 aa22.69■■□□□ 1.22
PHGDH-204ENST00000469443 CRKP46108 304 aa22.68■■□□□ 1.22
PHGDH-204ENST00000469443 LBX1P52954 281 aa22.68■■□□□ 1.22
PHGDH-204ENST00000469443 HDLBPQ00341 1268 aaKnown RBP22.68■■□□□ 1.22
PHGDH-204ENST00000469443 TTLL12Q14166 644 aaPredicted RBP22.68■■□□□ 1.22
PHGDH-204ENST00000469443 VEZTQ9HBM0 779 aa22.68■■□□□ 1.22
PHGDH-204ENST00000469443 SUGT1Q9Y2Z0 365 aa22.68■■□□□ 1.22
PHGDH-204ENST00000469443 PNMA6EA0A0J9YXQ4 647 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms