RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 CRHR2Q13324 411 aa16.44■□□□□ 0.22
TRAPPC12-216ENST00000469400 SUPT20HL1Q3ZLR7 823 aa16.44■□□□□ 0.22
TRAPPC12-216ENST00000469400 CD99L2Q8TCZ2 262 aa16.44■□□□□ 0.22
TRAPPC12-216ENST00000469400 STK31Q9BXU1 1019 aa16.44■□□□□ 0.22
TRAPPC12-216ENST00000469400 CLRN2A0PK11 232 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 F8W031 263 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 SNAP23O00161 211 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 MYO1BO43795 1136 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 CSF1RP07333 972 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 GJA5P36382 358 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 GCKRQ14397 625 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 CFAP100Q494V2 611 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 NBPF12Q5TAG4 269 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 G2E3Q7L622 706 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 ARMC5Q96C12 935 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 PRMT6Q96LA8 375 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 MYH3P11055 1940 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 IRS2Q9Y4H2 1338 aa16.43■□□□□ 0.22
TRAPPC12-216ENST00000469400 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
TRAPPC12-216ENST00000469400 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
TRAPPC12-216ENST00000469400 EN2P19622 333 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC12-216ENST00000469400 CASP7P55210 303 aa16.42■□□□□ 0.22
TRAPPC12-216ENST00000469400 PTPN18Q99952 460 aa16.42■□□□□ 0.22
TRAPPC12-216ENST00000469400 EFCC1Q9HA90 598 aa16.42■□□□□ 0.22
TRAPPC12-216ENST00000469400 AOX1Q06278 1338 aa16.42■□□□□ 0.22
TRAPPC12-216ENST00000469400 CENPFP49454 3210 aa16.41■□□□□ 0.22
TRAPPC12-216ENST00000469400 TAF5LO75529 589 aa16.41■□□□□ 0.22
TRAPPC12-216ENST00000469400 USP2O75604 605 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC12-216ENST00000469400 IREB2P48200 963 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-216ENST00000469400 CAP1Q01518 475 aa16.41■□□□□ 0.22
TRAPPC12-216ENST00000469400 SP3Q02447 781 aa16.41■□□□□ 0.22
TRAPPC12-216ENST00000469400 C15orf52Q6ZUT6 534 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-216ENST00000469400 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-216ENST00000469400 VEZTQ9HBM0 779 aa16.41■□□□□ 0.22
TRAPPC12-216ENST00000469400 TESPA1A2RU30 521 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC12-216ENST00000469400 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
TRAPPC12-216ENST00000469400 IL1R1P14778 569 aa16.4■□□□□ 0.22
TRAPPC12-216ENST00000469400 ANKRD13AQ8IZ07 590 aa16.4■□□□□ 0.22
TRAPPC12-216ENST00000469400 HELBQ8NG08 1087 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC12-216ENST00000469400 ANKRD18BA2A2Z9 1011 aa16.39■□□□□ 0.21
TRAPPC12-216ENST00000469400 FKBP1AP62942 108 aaKnown RBP16.39■□□□□ 0.21
TRAPPC12-216ENST00000469400 RASA3Q14644 834 aa16.39■□□□□ 0.21
TRAPPC12-216ENST00000469400 JAG2Q9Y219 1238 aa16.39■□□□□ 0.21
TRAPPC12-216ENST00000469400 BRCA2P51587 3418 aa16.39■□□□□ 0.21
TRAPPC12-216ENST00000469400 FXR1P51114 621 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAPPC12-216ENST00000469400 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAPPC12-216ENST00000469400 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC12-216ENST00000469400 ZNF804AQ7Z570 1209 aa16.38■□□□□ 0.21
TRAPPC12-216ENST00000469400 MYH16Q9H6N6 1097 aa16.38■□□□□ 0.21
TRAPPC12-216ENST00000469400 FLIIQ13045 1269 aa16.37■□□□□ 0.21
TRAPPC12-216ENST00000469400 LINS1Q8NG48 757 aa16.37■□□□□ 0.21
TRAPPC12-216ENST00000469400 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
TRAPPC12-216ENST00000469400 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
TRAPPC12-216ENST00000469400 ZNF333Q96JL9 665 aa16.37■□□□□ 0.21
TRAPPC12-216ENST00000469400 MS4A4AQ96JQ5 239 aa16.37■□□□□ 0.21
TRAPPC12-216ENST00000469400 TMEM106CQ9BVX2 250 aa16.37■□□□□ 0.21
TRAPPC12-216ENST00000469400 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC12-216ENST00000469400 ELP3Q9H9T3 547 aa16.37■□□□□ 0.21
TRAPPC12-216ENST00000469400 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
TRAPPC12-216ENST00000469400 LAMB1P07942 1786 aa16.36■□□□□ 0.21
TRAPPC12-216ENST00000469400 FOXO4P98177 505 aa16.35■□□□□ 0.21
TRAPPC12-216ENST00000469400 FKBP5Q13451 457 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC12-216ENST00000469400 TNFAIP1Q13829 316 aa16.35■□□□□ 0.21
TRAPPC12-216ENST00000469400 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
TRAPPC12-216ENST00000469400 BRI3BPQ8WY22 251 aa16.35■□□□□ 0.21
TRAPPC12-216ENST00000469400 ZNF70Q9UC06 446 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC12-216ENST00000469400 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
TRAPPC12-216ENST00000469400 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
TRAPPC12-216ENST00000469400 SLC9C1Q4G0N8 1177 aa16.34■□□□□ 0.21
TRAPPC12-216ENST00000469400 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC12-216ENST00000469400 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
TRAPPC12-216ENST00000469400 CDAN1Q8IWY9 1227 aa16.34■□□□□ 0.21
TRAPPC12-216ENST00000469400 TEPSINQ96N21 525 aa16.34■□□□□ 0.21
TRAPPC12-216ENST00000469400 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC12-216ENST00000469400 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
TRAPPC12-216ENST00000469400 PTCH2Q9Y6C5 1203 aa16.34■□□□□ 0.21
TRAPPC12-216ENST00000469400 ECM29Q5VYK3 1845 aa16.33■□□□□ 0.21
TRAPPC12-216ENST00000469400 PLIN1O60240 522 aa16.33■□□□□ 0.2
TRAPPC12-216ENST00000469400 ARHGEF6Q15052 776 aa16.33■□□□□ 0.2
TRAPPC12-216ENST00000469400 TAF1CQ15572 869 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC12-216ENST00000469400 MFSD14BQ5SR56 506 aa16.33■□□□□ 0.2
TRAPPC12-216ENST00000469400 TDRD3Q9H7E2 651 aaKnown RBP16.33■□□□□ 0.2
TRAPPC12-216ENST00000469400 ZFYVE28Q9HCC9 887 aa16.33■□□□□ 0.2
TRAPPC12-216ENST00000469400 SERPINA10Q9UK55 444 aa16.33■□□□□ 0.2
TRAPPC12-216ENST00000469400 FAM205AQ6ZU69 1335 aa16.33■□□□□ 0.2
TRAPPC12-216ENST00000469400 CCL15-CCL14A0A0B4J2E2 113 aa16.32■□□□□ 0.2
TRAPPC12-216ENST00000469400 GTF2A2P52657 109 aa16.32■□□□□ 0.2
TRAPPC12-216ENST00000469400 MAP3K9P80192 1104 aa16.32■□□□□ 0.2
TRAPPC12-216ENST00000469400 VGLL4Q14135 290 aa16.32■□□□□ 0.2
TRAPPC12-216ENST00000469400 CCL15Q16663 113 aa16.32■□□□□ 0.2
TRAPPC12-216ENST00000469400 SLC4A8Q2Y0W8 1093 aa16.32■□□□□ 0.2
TRAPPC12-216ENST00000469400 FAM43AQ8N2R8 423 aa16.32■□□□□ 0.2
TRAPPC12-216ENST00000469400 ZNF594Q96JF6 807 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC12-216ENST00000469400 TTF2Q9UNY4 1162 aaKnown RBP16.32■□□□□ 0.2
TRAPPC12-216ENST00000469400 CEP290O15078 2479 aa16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 TCP10L2B9ZVM9 353 aa16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 MYCP01106 439 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 CCDC27Q2M243 656 aa16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 LMBR1LQ6UX01 489 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms