RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PRMT6Q96LA8 375 aaPredicted RBP15.61■□□□□ 0.09
HDAC3-204ENST00000469207 DEFB129Q9H1M3 183 aa15.61■□□□□ 0.09
HDAC3-204ENST00000469207 GPR25O00155 361 aa15.6■□□□□ 0.09
HDAC3-204ENST00000469207 CFAP100Q494V2 611 aa15.6■□□□□ 0.09
HDAC3-204ENST00000469207 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
HDAC3-204ENST00000469207 ARMC9Q7Z3E5 817 aa15.6■□□□□ 0.09
HDAC3-204ENST00000469207 APOBEC3FQ8IUX4 373 aaKnown RBP15.6■□□□□ 0.09
HDAC3-204ENST00000469207 HPS5Q9UPZ3 1129 aa15.6■□□□□ 0.09
HDAC3-204ENST00000469207 IL1R1P14778 569 aa15.59■□□□□ 0.09
HDAC3-204ENST00000469207 SPRYD7Q5W111 196 aa15.59■□□□□ 0.09
HDAC3-204ENST00000469207 SLC4A10Q6U841 1118 aa15.59■□□□□ 0.09
HDAC3-204ENST00000469207 LDHAL6AQ6ZMR3 332 aa15.59■□□□□ 0.09
HDAC3-204ENST00000469207 C15orf52Q6ZUT6 534 aaKnown RBP15.59■□□□□ 0.09
HDAC3-204ENST00000469207 CLMNQ96JQ2 1002 aa15.59■□□□□ 0.09
HDAC3-204ENST00000469207 PUS3Q9BZE2 481 aaKnown RBP15.59■□□□□ 0.09
HDAC3-204ENST00000469207 GRM8O00222 908 aa15.58■□□□□ 0.08
HDAC3-204ENST00000469207 CCDC57Q2TAC2 916 aa15.58■□□□□ 0.08
HDAC3-204ENST00000469207 NBPF12Q5TAG4 269 aaPredicted RBP15.58■□□□□ 0.08
HDAC3-204ENST00000469207 FAM9BQ8IZU0 186 aa15.58■□□□□ 0.08
HDAC3-204ENST00000469207 VEZTQ9HBM0 779 aa15.58■□□□□ 0.08
HDAC3-204ENST00000469207 CNNM1Q9NRU3 951 aa15.58■□□□□ 0.08
HDAC3-204ENST00000469207 ANP32CO43423 234 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 SLC34A2O95436 690 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 GYG1P46976 350 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 MMP14P50281 582 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 RBM5P52756 815 aaKnown RBP eCLIP15.57■□□□□ 0.08
HDAC3-204ENST00000469207 TAF7LQ5H9L4 462 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 ZNF804AQ7Z570 1209 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 MTMR14Q8NCE2 650 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 SLC10A4Q96EP9 437 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 KAZALD1Q96I82 304 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 SUCLG2Q96I99 432 aa15.57■□□□□ 0.08
HDAC3-204ENST00000469207 C9orf78Q9NZ63 289 aaPredicted RBP15.57■□□□□ 0.08
HDAC3-204ENST00000469207 SPDYE2BA6NHP3 402 aa15.56■□□□□ 0.08
HDAC3-204ENST00000469207 NBPF7P0C2Y1 421 aaPredicted RBP15.56■□□□□ 0.08
HDAC3-204ENST00000469207 SPDYE6P0CI01 402 aa15.56■□□□□ 0.08
HDAC3-204ENST00000469207 SSC5DA1L4H1 1573 aa15.56■□□□□ 0.08
HDAC3-204ENST00000469207 USP2O75604 605 aaPredicted RBP15.55■□□□□ 0.08
HDAC3-204ENST00000469207 GJA5P36382 358 aa15.55■□□□□ 0.08
HDAC3-204ENST00000469207 SREBF2Q12772 1141 aa15.55■□□□□ 0.08
HDAC3-204ENST00000469207 GRIK5Q16478 980 aa15.55■□□□□ 0.08
HDAC3-204ENST00000469207 CDAN1Q8IWY9 1227 aa15.55■□□□□ 0.08
HDAC3-204ENST00000469207 FAM84BQ96KN1 310 aaPredicted RBP15.55■□□□□ 0.08
HDAC3-204ENST00000469207 FKTNO75072 461 aa15.54■□□□□ 0.08
HDAC3-204ENST00000469207 RASA3Q14644 834 aa15.54■□□□□ 0.08
HDAC3-204ENST00000469207 MAP3K11Q16584 847 aa15.54■□□□□ 0.08
HDAC3-204ENST00000469207 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
HDAC3-204ENST00000469207 TDRD7Q8NHU6 1098 aaKnown RBP15.54■□□□□ 0.08
HDAC3-204ENST00000469207 WNK4Q96J92 1243 aa15.54■□□□□ 0.08
HDAC3-204ENST00000469207 SRCIN1Q9C0H9 1055 aa15.54■□□□□ 0.08
HDAC3-204ENST00000469207 TDRD3Q9H7E2 651 aaKnown RBP15.54■□□□□ 0.08
HDAC3-204ENST00000469207 IQSEC3Q9UPP2 1182 aaPredicted RBP15.54■□□□□ 0.08
HDAC3-204ENST00000469207 CACNA1FO60840 1977 aa15.54■□□□□ 0.08
HDAC3-204ENST00000469207 IGF2BP3O00425 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
HDAC3-204ENST00000469207 MYO1BO43795 1136 aa15.53■□□□□ 0.08
HDAC3-204ENST00000469207 PPP1R12BO60237 982 aaPredicted RBP15.53■□□□□ 0.08
HDAC3-204ENST00000469207 HIBADHP31937 336 aaKnown RBP15.53■□□□□ 0.08
HDAC3-204ENST00000469207 FKBP1AP62942 108 aaKnown RBP15.53■□□□□ 0.08
HDAC3-204ENST00000469207 PKN2Q16513 984 aaKnown RBP15.53■□□□□ 0.08
HDAC3-204ENST00000469207 MFSD14BQ5SR56 506 aa15.53■□□□□ 0.08
HDAC3-204ENST00000469207 A0A1B0GUL6 1792 aa15.53■□□□□ 0.08
HDAC3-204ENST00000469207 ALDH1L1O75891 902 aa15.52■□□□□ 0.08
HDAC3-204ENST00000469207 LRRC24Q50LG9 513 aa15.52■□□□□ 0.08
HDAC3-204ENST00000469207 ZNF70Q9UC06 446 aaPredicted RBP15.52■□□□□ 0.08
HDAC3-204ENST00000469207 TTF2Q9UNY4 1162 aaKnown RBP15.52■□□□□ 0.08
HDAC3-204ENST00000469207 RIPOR2Q9Y4F9 1068 aa15.52■□□□□ 0.08
HDAC3-204ENST00000469207 FAM205AQ6ZU69 1335 aa15.51■□□□□ 0.07
HDAC3-204ENST00000469207 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
HDAC3-204ENST00000469207 MANSC4A6NHS7 340 aaPredicted RBP15.51■□□□□ 0.07
HDAC3-204ENST00000469207 UBE4AQ14139 1066 aa15.51■□□□□ 0.07
HDAC3-204ENST00000469207 SUPT20HL1Q3ZLR7 823 aa15.51■□□□□ 0.07
HDAC3-204ENST00000469207 NOM1Q5C9Z4 860 aaKnown RBP15.51■□□□□ 0.07
HDAC3-204ENST00000469207 FBXO46Q6PJ61 603 aaPredicted RBP15.51■□□□□ 0.07
HDAC3-204ENST00000469207 KLHDC4Q8TBB5 520 aa15.51■□□□□ 0.07
HDAC3-204ENST00000469207 PTPN18Q99952 460 aa15.51■□□□□ 0.07
HDAC3-204ENST00000469207 CFHR5Q9BXR6 569 aa15.51■□□□□ 0.07
HDAC3-204ENST00000469207 BICC1Q9H694 974 aaKnown RBP15.51■□□□□ 0.07
HDAC3-204ENST00000469207 PPP2R3BQ9Y5P8 575 aa15.51■□□□□ 0.07
HDAC3-204ENST00000469207 TCP10L2B9ZVM9 353 aa15.5■□□□□ 0.07
HDAC3-204ENST00000469207 CAP1Q01518 475 aa15.5■□□□□ 0.07
HDAC3-204ENST00000469207 CHAF1AQ13111 956 aaPredicted RBP15.5■□□□□ 0.07
HDAC3-204ENST00000469207 DZIP1LQ8IYY4 767 aaKnown RBP15.5■□□□□ 0.07
HDAC3-204ENST00000469207 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
HDAC3-204ENST00000469207 ELP3Q9H9T3 547 aa15.5■□□□□ 0.07
HDAC3-204ENST00000469207 TRIM17Q9Y577 477 aa15.5■□□□□ 0.07
HDAC3-204ENST00000469207 COL1A1P02452 1464 aaPredicted RBP15.49■□□□□ 0.07
HDAC3-204ENST00000469207 ZBTB48P10074 688 aaPredicted RBP15.49■□□□□ 0.07
HDAC3-204ENST00000469207 IREB2P48200 963 aaKnown RBP15.49■□□□□ 0.07
HDAC3-204ENST00000469207 CACNB3P54284 484 aa15.49■□□□□ 0.07
HDAC3-204ENST00000469207 INHBEP58166 350 aa15.49■□□□□ 0.07
HDAC3-204ENST00000469207 SPDYE2Q495Y8 402 aa15.49■□□□□ 0.07
HDAC3-204ENST00000469207 MRPL50Q8N5N7 158 aaKnown RBP15.49■□□□□ 0.07
HDAC3-204ENST00000469207 ANKRD44Q8N8A2 993 aa15.49■□□□□ 0.07
HDAC3-204ENST00000469207 TEPSINQ96N21 525 aa15.49■□□□□ 0.07
HDAC3-204ENST00000469207 TMEM39BQ9GZU3 492 aa15.49■□□□□ 0.07
HDAC3-204ENST00000469207 ALDH1A1P00352 501 aa15.48■□□□□ 0.07
HDAC3-204ENST00000469207 CRKP46108 304 aa15.48■□□□□ 0.07
HDAC3-204ENST00000469207 BCAMP50895 628 aa15.48■□□□□ 0.07
HDAC3-204ENST00000469207 OTOP1Q7RTM1 612 aa15.48■□□□□ 0.07
HDAC3-204ENST00000469207 FBXO33Q7Z6M2 555 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms