RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 PCDHAC2Q9Y5I4 1007 aa15.59■□□□□ 0.09
COL5A1-207ENST00000469093 SPEF2Q9C093 1822 aa15.59■□□□□ 0.09
COL5A1-207ENST00000469093 SREBF2Q12772 1141 aa15.58■□□□□ 0.08
COL5A1-207ENST00000469093 LMBR1LQ6UX01 489 aa15.58■□□□□ 0.08
COL5A1-207ENST00000469093 R3HDMLQ9H3Y0 253 aa15.58■□□□□ 0.08
COL5A1-207ENST00000469093 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-207ENST00000469093 CHMP3Q9Y3E7 222 aa15.58■□□□□ 0.08
COL5A1-207ENST00000469093 ZNF646O15015 1829 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-207ENST00000469093 SLC10A4Q96EP9 437 aa15.57■□□□□ 0.08
COL5A1-207ENST00000469093 ZNF594Q96JF6 807 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-207ENST00000469093 PRMT6Q96LA8 375 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-207ENST00000469093 CFHR5Q9BXR6 569 aa15.57■□□□□ 0.08
COL5A1-207ENST00000469093 F8W031 263 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-207ENST00000469093 FKBP1AP62942 108 aaKnown RBP15.56■□□□□ 0.08
COL5A1-207ENST00000469093 MAP3K11Q16584 847 aa15.56■□□□□ 0.08
COL5A1-207ENST00000469093 CCDC57Q2TAC2 916 aa15.56■□□□□ 0.08
COL5A1-207ENST00000469093 CFAP100Q494V2 611 aa15.56■□□□□ 0.08
COL5A1-207ENST00000469093 LDHAL6AQ6ZMR3 332 aa15.56■□□□□ 0.08
COL5A1-207ENST00000469093 ZNF804AQ7Z570 1209 aa15.56■□□□□ 0.08
COL5A1-207ENST00000469093 JAG2Q9Y219 1238 aa15.56■□□□□ 0.08
COL5A1-207ENST00000469093 AOX1Q06278 1338 aa15.55■□□□□ 0.08
COL5A1-207ENST00000469093 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
COL5A1-207ENST00000469093 GRM8O00222 908 aa15.55■□□□□ 0.08
COL5A1-207ENST00000469093 PLIN1O60240 522 aa15.55■□□□□ 0.08
COL5A1-207ENST00000469093 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
COL5A1-207ENST00000469093 INHBEP58166 350 aa15.55■□□□□ 0.08
COL5A1-207ENST00000469093 CLMNQ96JQ2 1002 aa15.55■□□□□ 0.08
COL5A1-207ENST00000469093 PPP2R3BQ9Y5P8 575 aa15.55■□□□□ 0.08
COL5A1-207ENST00000469093 CLRN2A0PK11 232 aa15.54■□□□□ 0.08
COL5A1-207ENST00000469093 MYO1BO43795 1136 aa15.54■□□□□ 0.08
COL5A1-207ENST00000469093 PPP1R12BO60237 982 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-207ENST00000469093 FKTNO75072 461 aa15.54■□□□□ 0.08
COL5A1-207ENST00000469093 ALDH1A1P00352 501 aa15.54■□□□□ 0.08
COL5A1-207ENST00000469093 SUPT20HL1Q3ZLR7 823 aa15.54■□□□□ 0.08
COL5A1-207ENST00000469093 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
COL5A1-207ENST00000469093 C9orf78Q9NZ63 289 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-207ENST00000469093 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-207ENST00000469093 CACNA1FO60840 1977 aa15.54■□□□□ 0.08
COL5A1-207ENST00000469093 MANSC4A6NHS7 340 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-207ENST00000469093 UNCXA6NJT0 531 aa15.53■□□□□ 0.08
COL5A1-207ENST00000469093 USP2O75604 605 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-207ENST00000469093 ALDH1L1O75891 902 aa15.53■□□□□ 0.08
COL5A1-207ENST00000469093 TAF7LQ5H9L4 462 aa15.53■□□□□ 0.08
COL5A1-207ENST00000469093 NBPF12Q5TAG4 269 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-207ENST00000469093 FBXO46Q6PJ61 603 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-207ENST00000469093 TDRD7Q8NHU6 1098 aaKnown RBP15.53■□□□□ 0.08
COL5A1-207ENST00000469093 CNNM1Q9NRU3 951 aa15.53■□□□□ 0.08
COL5A1-207ENST00000469093 COL1A1P02452 1464 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-207ENST00000469093 FAM205AQ6ZU69 1335 aa15.52■□□□□ 0.08
COL5A1-207ENST00000469093 ZBTB48P10074 688 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-207ENST00000469093 RASA3Q14644 834 aa15.52■□□□□ 0.08
COL5A1-207ENST00000469093 KAZALD1Q96I82 304 aa15.52■□□□□ 0.08
COL5A1-207ENST00000469093 WNK4Q96J92 1243 aa15.52■□□□□ 0.08
COL5A1-207ENST00000469093 VEZTQ9HBM0 779 aa15.52■□□□□ 0.08
COL5A1-207ENST00000469093 SSC5DA1L4H1 1573 aa15.51■□□□□ 0.07
COL5A1-207ENST00000469093 ANP32CO43423 234 aa15.51■□□□□ 0.07
COL5A1-207ENST00000469093 GYG1P46976 350 aa15.51■□□□□ 0.07
COL5A1-207ENST00000469093 RBM5P52756 815 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL5A1-207ENST00000469093 UBE4AQ14139 1066 aa15.51■□□□□ 0.07
COL5A1-207ENST00000469093 SLC4A10Q6U841 1118 aa15.51■□□□□ 0.07
COL5A1-207ENST00000469093 FAM84BQ96KN1 310 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-207ENST00000469093 PUS3Q9BZE2 481 aaKnown RBP15.51■□□□□ 0.07
COL5A1-207ENST00000469093 TNRC18O15417 2968 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-207ENST00000469093 IGF2BP3O00425 579 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL5A1-207ENST00000469093 HIBADHP31937 336 aaKnown RBP15.5■□□□□ 0.07
COL5A1-207ENST00000469093 MFSD14BQ5SR56 506 aa15.5■□□□□ 0.07
COL5A1-207ENST00000469093 SUCLG2Q96I99 432 aa15.5■□□□□ 0.07
COL5A1-207ENST00000469093 SRCIN1Q9C0H9 1055 aa15.5■□□□□ 0.07
COL5A1-207ENST00000469093 ZNF70Q9UC06 446 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-207ENST00000469093 RIPOR2Q9Y4F9 1068 aa15.5■□□□□ 0.07
COL5A1-207ENST00000469093 NBPF7P0C2Y1 421 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-207ENST00000469093 GJA5P36382 358 aa15.49■□□□□ 0.07
COL5A1-207ENST00000469093 IREB2P48200 963 aaKnown RBP15.49■□□□□ 0.07
COL5A1-207ENST00000469093 SPDYE2Q495Y8 402 aa15.49■□□□□ 0.07
COL5A1-207ENST00000469093 TDRD3Q9H7E2 651 aaKnown RBP15.49■□□□□ 0.07
COL5A1-207ENST00000469093 SERPINA10Q9UK55 444 aa15.49■□□□□ 0.07
COL5A1-207ENST00000469093 TTF2Q9UNY4 1162 aaKnown RBP15.49■□□□□ 0.07
COL5A1-207ENST00000469093 ANKRD13AQ8IZ07 590 aa15.48■□□□□ 0.07
COL5A1-207ENST00000469093 PTPN18Q99952 460 aa15.48■□□□□ 0.07
COL5A1-207ENST00000469093 UTYO14607 1347 aa15.47■□□□□ 0.07
COL5A1-207ENST00000469093 TESPA1A2RU30 521 aaPredicted RBP15.47■□□□□ 0.07
COL5A1-207ENST00000469093 TNFAIP1Q13829 316 aa15.47■□□□□ 0.07
COL5A1-207ENST00000469093 PRPF38BQ5VTL8 546 aaKnown RBP15.47■□□□□ 0.07
COL5A1-207ENST00000469093 OTOP1Q7RTM1 612 aa15.47■□□□□ 0.07
COL5A1-207ENST00000469093 FBXO33Q7Z6M2 555 aa15.47■□□□□ 0.07
COL5A1-207ENST00000469093 DZIP1LQ8IYY4 767 aaKnown RBP15.47■□□□□ 0.07
COL5A1-207ENST00000469093 TEPSINQ96N21 525 aa15.47■□□□□ 0.07
COL5A1-207ENST00000469093 TRIM17Q9Y577 477 aa15.47■□□□□ 0.07
COL5A1-207ENST00000469093 CRHR2Q13324 411 aa15.46■□□□□ 0.07
COL5A1-207ENST00000469093 GRIK5Q16478 980 aa15.46■□□□□ 0.07
COL5A1-207ENST00000469093 OTUD7BQ6GQQ9 843 aa15.46■□□□□ 0.07
COL5A1-207ENST00000469093 CDAN1Q8IWY9 1227 aa15.46■□□□□ 0.07
COL5A1-207ENST00000469093 FAM9BQ8IZU0 186 aa15.46■□□□□ 0.07
COL5A1-207ENST00000469093 MROH5Q6ZUA9 1318 aa15.45■□□□□ 0.06
COL5A1-207ENST00000469093 CRKP46108 304 aa15.45■□□□□ 0.06
COL5A1-207ENST00000469093 RABL6Q3YEC7 729 aaPredicted RBP15.45■□□□□ 0.06
COL5A1-207ENST00000469093 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.45■□□□□ 0.06
COL5A1-207ENST00000469093 MS4A4AQ96JQ5 239 aa15.45■□□□□ 0.06
COL5A1-207ENST00000469093 BICC1Q9H694 974 aaKnown RBP15.45■□□□□ 0.06
COL5A1-207ENST00000469093 ELP3Q9H9T3 547 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms