RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 DONSONQ9NYP3 566 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 GGA1Q9UJY5 639 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.78□□□□□ -1.48
SF3B1-207ENST00000468925 GPRASP1Q5JY77 1395 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 PDS5BQ9NTI5 1447 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 CCDC196A0A1B0GTZ2 297 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 A0A1B0GUL7 405 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 IGHDP01880 384 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 CYP2E1P05181 493 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 CD33P20138 364 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 ATP4AP20648 1035 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 NOP2P46087 812 aaKnown RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 GRIN2CQ14957 1233 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 KIF18AQ8NI77 898 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 MRRFQ96E11 262 aaKnown RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 NOL10Q9BSC4 688 aaKnown RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 UTP14AQ9BVJ6 771 aaKnown RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 NIFKQ9BYG3 293 aaKnown RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 ZCCHC2Q9C0B9 1178 aaKnown RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 LMBRD1Q9NUN5 540 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 ARGLU1Q9NWB6 273 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 PSD3Q9NYI0 1048 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 CABP1Q9NZU7 370 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 ZNF608Q9ULD9 1512 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-207ENST00000468925 KANK1Q14678 1352 aa5.77□□□□□ -1.49
SF3B1-207ENST00000468925 ELP1O95163 1332 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 SYNMO15061 1565 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 POM121CA8CG34 1229 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 NEURL1BA8MQ27 555 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 TMEM229AB2RXF0 380 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 KHNYNO15037 678 aaKnown RBP5.76□□□□□ -1.49
SF3B1-207ENST00000468925 DHX16O60231 1041 aaKnown RBP5.76□□□□□ -1.49
SF3B1-207ENST00000468925 CAVIN2O95810 425 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 NEFHP12036 1026 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 LIG1P18858 919 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 U2AF2P26368 475 aaKnown RBP eCLIP5.76□□□□□ -1.49
SF3B1-207ENST00000468925 SMTNP53814 917 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 WASHC4Q2M389 1173 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 BMP2KLQ5H9B9 411 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 TBCELQ5QJ74 424 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 SUGP1Q8IWZ8 645 aaKnown RBP5.76□□□□□ -1.49
SF3B1-207ENST00000468925 CCDC112Q8NEF3 446 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 KIAA1524Q8TCG1 905 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 KIF1BPQ96EK5 621 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 CEP89Q96ST8 783 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 PLCD4Q9BRC7 762 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 CARD11Q9BXL7 1154 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 SUV39H2Q9H5I1 410 aa5.76□□□□□ -1.49
SF3B1-207ENST00000468925 ATXN7L1Q9ULK2 861 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-207ENST00000468925 A0A1W2PNR3 127 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 CAPN2P17655 700 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 MAP7D1Q3KQU3 841 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 ZMYM1Q5SVZ6 1142 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-207ENST00000468925 TXNDC2Q86VQ3 553 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 WWC1Q8IX03 1113 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 CNPY4Q8N129 248 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 IQUBQ8NA54 791 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 GOLGA5Q8TBA6 731 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 PPM1EQ8WY54 764 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 ERO1AQ96HE7 468 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 CRISPLD1Q9H336 500 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 NDFIP2Q9NV92 336 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 RSPH14Q9UHP6 348 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 GDF2Q9UK05 429 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-207ENST00000468925 CHIC2Q9UKJ5 165 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 GJA3Q9Y6H8 435 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 GRIN2AQ12879 1464 aa5.75□□□□□ -1.49
SF3B1-207ENST00000468925 CCDC171Q6TFL3 1326 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 A6NJY4 79 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 ATXN7O15265 892 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-207ENST00000468925 ZNF853P0CG23 659 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 ERCC3P19447 782 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 COL8A1P27658 744 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 TUBB4BP68371 445 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 GTF2IP78347 998 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 NCBP1Q09161 790 aaKnown RBP5.74□□□□□ -1.49
SF3B1-207ENST00000468925 RAD51AP2Q09MP3 1159 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 NCOA4Q13772 614 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 ZRSR1Q15695 479 aaKnown RBP5.74□□□□□ -1.49
SF3B1-207ENST00000468925 ZKSCAN8Q15776 578 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-207ENST00000468925 EML3Q32P44 896 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 MCTP1Q6DN14 999 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 BICDL1Q6ZP65 573 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 EGFL6Q8IUX8 553 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.74□□□□□ -1.49
SF3B1-207ENST00000468925 SREK1Q8WXA9 508 aaKnown RBP5.74□□□□□ -1.49
SF3B1-207ENST00000468925 DRC1Q96MC2 740 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 DNAAF2Q9NVR5 837 aaKnown RBP5.74□□□□□ -1.49
SF3B1-207ENST00000468925 HCN2Q9UL51 889 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 MKL2Q9ULH7 1088 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 DDX19BQ9UMR2 479 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-207ENST00000468925 PCDHGC4Q9Y5F7 938 aa5.74□□□□□ -1.49
SF3B1-207ENST00000468925 CUL7Q14999 1698 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 CCDC141Q6ZP82 1450 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 LMTK3Q96Q04 1460 aa5.73□□□□□ -1.49
SF3B1-207ENST00000468925 COL17A1Q9UMD9 1497 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-207ENST00000468925 CADPSQ9ULU8 1353 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms