RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 FSD1Q9BTV5 496 aa21.24■□□□□ 0.99
RPL39-202ENST00000468844 ZC3H12CQ9C0D7 883 aaKnown RBP21.24■□□□□ 0.99
RPL39-202ENST00000468844 MAST2Q6P0Q8 1798 aa21.24■□□□□ 0.99
RPL39-202ENST00000468844 SEMA3EO15041 775 aa21.23■□□□□ 0.99
RPL39-202ENST00000468844 ZBTB22O15209 634 aa21.23■□□□□ 0.99
RPL39-202ENST00000468844 SOGA3Q5TF21 947 aa21.23■□□□□ 0.99
RPL39-202ENST00000468844 TDRD7Q8NHU6 1098 aaKnown RBP21.23■□□□□ 0.99
RPL39-202ENST00000468844 PSMD1Q99460 953 aa21.23■□□□□ 0.99
RPL39-202ENST00000468844 EYA3Q99504 573 aa21.23■□□□□ 0.99
RPL39-202ENST00000468844 CD209Q9NNX6 404 aa21.23■□□□□ 0.99
RPL39-202ENST00000468844 RBM19Q9Y4C8 960 aaKnown RBP21.23■□□□□ 0.99
RPL39-202ENST00000468844 DICER1Q9UPY3 1922 aaKnown RBP21.23■□□□□ 0.99
RPL39-202ENST00000468844 CHMLP26374 656 aa21.23■□□□□ 0.99
RPL39-202ENST00000468844 DENND2AQ9ULE3 1009 aa21.23■□□□□ 0.99
RPL39-202ENST00000468844 FRAT2O75474 233 aaPredicted RBP21.22■□□□□ 0.99
RPL39-202ENST00000468844 IL1R1P14778 569 aa21.22■□□□□ 0.99
RPL39-202ENST00000468844 RFX7Q2KHR2 1363 aa21.22■□□□□ 0.99
RPL39-202ENST00000468844 MYH2Q9UKX2 1941 aa21.22■□□□□ 0.99
RPL39-202ENST00000468844 PDS5AQ29RF7 1337 aaKnown RBP21.22■□□□□ 0.99
RPL39-202ENST00000468844 COL4A5P29400 1685 aa21.21■□□□□ 0.99
RPL39-202ENST00000468844 SEC24BO95487 1268 aa21.21■□□□□ 0.99
RPL39-202ENST00000468844 CHGBP05060 677 aa21.21■□□□□ 0.99
RPL39-202ENST00000468844 PIH1D3Q9NQM4 214 aaKnown RBP21.21■□□□□ 0.99
RPL39-202ENST00000468844 KIAA2012Q0VF49 1180 aa21.2■□□□□ 0.98
RPL39-202ENST00000468844 TTF1Q15361 905 aaPredicted RBP21.2■□□□□ 0.98
RPL39-202ENST00000468844 SUPT20HQ8NEM7 779 aa21.2■□□□□ 0.98
RPL39-202ENST00000468844 COA1Q9GZY4 146 aa21.2■□□□□ 0.98
RPL39-202ENST00000468844 JAG2Q9Y219 1238 aa21.2■□□□□ 0.98
RPL39-202ENST00000468844 AOC3Q16853 763 aa21.19■□□□□ 0.98
RPL39-202ENST00000468844 DOK7Q18PE1 504 aa21.19■□□□□ 0.98
RPL39-202ENST00000468844 IL25Q9H293 177 aa21.19■□□□□ 0.98
RPL39-202ENST00000468844 NFKBIEO00221 500 aa21.18■□□□□ 0.98
RPL39-202ENST00000468844 CHAF1AQ13111 956 aaPredicted RBP21.18■□□□□ 0.98
RPL39-202ENST00000468844 CASC1Q6TDU7 716 aa21.18■□□□□ 0.98
RPL39-202ENST00000468844 DBNDD1Q9H9R9 158 aa21.18■□□□□ 0.98
RPL39-202ENST00000468844 PPIP5K2O43314 1243 aa21.17■□□□□ 0.98
RPL39-202ENST00000468844 CWC27Q6UX04 472 aaKnown RBP21.17■□□□□ 0.98
RPL39-202ENST00000468844 ZNF277Q9NRM2 450 aaPredicted RBP21.17■□□□□ 0.98
RPL39-202ENST00000468844 DIAPH3Q9NSV4 1193 aa21.17■□□□□ 0.98
RPL39-202ENST00000468844 IDH1O75874 414 aaKnown RBP21.17■□□□□ 0.98
RPL39-202ENST00000468844 SLFNL1Q499Z3 407 aa21.17■□□□□ 0.98
RPL39-202ENST00000468844 FAM227BQ96M60 508 aa21.17■□□□□ 0.98
RPL39-202ENST00000468844 TAOK3Q9H2K8 898 aa21.17■□□□□ 0.98
RPL39-202ENST00000468844 ABCF2Q9UG63 623 aa21.17■□□□□ 0.98
RPL39-202ENST00000468844 HIP1O00291 1037 aa21.16■□□□□ 0.98
RPL39-202ENST00000468844 NMIQ13287 307 aaPredicted RBP21.16■□□□□ 0.98
RPL39-202ENST00000468844 TICAM2Q86XR7 235 aa21.16■□□□□ 0.98
RPL39-202ENST00000468844 A0A0D9SFI3 127 aa21.16■□□□□ 0.98
RPL39-202ENST00000468844 PODNQ7Z5L7 613 aa21.16■□□□□ 0.98
RPL39-202ENST00000468844 ESYT1Q9BSJ8 1104 aa21.16■□□□□ 0.98
RPL39-202ENST00000468844 SALL1Q9NSC2 1324 aa21.15■□□□□ 0.98
RPL39-202ENST00000468844 ECE2O60344 883 aa21.15■□□□□ 0.98
RPL39-202ENST00000468844 G3V3G9 751 aa21.14■□□□□ 0.98
RPL39-202ENST00000468844 RNF113AO15541 343 aaKnown RBP21.14■□□□□ 0.98
RPL39-202ENST00000468844 SLC9C2Q5TAH2 1124 aa21.14■□□□□ 0.98
RPL39-202ENST00000468844 DCAF8Q5TAQ9 597 aa21.14■□□□□ 0.98
RPL39-202ENST00000468844 WDR66Q8TBY9 1149 aa21.14■□□□□ 0.98
RPL39-202ENST00000468844 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.14■□□□□ 0.98
RPL39-202ENST00000468844 LRP2BPQ9P2M1 347 aa21.14■□□□□ 0.98
RPL39-202ENST00000468844 CDK5RAP2Q96SN8 1893 aa21.14■□□□□ 0.97
RPL39-202ENST00000468844 FAM205AQ6ZU69 1335 aa21.14■□□□□ 0.97
RPL39-202ENST00000468844 SGSM2O43147 1006 aa21.14■□□□□ 0.97
RPL39-202ENST00000468844 PRDX5P30044 214 aa21.14■□□□□ 0.97
RPL39-202ENST00000468844 ADD2P35612 726 aa21.14■□□□□ 0.97
RPL39-202ENST00000468844 GTF2IP78347 998 aa21.14■□□□□ 0.97
RPL39-202ENST00000468844 MAP3K12Q12852 859 aa21.14■□□□□ 0.97
RPL39-202ENST00000468844 VPS33BQ9H267 617 aa21.14■□□□□ 0.97
RPL39-202ENST00000468844 KCNQ5Q9NR82 932 aa21.14■□□□□ 0.97
RPL39-202ENST00000468844 LTBP3Q9NS15 1303 aa21.13■□□□□ 0.97
RPL39-202ENST00000468844 ADAMTSL1Q8N6G6 1762 aa21.13■□□□□ 0.97
RPL39-202ENST00000468844 ZFYP08048 801 aaPredicted RBP21.13■□□□□ 0.97
RPL39-202ENST00000468844 IARSP41252 1262 aaKnown RBP21.13■□□□□ 0.97
RPL39-202ENST00000468844 LRRFIP1Q32MZ4 808 aaKnown RBP21.13■□□□□ 0.97
RPL39-202ENST00000468844 LARGE2Q8N3Y3 721 aa21.13■□□□□ 0.97
RPL39-202ENST00000468844 SEC62Q99442 399 aaKnown RBP21.13■□□□□ 0.97
RPL39-202ENST00000468844 PDE6AP16499 860 aa21.12■□□□□ 0.97
RPL39-202ENST00000468844 MFAP1P55081 439 aaKnown RBP21.12■□□□□ 0.97
RPL39-202ENST00000468844 RASSF7Q02833 373 aa21.12■□□□□ 0.97
RPL39-202ENST00000468844 ZNF384Q8TF68 577 aa21.12■□□□□ 0.97
RPL39-202ENST00000468844 TCRBV5S4A2TA0A5A2 114 aa21.12■□□□□ 0.97
RPL39-202ENST00000468844 YDJCA8MPS7 323 aa21.12■□□□□ 0.97
RPL39-202ENST00000468844 MFSD14BQ5SR56 506 aa21.12■□□□□ 0.97
RPL39-202ENST00000468844 ZMYM1Q5SVZ6 1142 aa21.12■□□□□ 0.97
RPL39-202ENST00000468844 ZSCAN25Q6NSZ9 544 aa21.12■□□□□ 0.97
RPL39-202ENST00000468844 ZGPATQ8N5A5 531 aaKnown RBP21.12■□□□□ 0.97
RPL39-202ENST00000468844 MAGEB6Q8N7X4 407 aa21.12■□□□□ 0.97
RPL39-202ENST00000468844 RAD50Q92878 1312 aa21.11■□□□□ 0.97
RPL39-202ENST00000468844 ZNF532Q9HCE3 1301 aa21.11■□□□□ 0.97
RPL39-202ENST00000468844 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
RPL39-202ENST00000468844 GRIK5Q16478 980 aa21.11■□□□□ 0.97
RPL39-202ENST00000468844 TTLL5Q6EMB2 1281 aa21.11■□□□□ 0.97
RPL39-202ENST00000468844 ERICH6Q7L0X2 663 aa21.11■□□□□ 0.97
RPL39-202ENST00000468844 RUFY2Q8WXA3 655 aa21.11■□□□□ 0.97
RPL39-202ENST00000468844 RAI14Q9P0K7 980 aa21.11■□□□□ 0.97
RPL39-202ENST00000468844 PRELPP51888 382 aa21.1■□□□□ 0.97
RPL39-202ENST00000468844 ZNF589Q86UQ0 364 aaPredicted RBP21.1■□□□□ 0.97
RPL39-202ENST00000468844 TBC1D22AQ8WUA7 517 aa21.1■□□□□ 0.97
RPL39-202ENST00000468844 OSBP2Q969R2 916 aa21.1■□□□□ 0.97
RPL39-202ENST00000468844 NSUN4Q96CB9 384 aaKnown RBP21.1■□□□□ 0.97
RPL39-202ENST00000468844 TIAM2Q8IVF5 1701 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms