RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 TBC1D22AQ8WUA7 517 aa13.77□□□□□ -0.21
MSH5-214ENST00000468602 HAUS7Q99871 368 aa13.77□□□□□ -0.21
MSH5-214ENST00000468602 MRIQ9BWK5 157 aa13.77□□□□□ -0.21
MSH5-214ENST00000468602 ZNF277Q9NRM2 450 aaPredicted RBP13.77□□□□□ -0.21
MSH5-214ENST00000468602 GOLGB1Q14789 3259 aaKnown RBP13.77□□□□□ -0.21
MSH5-214ENST00000468602 MYH13Q9UKX3 1938 aa13.76□□□□□ -0.21
MSH5-214ENST00000468602 YDJCA8MPS7 323 aa13.76□□□□□ -0.21
MSH5-214ENST00000468602 ECE2O60344 883 aa13.76□□□□□ -0.21
MSH5-214ENST00000468602 VIL1P09327 827 aaKnown RBP13.76□□□□□ -0.21
MSH5-214ENST00000468602 MCAMP43121 646 aa13.76□□□□□ -0.21
MSH5-214ENST00000468602 WDR66Q8TBY9 1149 aa13.76□□□□□ -0.21
MSH5-214ENST00000468602 JDP2Q8WYK2 163 aa13.76□□□□□ -0.21
MSH5-214ENST00000468602 HMG20BQ9P0W2 317 aa13.76□□□□□ -0.21
MSH5-214ENST00000468602 COL1A1P02452 1464 aaPredicted RBP13.75□□□□□ -0.21
MSH5-214ENST00000468602 RFX7Q2KHR2 1363 aa13.75□□□□□ -0.21
MSH5-214ENST00000468602 MYO3BQ8WXR4 1341 aa13.75□□□□□ -0.21
MSH5-214ENST00000468602 RASSF7Q02833 373 aa13.75□□□□□ -0.21
MSH5-214ENST00000468602 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
MSH5-214ENST00000468602 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
MSH5-214ENST00000468602 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
MSH5-214ENST00000468602 NIM1KQ8IY84 436 aa13.75□□□□□ -0.21
MSH5-214ENST00000468602 SPATA5Q8NB90 893 aa13.75□□□□□ -0.21
MSH5-214ENST00000468602 GPR101Q96P66 508 aaPredicted RBP13.75□□□□□ -0.21
MSH5-214ENST00000468602 DOCK2Q92608 1830 aa13.75□□□□□ -0.21
MSH5-214ENST00000468602 USP17L3A6NCW0 530 aa13.74□□□□□ -0.21
MSH5-214ENST00000468602 USP17L4A6NCW7 530 aa13.74□□□□□ -0.21
MSH5-214ENST00000468602 TTF1Q15361 905 aaPredicted RBP13.74□□□□□ -0.21
MSH5-214ENST00000468602 DACT2Q5SW24 774 aa13.74□□□□□ -0.21
MSH5-214ENST00000468602 USP17L1Q7RTZ2 530 aa13.74□□□□□ -0.21
MSH5-214ENST00000468602 ZGPATQ8N5A5 531 aaKnown RBP13.74□□□□□ -0.21
MSH5-214ENST00000468602 AGBL3Q8NEM8 1001 aa13.74□□□□□ -0.21
MSH5-214ENST00000468602 GMLQ99445 158 aa13.74□□□□□ -0.21
MSH5-214ENST00000468602 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
MSH5-214ENST00000468602 RPS12P25398 132 aaKnown RBP13.73□□□□□ -0.21
MSH5-214ENST00000468602 HDLBPQ00341 1268 aaKnown RBP13.73□□□□□ -0.21
MSH5-214ENST00000468602 SCARF1Q14162 830 aa13.73□□□□□ -0.21
MSH5-214ENST00000468602 TNIP1Q15025 636 aa13.73□□□□□ -0.21
MSH5-214ENST00000468602 BMP2KLQ5H9B9 411 aa13.73□□□□□ -0.21
MSH5-214ENST00000468602 TTC22Q5TAA0 569 aa13.73□□□□□ -0.21
MSH5-214ENST00000468602 DPF2Q92785 391 aa13.73□□□□□ -0.21
MSH5-214ENST00000468602 TIAM2Q8IVF5 1701 aa13.73□□□□□ -0.21
MSH5-214ENST00000468602 CYP2E1P05181 493 aaPredicted RBP13.72□□□□□ -0.21
MSH5-214ENST00000468602 CXCL9Q07325 125 aa13.72□□□□□ -0.21
MSH5-214ENST00000468602 C9orf131Q5VYM1 1079 aa13.72□□□□□ -0.21
MSH5-214ENST00000468602 TTLL5Q6EMB2 1281 aa13.72□□□□□ -0.21
MSH5-214ENST00000468602 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
MSH5-214ENST00000468602 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
MSH5-214ENST00000468602 WWC3Q9ULE0 1092 aa13.72□□□□□ -0.21
MSH5-214ENST00000468602 ZAP70P43403 619 aa13.71□□□□□ -0.21
MSH5-214ENST00000468602 DOK7Q18PE1 504 aa13.71□□□□□ -0.21
MSH5-214ENST00000468602 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
MSH5-214ENST00000468602 CIAPIN1Q6FI81 312 aa13.71□□□□□ -0.21
MSH5-214ENST00000468602 GPC2Q8N158 579 aa13.71□□□□□ -0.21
MSH5-214ENST00000468602 KBTBD3Q8NAB2 608 aa13.71□□□□□ -0.21
MSH5-214ENST00000468602 EVI5LQ96CN4 794 aa13.71□□□□□ -0.21
MSH5-214ENST00000468602 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.21
MSH5-214ENST00000468602 PAG1Q9NWQ8 432 aa13.71□□□□□ -0.21
MSH5-214ENST00000468602 G3V3G9 751 aa13.7□□□□□ -0.22
MSH5-214ENST00000468602 GSPT1P15170 499 aaKnown RBP13.7□□□□□ -0.22
MSH5-214ENST00000468602 EIF6P56537 245 aaKnown RBP13.7□□□□□ -0.22
MSH5-214ENST00000468602 GTF2IP78347 998 aa13.7□□□□□ -0.22
MSH5-214ENST00000468602 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
MSH5-214ENST00000468602 RSBN1LQ6PCB5 846 aaPredicted RBP13.7□□□□□ -0.22
MSH5-214ENST00000468602 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
MSH5-214ENST00000468602 RNF181Q9P0P0 153 aa13.7□□□□□ -0.22
MSH5-214ENST00000468602 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
MSH5-214ENST00000468602 MAST3O60307 1309 aa13.69□□□□□ -0.22
MSH5-214ENST00000468602 MAST2Q6P0Q8 1798 aa13.69□□□□□ -0.22
MSH5-214ENST00000468602 PSMD14O00487 310 aa13.69□□□□□ -0.22
MSH5-214ENST00000468602 HSPA6P17066 643 aa13.69□□□□□ -0.22
MSH5-214ENST00000468602 LRRFIP1Q32MZ4 808 aaKnown RBP13.69□□□□□ -0.22
MSH5-214ENST00000468602 MFSD14BQ5SR56 506 aa13.69□□□□□ -0.22
MSH5-214ENST00000468602 PELP1Q8IZL8 1130 aaKnown RBP13.69□□□□□ -0.22
MSH5-214ENST00000468602 CERS5Q8N5B7 392 aa13.69□□□□□ -0.22
MSH5-214ENST00000468602 MTMR14Q8NCE2 650 aa13.69□□□□□ -0.22
MSH5-214ENST00000468602 KCNQ5Q9NR82 932 aa13.69□□□□□ -0.22
MSH5-214ENST00000468602 MYH7P12883 1935 aa13.68□□□□□ -0.22
MSH5-214ENST00000468602 MAP4K4O95819 1239 aaPredicted RBP13.68□□□□□ -0.22
MSH5-214ENST00000468602 ZFYP08048 801 aaPredicted RBP13.68□□□□□ -0.22
MSH5-214ENST00000468602 ZNF280AP59817 542 aaPredicted RBP13.68□□□□□ -0.22
MSH5-214ENST00000468602 UBE3CQ15386 1083 aa13.68□□□□□ -0.22
MSH5-214ENST00000468602 HHIPL2Q6UWX4 724 aa13.68□□□□□ -0.22
MSH5-214ENST00000468602 PI16Q6UXB8 463 aa13.68□□□□□ -0.22
MSH5-214ENST00000468602 CERS3Q8IU89 383 aa13.68□□□□□ -0.22
MSH5-214ENST00000468602 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
MSH5-214ENST00000468602 SNRKQ9NRH2 765 aa13.68□□□□□ -0.22
MSH5-214ENST00000468602 WDR90Q96KV7 1748 aa13.67□□□□□ -0.22
MSH5-214ENST00000468602 GAKO14976 1311 aa13.67□□□□□ -0.22
MSH5-214ENST00000468602 ZNF541Q9H0D2 1346 aa13.67□□□□□ -0.22
MSH5-214ENST00000468602 GLTPD2A6NH11 291 aa13.67□□□□□ -0.22
MSH5-214ENST00000468602 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
MSH5-214ENST00000468602 TSHZ3Q63HK5 1081 aa13.67□□□□□ -0.22
MSH5-214ENST00000468602 ZSCAN25Q6NSZ9 544 aa13.67□□□□□ -0.22
MSH5-214ENST00000468602 ZNF384Q8TF68 577 aa13.67□□□□□ -0.22
MSH5-214ENST00000468602 NSUN4Q96CB9 384 aaKnown RBP13.67□□□□□ -0.22
MSH5-214ENST00000468602 ZBED3Q96IU2 234 aaPredicted RBP13.67□□□□□ -0.22
MSH5-214ENST00000468602 ANTXR1Q9H6X2 564 aa13.67□□□□□ -0.22
MSH5-214ENST00000468602 PIH1D3Q9NQM4 214 aaKnown RBP13.67□□□□□ -0.22
MSH5-214ENST00000468602 SERPINA10Q9UK55 444 aa13.67□□□□□ -0.22
MSH5-214ENST00000468602 SCN4AP35499 1836 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms