RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 PSMD14O00487 310 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 KIF3CO14782 793 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 HMMRO75330 724 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 PDE8BO95263 885 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 IFIT1P09914 478 aaKnown RBP4.49□□□□□ -1.69
COMMD3-207ENST00000468469 GYG1P46976 350 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 SCNN1DP51172 638 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 CXCL9Q07325 125 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 OS9Q13438 667 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-207ENST00000468469 UBE4AQ14139 1066 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 TNIP1Q15025 636 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 ATP2B3Q16720 1220 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 CAVIN4Q5BKX8 364 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 C15orf52Q6ZUT6 534 aaKnown RBP4.49□□□□□ -1.69
COMMD3-207ENST00000468469 ATG9AQ7Z3C6 839 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 PODNQ7Z5L7 613 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 TXNRD3Q86VQ6 643 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 VPS37DQ86XT2 251 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 IFNL1Q8IU54 200 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 C16orf71Q8IYS4 520 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-207ENST00000468469 SSH3Q8TE77 659 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 CRBNQ96SW2 442 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 TMEM106CQ9BVX2 250 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 RRAGCQ9HB90 399 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 ZBTB40Q9NUA8 1239 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 CEP126Q9P2H0 1117 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 HACL1Q9UJ83 578 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 ADAMTSL1Q8N6G6 1762 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 SRCAPQ6ZRS2 3230 aa4.49□□□□□ -1.69
COMMD3-207ENST00000468469 COL1A1P02452 1464 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-207ENST00000468469 ZNF646O15015 1829 aaPredicted RBP4.49□□□□□ -1.69
COMMD3-207ENST00000468469 MYO3BQ8WXR4 1341 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 CCDC88AQ3V6T2 1871 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 USP17L3A6NCW0 530 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 USP17L4A6NCW7 530 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 SURF6O75683 361 aaKnown RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 IL1R1P14778 569 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 VEGFAP15692 232 aaPredicted RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 FGFR2P21802 821 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 RPS12P25398 132 aaKnown RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 HIBADHP31937 336 aaKnown RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 EPHX2P34913 555 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 GMPSP49915 693 aaPredicted RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 ATP8B2P98198 1209 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 TFCP2Q12800 502 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 G3BP1Q13283 466 aaKnown RBP eCLIP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 EAPPQ56P03 285 aaPredicted RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 RSBN1LQ6PCB5 846 aaPredicted RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 USP17L1Q7RTZ2 530 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 ERC1Q8IUD2 1116 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 RPAP2Q8IXW5 612 aaPredicted RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 MICALL2Q8IY33 904 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 LPIN2Q92539 896 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 HS3ST6Q96QI5 342 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 TAF1DQ9H5J8 278 aaPredicted RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 CD209Q9NNX6 404 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 GPRC5DQ9NZD1 345 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.48□□□□□ -1.69
COMMD3-207ENST00000468469 EXOC6BQ9Y2D4 811 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 AKAP2Q9Y2D5 859 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 SCN4AP35499 1836 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 PSME4Q14997 1843 aa4.48□□□□□ -1.69
COMMD3-207ENST00000468469 A0A1B0GUL7 405 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 POTECB2RU33 542 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 APBB1O00213 710 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 FRAT2O75474 233 aaPredicted RBP4.47□□□□□ -1.69
COMMD3-207ENST00000468469 TOMM70O94826 608 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 VIL1P09327 827 aaKnown RBP4.47□□□□□ -1.69
COMMD3-207ENST00000468469 EPS15P42566 896 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 GTF2IP78347 998 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 CHAF1AQ13111 956 aaPredicted RBP4.47□□□□□ -1.69
COMMD3-207ENST00000468469 KIF4BQ2VIQ3 1234 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 HSP90AB4PQ58FF6 505 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 DACT2Q5SW24 774 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 STRIP1Q5VSL9 837 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 PNMA8AQ86V59 439 aaPredicted RBP4.47□□□□□ -1.69
COMMD3-207ENST00000468469 LDHDQ86WU2 507 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 SMC1BQ8NDV3 1235 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 AGBL3Q8NEM8 1001 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 RBM46Q8TBY0 533 aaKnown RBP4.47□□□□□ -1.69
COMMD3-207ENST00000468469 FAM84BQ96KN1 310 aaPredicted RBP4.47□□□□□ -1.69
COMMD3-207ENST00000468469 MXD3Q9BW11 206 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 KCNQ5Q9NR82 932 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 ADARB2Q9NS39 739 aaKnown RBP4.47□□□□□ -1.69
COMMD3-207ENST00000468469 JAG2Q9Y219 1238 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 NOP58Q9Y2X3 529 aaKnown RBP4.47□□□□□ -1.69
COMMD3-207ENST00000468469 SUPT16HQ9Y5B9 1047 aaKnown RBP4.47□□□□□ -1.69
COMMD3-207ENST00000468469 SCN9AQ15858 1988 aa4.47□□□□□ -1.69
COMMD3-207ENST00000468469 MAST2Q6P0Q8 1798 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 SHTN1A0MZ66 631 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 FAM205CA6NFA0 338 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 H7C1D1 291 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 SEMA3EO15041 775 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 SASH1O94885 1247 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 USP17L8P0C7I0 530 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 ADORA1P30542 326 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 PHKA1P46020 1223 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 BCAMP50895 628 aa4.46□□□□□ -1.7
COMMD3-207ENST00000468469 FKBP1AP62942 108 aaKnown RBP4.46□□□□□ -1.7
COMMD3-207ENST00000468469 TNNI3KQ59H18 835 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms