RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 UTYO14607 1347 aa16.89■□□□□ 0.29
C9orf3-212ENST00000468164 FAM155AB1AL88 458 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-212ENST00000468164 UBE2Q2LH0YL09 131 aa16.88■□□□□ 0.29
C9orf3-212ENST00000468164 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
C9orf3-212ENST00000468164 IL1R1P14778 569 aa16.88■□□□□ 0.29
C9orf3-212ENST00000468164 RBM5P52756 815 aaKnown RBP eCLIP16.88■□□□□ 0.292e-7■■■■□ 26.1
C9orf3-212ENST00000468164 KIF23Q02241 960 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-212ENST00000468164 ALDH1L2Q3SY69 923 aa16.88■□□□□ 0.29
C9orf3-212ENST00000468164 ANKRD44Q8N8A2 993 aa16.88■□□□□ 0.29
C9orf3-212ENST00000468164 KLHDC4Q8TBB5 520 aa16.88■□□□□ 0.29
C9orf3-212ENST00000468164 CA12O43570 354 aa16.87■□□□□ 0.29
C9orf3-212ENST00000468164 NF2P35240 595 aa16.87■□□□□ 0.29
C9orf3-212ENST00000468164 LRRC24Q50LG9 513 aa16.87■□□□□ 0.29
C9orf3-212ENST00000468164 METTL24Q5JXM2 366 aa16.87■□□□□ 0.29
C9orf3-212ENST00000468164 IQSEC3Q9UPP2 1182 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-212ENST00000468164 PCDHAC2Q9Y5I4 1007 aa16.87■□□□□ 0.29
C9orf3-212ENST00000468164 SLC10A3P09131 477 aa16.86■□□□□ 0.29
C9orf3-212ENST00000468164 HIBADHP31937 336 aaKnown RBP16.86■□□□□ 0.29
C9orf3-212ENST00000468164 UBE4AQ14139 1066 aa16.86■□□□□ 0.29
C9orf3-212ENST00000468164 RABL6Q3YEC7 729 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-212ENST00000468164 VPS37DQ86XT2 251 aa16.86■□□□□ 0.29
C9orf3-212ENST00000468164 APOBEC3FQ8IUX4 373 aaKnown RBP16.86■□□□□ 0.29
C9orf3-212ENST00000468164 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
C9orf3-212ENST00000468164 MROH5Q6ZUA9 1318 aa16.86■□□□□ 0.29
C9orf3-212ENST00000468164 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
C9orf3-212ENST00000468164 CLRN2A0PK11 232 aa16.85■□□□□ 0.29
C9orf3-212ENST00000468164 FRAT2O75474 233 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-212ENST00000468164 MMP14P50281 582 aa16.85■□□□□ 0.29
C9orf3-212ENST00000468164 FKBP1BP68106 108 aa16.85■□□□□ 0.29
C9orf3-212ENST00000468164 CFAP100Q494V2 611 aa16.85■□□□□ 0.29
C9orf3-212ENST00000468164 RASAL3Q86YV0 1011 aa16.85■□□□□ 0.29
C9orf3-212ENST00000468164 VEZTQ9HBM0 779 aa16.85■□□□□ 0.29
C9orf3-212ENST00000468164 NOB1Q9ULX3 412 aaKnown RBP16.85■□□□□ 0.29
C9orf3-212ENST00000468164 RIPOR2Q9Y4F9 1068 aa16.85■□□□□ 0.29
C9orf3-212ENST00000468164 MYO1BO43795 1136 aa16.84■□□□□ 0.29
C9orf3-212ENST00000468164 TRPA1O75762 1119 aa16.84■□□□□ 0.29
C9orf3-212ENST00000468164 MKRN3Q13064 507 aaKnown RBP16.84■□□□□ 0.29
C9orf3-212ENST00000468164 CHAF1AQ13111 956 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-212ENST00000468164 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
C9orf3-212ENST00000468164 TRMT2AQ8IZ69 625 aaKnown RBP16.84■□□□□ 0.29
C9orf3-212ENST00000468164 FAM84BQ96KN1 310 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-212ENST00000468164 FZD1Q9UP38 647 aa16.84■□□□□ 0.29
C9orf3-212ENST00000468164 ABHD8Q96I13 439 aa16.83■□□□□ 0.28
C9orf3-212ENST00000468164 ZBED3Q96IU2 234 aaPredicted RBP16.83■□□□□ 0.28
C9orf3-212ENST00000468164 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
C9orf3-212ENST00000468164 TTF2Q9UNY4 1162 aaKnown RBP16.83■□□□□ 0.28
C9orf3-212ENST00000468164 OTOFQ9HC10 1997 aa16.82■□□□□ 0.28
C9orf3-212ENST00000468164 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-212ENST00000468164 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
C9orf3-212ENST00000468164 TDRD7Q8NHU6 1098 aaKnown RBP16.82■□□□□ 0.28
C9orf3-212ENST00000468164 CSRNP1Q96S65 589 aa16.82■□□□□ 0.28
C9orf3-212ENST00000468164 DEFB129Q9H1M3 183 aa16.82■□□□□ 0.28
C9orf3-212ENST00000468164 ANGEL1Q9UNK9 670 aaKnown RBP16.82■□□□□ 0.28
C9orf3-212ENST00000468164 AOX1Q06278 1338 aa16.81■□□□□ 0.28
C9orf3-212ENST00000468164 FAM205AQ6ZU69 1335 aa16.81■□□□□ 0.28
C9orf3-212ENST00000468164 SPDYE2BA6NHP3 402 aa16.81■□□□□ 0.28
C9orf3-212ENST00000468164 PDE8BO95263 885 aa16.81■□□□□ 0.28
C9orf3-212ENST00000468164 SPDYE6P0CI01 402 aa16.81■□□□□ 0.28
C9orf3-212ENST00000468164 FKBP1AP62942 108 aaKnown RBP16.81■□□□□ 0.28
C9orf3-212ENST00000468164 ARMC9Q7Z3E5 817 aa16.81■□□□□ 0.28
C9orf3-212ENST00000468164 API5Q9BZZ5 524 aaKnown RBP16.81■□□□□ 0.28
C9orf3-212ENST00000468164 SIL1Q9H173 461 aa16.81■□□□□ 0.28
C9orf3-212ENST00000468164 RNF186Q9NXI6 227 aa16.81■□□□□ 0.28
C9orf3-212ENST00000468164 COL1A1P02452 1464 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-212ENST00000468164 CT47B1P0C2W7 299 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-212ENST00000468164 MTMR14Q8NCE2 650 aa16.8■□□□□ 0.28
C9orf3-212ENST00000468164 CCDC85CA6NKD9 419 aa16.79■□□□□ 0.28
C9orf3-212ENST00000468164 BCAMP50895 628 aa16.79■□□□□ 0.28
C9orf3-212ENST00000468164 PTPN12Q05209 780 aaKnown RBP16.79■□□□□ 0.28
C9orf3-212ENST00000468164 DGKZQ13574 1117 aa16.79■□□□□ 0.28
C9orf3-212ENST00000468164 VGLL2Q8N8G2 317 aa16.79■□□□□ 0.28
C9orf3-212ENST00000468164 EYA2O00167 538 aa16.78■□□□□ 0.28
C9orf3-212ENST00000468164 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
C9orf3-212ENST00000468164 RARSP54136 660 aaKnown RBP16.78■□□□□ 0.28
C9orf3-212ENST00000468164 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
C9orf3-212ENST00000468164 GRIK5Q16478 980 aa16.78■□□□□ 0.28
C9orf3-212ENST00000468164 FBXO33Q7Z6M2 555 aa16.78■□□□□ 0.28
C9orf3-212ENST00000468164 TDRD3Q9H7E2 651 aaKnown RBP16.78■□□□□ 0.28
C9orf3-212ENST00000468164 SAGE1Q9NXZ1 904 aa16.78■□□□□ 0.28
C9orf3-212ENST00000468164 LRRFIP2Q9Y608 721 aaKnown RBP16.78■□□□□ 0.28
C9orf3-212ENST00000468164 MYH2Q9UKX2 1941 aa16.77■□□□□ 0.28
C9orf3-212ENST00000468164 SLC5A1P13866 664 aa16.77■□□□□ 0.28
C9orf3-212ENST00000468164 CRKP46108 304 aa16.77■□□□□ 0.28
C9orf3-212ENST00000468164 RFX5P48382 616 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-212ENST00000468164 NBPF12Q5TAG4 269 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-212ENST00000468164 FRAT1Q92837 279 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-212ENST00000468164 MCOLN1Q9GZU1 580 aa16.77■□□□□ 0.28
C9orf3-212ENST00000468164 SSC5DA1L4H1 1573 aa16.77■□□□□ 0.27
C9orf3-212ENST00000468164 KIF16BQ96L93 1317 aa16.76■□□□□ 0.27
C9orf3-212ENST00000468164 PPP1R12BO60237 982 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-212ENST00000468164 RASA3Q14644 834 aa16.76■□□□□ 0.27
C9orf3-212ENST00000468164 SUPT20HL1Q3ZLR7 823 aa16.76■□□□□ 0.27
C9orf3-212ENST00000468164 REM2Q8IYK8 340 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-212ENST00000468164 DZIP1LQ8IYY4 767 aaKnown RBP16.76■□□□□ 0.27
C9orf3-212ENST00000468164 MIER1Q8N108 512 aa16.76■□□□□ 0.27
C9orf3-212ENST00000468164 MEIS3Q99687 375 aa16.76■□□□□ 0.27
C9orf3-212ENST00000468164 ZNF70Q9UC06 446 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-212ENST00000468164 SERPINA10Q9UK55 444 aa16.76■□□□□ 0.27
C9orf3-212ENST00000468164 PPP2R3BQ9Y5P8 575 aa16.76■□□□□ 0.27
C9orf3-212ENST00000468164 LAMB1P07942 1786 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms