RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 CCDC9Q9Y3X0 531 aaKnown RBP7.39□□□□□ -1.23
U2AF1-207ENST00000468039 NLRP1Q9C000 1473 aa7.38□□□□□ -1.23
U2AF1-207ENST00000468039 NOS1P29475 1434 aa7.38□□□□□ -1.23
U2AF1-207ENST00000468039 SETD5Q9C0A6 1442 aa7.38□□□□□ -1.23
U2AF1-207ENST00000468039 RAB3GAP2Q9H2M9 1393 aa7.38□□□□□ -1.23
U2AF1-207ENST00000468039 PAX4O43316 350 aa7.38□□□□□ -1.23
U2AF1-207ENST00000468039 SCNN1AP37088 669 aa7.38□□□□□ -1.23
U2AF1-207ENST00000468039 CTBSQ01459 385 aa7.38□□□□□ -1.23
U2AF1-207ENST00000468039 BCS1LQ9Y276 419 aa7.38□□□□□ -1.23
U2AF1-207ENST00000468039 SETD1BQ9UPS6 1966 aaKnown RBP7.38□□□□□ -1.23
U2AF1-207ENST00000468039 RPRD2Q5VT52 1461 aaKnown RBP7.37□□□□□ -1.23
U2AF1-207ENST00000468039 ZBTB7CA1YPR0 619 aa7.37□□□□□ -1.23
U2AF1-207ENST00000468039 PATL2C9JE40 543 aaKnown RBP7.37□□□□□ -1.23
U2AF1-207ENST00000468039 CHRNA4P43681 627 aa7.37□□□□□ -1.23
U2AF1-207ENST00000468039 SFSWAPQ12872 951 aaKnown RBP7.37□□□□□ -1.23
U2AF1-207ENST00000468039 SF3B2Q13435 895 aaKnown RBP7.37□□□□□ -1.23
U2AF1-207ENST00000468039 FZD5Q13467 585 aa7.37□□□□□ -1.23
U2AF1-207ENST00000468039 IDI1Q13907 227 aa7.37□□□□□ -1.23
U2AF1-207ENST00000468039 KRTAP17-1Q9BYP8 105 aa7.37□□□□□ -1.23
U2AF1-207ENST00000468039 STRCQ7RTU9 1775 aa7.37□□□□□ -1.23
U2AF1-207ENST00000468039 PIK3C2BO00750 1634 aa7.37□□□□□ -1.23
U2AF1-207ENST00000468039 TNFRSF10BO14763 440 aa7.36□□□□□ -1.23
U2AF1-207ENST00000468039 KCNQ4P56696 695 aa7.36□□□□□ -1.23
U2AF1-207ENST00000468039 AAMPQ13685 434 aa7.36□□□□□ -1.23
U2AF1-207ENST00000468039 MCTP1Q6DN14 999 aa7.36□□□□□ -1.23
U2AF1-207ENST00000468039 ALKBH2Q6NS38 261 aa7.36□□□□□ -1.23
U2AF1-207ENST00000468039 PNMA5Q96PV4 448 aa7.36□□□□□ -1.23
U2AF1-207ENST00000468039 RRAGCQ9HB90 399 aa7.36□□□□□ -1.23
U2AF1-207ENST00000468039 STRN4Q9NRL3 753 aa7.36□□□□□ -1.23
U2AF1-207ENST00000468039 DMGDHQ9UI17 866 aaKnown RBP7.36□□□□□ -1.23
U2AF1-207ENST00000468039 PLA2R1Q13018 1463 aa7.36□□□□□ -1.23
U2AF1-207ENST00000468039 UBR1Q8IWV7 1749 aa7.35□□□□□ -1.23
U2AF1-207ENST00000468039 FAM13AO94988 1023 aa7.35□□□□□ -1.23
U2AF1-207ENST00000468039 INPP5BP32019 993 aa7.35□□□□□ -1.23
U2AF1-207ENST00000468039 FKBP4Q02790 459 aaKnown RBP eCLIP7.35□□□□□ -1.23
U2AF1-207ENST00000468039 SPEM2Q0P670 501 aa7.35□□□□□ -1.23
U2AF1-207ENST00000468039 NOM1Q5C9Z4 860 aaKnown RBP7.35□□□□□ -1.23
U2AF1-207ENST00000468039 ETFBKMTQ8IXQ9 262 aa7.35□□□□□ -1.23
U2AF1-207ENST00000468039 TTC16Q8NEE8 873 aa7.35□□□□□ -1.23
U2AF1-207ENST00000468039 PIK3R5Q8WYR1 880 aa7.35□□□□□ -1.23
U2AF1-207ENST00000468039 EGFL7Q9UHF1 273 aa7.35□□□□□ -1.23
U2AF1-207ENST00000468039 GDF2Q9UK05 429 aaPredicted RBP7.35□□□□□ -1.23
U2AF1-207ENST00000468039 ADGRB3O60242 1522 aa7.35□□□□□ -1.23
U2AF1-207ENST00000468039 NEURL4Q96JN8 1562 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 PCSK2P16519 638 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 ZAP70P43403 619 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 KCNA1Q09470 495 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 ZNF211Q13398 564 aaPredicted RBP7.34□□□□□ -1.23
U2AF1-207ENST00000468039 LRP8Q14114 963 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 GLYCTKQ8IVS8 523 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 RGL4Q8IZJ4 473 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 CMTR1Q8N1G2 835 aaKnown RBP7.34□□□□□ -1.23
U2AF1-207ENST00000468039 THEMISQ8N1K5 641 aaPredicted RBP7.34□□□□□ -1.23
U2AF1-207ENST00000468039 GOLGA6L1Q8N7Z2 621 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 OXCT2Q9BYC2 517 aaPredicted RBP7.34□□□□□ -1.23
U2AF1-207ENST00000468039 EFCC1Q9HA90 598 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 AVENQ9NQS1 362 aaPredicted RBP7.34□□□□□ -1.23
U2AF1-207ENST00000468039 SLC52A1Q9NWF4 448 aa7.34□□□□□ -1.23
U2AF1-207ENST00000468039 RTCBQ9Y3I0 505 aaKnown RBP7.34□□□□□ -1.23
U2AF1-207ENST00000468039 SPHKAPQ2M3C7 1700 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 ARAFP10398 606 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 MPSTP25325 297 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 ADH6P28332 368 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 SERPINB4P48594 390 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 MTMR3Q13615 1198 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 CCINQ13939 588 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 RSPO4Q2I0M5 234 aaPredicted RBP7.33□□□□□ -1.24
U2AF1-207ENST00000468039 ZNF468Q5VIY5 522 aaPredicted RBP7.33□□□□□ -1.24
U2AF1-207ENST00000468039 TXNDC2Q86VQ3 553 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 MPHOSPH9Q99550 1183 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 C11orf16Q9NQ32 467 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 ANO2Q9NQ90 1003 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 PTPRTO14522 1441 aa7.33□□□□□ -1.24
U2AF1-207ENST00000468039 TRPM2O94759 1503 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 ARHGAP23Q9P227 1491 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 CLTCL1P53675 1640 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 H3BRB1 525 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 C2CD2LO14523 706 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 OPLAHO14841 1288 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 RPLP1P05386 114 aaKnown RBP7.32□□□□□ -1.24
U2AF1-207ENST00000468039 LTKP29376 864 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 GATA4P43694 442 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 ANKLE2Q86XL3 938 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 GPR152Q8TDT2 470 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 BHMTQ93088 406 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 TUT1Q9H6E5 874 aaKnown RBP7.32□□□□□ -1.24
U2AF1-207ENST00000468039 FNDC3AQ9Y2H6 1198 aaKnown RBP7.32□□□□□ -1.24
U2AF1-207ENST00000468039 POLR1AO95602 1720 aaPredicted RBP7.32□□□□□ -1.24
U2AF1-207ENST00000468039 TMEM2Q9UHN6 1383 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 SLIT1O75093 1534 aa7.32□□□□□ -1.24
U2AF1-207ENST00000468039 SCAF11Q99590 1463 aaKnown RBP7.31□□□□□ -1.24
U2AF1-207ENST00000468039 TMEM131LA2VDJ0 1609 aa7.31□□□□□ -1.24
U2AF1-207ENST00000468039 GNB5O14775 395 aa7.31□□□□□ -1.24
U2AF1-207ENST00000468039 ICMTO60725 284 aa7.31□□□□□ -1.24
U2AF1-207ENST00000468039 NPHP4O75161 1426 aaPredicted RBP7.31□□□□□ -1.24
U2AF1-207ENST00000468039 EIF1AXP47813 144 aaKnown RBP7.31□□□□□ -1.24
U2AF1-207ENST00000468039 SYT9Q86SS6 491 aa7.31□□□□□ -1.24
U2AF1-207ENST00000468039 AEBP1Q8IUX7 1158 aa7.31□□□□□ -1.24
U2AF1-207ENST00000468039 SLC30A3Q99726 388 aa7.31□□□□□ -1.24
U2AF1-207ENST00000468039 SUV39H2Q9H5I1 410 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms