RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 C7orf61Q8IZ16 206 aa15.5■□□□□ 0.07
VPS26A-204ENST00000467852 MAFAQ8NHW3 353 aaPredicted RBP15.5■□□□□ 0.07
VPS26A-204ENST00000467852 OPTNQ96CV9 577 aa15.5■□□□□ 0.07
VPS26A-204ENST00000467852 FAM161BQ96MY7 647 aa15.5■□□□□ 0.07
VPS26A-204ENST00000467852 CCL15-CCL14A0A0B4J2E2 113 aa15.49■□□□□ 0.07
VPS26A-204ENST00000467852 MAGEA10P43363 369 aaPredicted RBP15.49■□□□□ 0.07
VPS26A-204ENST00000467852 GTF2A2P52657 109 aa15.49■□□□□ 0.07
VPS26A-204ENST00000467852 SF3B3Q15393 1217 aaKnown RBP15.49■□□□□ 0.07
VPS26A-204ENST00000467852 CCL15Q16663 113 aa15.49■□□□□ 0.07
VPS26A-204ENST00000467852 HELBQ8NG08 1087 aaPredicted RBP15.49■□□□□ 0.07
VPS26A-204ENST00000467852 BRI3BPQ8WY22 251 aa15.49■□□□□ 0.07
VPS26A-204ENST00000467852 PHACTR3Q96KR7 559 aa15.49■□□□□ 0.07
VPS26A-204ENST00000467852 MIS18AQ9NYP9 233 aa15.49■□□□□ 0.07
VPS26A-204ENST00000467852 PPP2R3BQ9Y5P8 575 aa15.49■□□□□ 0.07
VPS26A-204ENST00000467852 MAP3K12Q12852 859 aa15.48■□□□□ 0.07
VPS26A-204ENST00000467852 FAM43AQ8N2R8 423 aa15.48■□□□□ 0.07
VPS26A-204ENST00000467852 FBXW7Q969H0 707 aa15.48■□□□□ 0.07
VPS26A-204ENST00000467852 ELP3Q9H9T3 547 aa15.48■□□□□ 0.07
VPS26A-204ENST00000467852 USP2O75604 605 aaPredicted RBP15.47■□□□□ 0.07
VPS26A-204ENST00000467852 PSMC4P43686 418 aa15.47■□□□□ 0.07
VPS26A-204ENST00000467852 ZNF697Q5TEC3 545 aa15.47■□□□□ 0.07
VPS26A-204ENST00000467852 NECAB2Q7Z6G3 386 aa15.47■□□□□ 0.07
VPS26A-204ENST00000467852 PAWRQ96IZ0 340 aaKnown RBP15.47■□□□□ 0.07
VPS26A-204ENST00000467852 UNC93B1Q9H1C4 597 aa15.47■□□□□ 0.07
VPS26A-204ENST00000467852 FMNL1O95466 1100 aaPredicted RBP15.46■□□□□ 0.07
VPS26A-204ENST00000467852 SYN1P17600 705 aa15.46■□□□□ 0.07
VPS26A-204ENST00000467852 DCTN1Q14203 1278 aa15.46■□□□□ 0.07
VPS26A-204ENST00000467852 DACT2Q5SW24 774 aa15.46■□□□□ 0.07
VPS26A-204ENST00000467852 MXD3Q9BW11 206 aa15.46■□□□□ 0.07
VPS26A-204ENST00000467852 MYPNQ86TC9 1320 aa15.45■□□□□ 0.06
VPS26A-204ENST00000467852 OSBPP22059 807 aa15.45■□□□□ 0.06
VPS26A-204ENST00000467852 PRKAR2BP31323 418 aa15.45■□□□□ 0.06
VPS26A-204ENST00000467852 TJAP1Q5JTD0 557 aa15.45■□□□□ 0.06
VPS26A-204ENST00000467852 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
VPS26A-204ENST00000467852 THUMPD2Q9BTF0 503 aaKnown RBP15.45■□□□□ 0.06
VPS26A-204ENST00000467852 SSC5DA1L4H1 1573 aa15.45■□□□□ 0.06
VPS26A-204ENST00000467852 HTATSF1O43719 755 aaKnown RBP15.44■□□□□ 0.06
VPS26A-204ENST00000467852 STRIP1Q5VSL9 837 aa15.44■□□□□ 0.06
VPS26A-204ENST00000467852 SLAIN1Q8ND83 568 aa15.44■□□□□ 0.06
VPS26A-204ENST00000467852 CDX2Q99626 313 aaPredicted RBP15.44■□□□□ 0.06
VPS26A-204ENST00000467852 ZCCHC17Q9NP64 241 aaKnown RBP15.44■□□□□ 0.06
VPS26A-204ENST00000467852 FAM205AQ6ZU69 1335 aa15.43■□□□□ 0.06
VPS26A-204ENST00000467852 LAMA2P24043 3122 aaKnown RBP15.43■□□□□ 0.06
VPS26A-204ENST00000467852 EIF4A1P60842 406 aaKnown RBP15.43■□□□□ 0.06
VPS26A-204ENST00000467852 NBPF12Q5TAG4 269 aaPredicted RBP15.43■□□□□ 0.06
VPS26A-204ENST00000467852 ZBED3Q96IU2 234 aaPredicted RBP15.43■□□□□ 0.06
VPS26A-204ENST00000467852 DEFB118Q96PH6 123 aa15.43■□□□□ 0.06
VPS26A-204ENST00000467852 ATP2B4P23634 1241 aa15.42■□□□□ 0.06
VPS26A-204ENST00000467852 DLGAP5Q15398 846 aa15.42■□□□□ 0.06
VPS26A-204ENST00000467852 KIAA0825Q8IV33 1275 aa15.42■□□□□ 0.06
VPS26A-204ENST00000467852 SNX27Q96L92 541 aa15.42■□□□□ 0.06
VPS26A-204ENST00000467852 XDHP47989 1333 aa15.42■□□□□ 0.06
VPS26A-204ENST00000467852 SYNGAP1Q96PV0 1343 aa15.42■□□□□ 0.06
VPS26A-204ENST00000467852 MYO1BO43795 1136 aa15.41■□□□□ 0.06
VPS26A-204ENST00000467852 CTGFP29279 349 aa15.41■□□□□ 0.06
VPS26A-204ENST00000467852 ZNF428Q96B54 188 aa15.41■□□□□ 0.06
VPS26A-204ENST00000467852 OTOFQ9HC10 1997 aa15.41■□□□□ 0.06
VPS26A-204ENST00000467852 COL4A1P02462 1669 aa15.41■□□□□ 0.06
VPS26A-204ENST00000467852 ZNF804BA4D1E1 1349 aa15.41■□□□□ 0.06
VPS26A-204ENST00000467852 ECM29Q5VYK3 1845 aa15.4■□□□□ 0.06
VPS26A-204ENST00000467852 CETPP11597 493 aa15.4■□□□□ 0.06
VPS26A-204ENST00000467852 C17orf99Q6UX52 265 aa15.4■□□□□ 0.06
VPS26A-204ENST00000467852 FAM89AQ96GI7 184 aa15.4■□□□□ 0.06
VPS26A-204ENST00000467852 RSPH6AQ9H0K4 717 aa15.4■□□□□ 0.06
VPS26A-204ENST00000467852 NCOR1O75376 2440 aa15.4■□□□□ 0.06
VPS26A-204ENST00000467852 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
VPS26A-204ENST00000467852 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
VPS26A-204ENST00000467852 AIMP1Q12904 312 aaKnown RBP15.39■□□□□ 0.05
VPS26A-204ENST00000467852 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
VPS26A-204ENST00000467852 AMER1Q5JTC6 1135 aaPredicted RBP15.39■□□□□ 0.05
VPS26A-204ENST00000467852 TTLL5Q6EMB2 1281 aa15.39■□□□□ 0.05
VPS26A-204ENST00000467852 LRP10Q7Z4F1 713 aa15.39■□□□□ 0.05
VPS26A-204ENST00000467852 CPA4Q9UI42 421 aa15.39■□□□□ 0.05
VPS26A-204ENST00000467852 ARIH1Q9Y4X5 557 aaPredicted RBP15.39■□□□□ 0.05
VPS26A-204ENST00000467852 BTBD19C9JJ37 291 aa15.38■□□□□ 0.05
VPS26A-204ENST00000467852 ADCY3O60266 1144 aa15.38■□□□□ 0.05
VPS26A-204ENST00000467852 PRKCZQ05513 592 aa15.38■□□□□ 0.05
VPS26A-204ENST00000467852 COPS6Q7L5N1 327 aa15.38■□□□□ 0.05
VPS26A-204ENST00000467852 ANKLE1Q8NAG6 615 aa15.38■□□□□ 0.05
VPS26A-204ENST00000467852 DIS3LQ8TF46 1054 aaKnown RBP15.38■□□□□ 0.05
VPS26A-204ENST00000467852 CRISPLD2Q9H0B8 497 aa15.38■□□□□ 0.05
VPS26A-204ENST00000467852 VEZTQ9HBM0 779 aa15.38■□□□□ 0.05
VPS26A-204ENST00000467852 SEC31BQ9NQW1 1179 aa15.38■□□□□ 0.05
VPS26A-204ENST00000467852 CSADQ9Y600 493 aa15.38■□□□□ 0.05
VPS26A-204ENST00000467852 EIF2S2P20042 333 aaKnown RBP15.37■□□□□ 0.05
VPS26A-204ENST00000467852 PDIA6Q15084 440 aa15.37■□□□□ 0.05
VPS26A-204ENST00000467852 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-204ENST00000467852 SEMA6BQ9H3T3 888 aa15.37■□□□□ 0.05
VPS26A-204ENST00000467852 ADGRA2Q96PE1 1338 aa15.37■□□□□ 0.05
VPS26A-204ENST00000467852 PIEZO1Q92508 2521 aa15.37■□□□□ 0.05
VPS26A-204ENST00000467852 MGAMO43451 1857 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 COL3A1P02461 1466 aaPredicted RBP15.36■□□□□ 0.05
VPS26A-204ENST00000467852 IRS4O14654 1257 aaPredicted RBP15.36■□□□□ 0.05
VPS26A-204ENST00000467852 ANXA1P04083 346 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 INHAP05111 366 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 FOSL2P15408 326 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 FCGRTP55899 365 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 MAP3K9P80192 1104 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 MTMR14Q8NCE2 650 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 MYLIPQ8WY64 445 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms