RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 GGA3Q9NZ52 723 aa13.05□□□□□ -0.32
SSR3-205ENST00000467789 PCDHB13Q9Y5F0 798 aa13.05□□□□□ -0.32
SSR3-205ENST00000467789 NBPF7P0C2Y1 421 aaPredicted RBP13.04□□□□□ -0.32
SSR3-205ENST00000467789 CTCFP49711 727 aaPredicted RBP13.04□□□□□ -0.32
SSR3-205ENST00000467789 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
SSR3-205ENST00000467789 RABL6Q3YEC7 729 aaPredicted RBP13.04□□□□□ -0.32
SSR3-205ENST00000467789 COL13A1Q5TAT6 717 aaPredicted RBP13.04□□□□□ -0.32
SSR3-205ENST00000467789 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
SSR3-205ENST00000467789 C2orf69Q8N8R5 385 aa13.04□□□□□ -0.32
SSR3-205ENST00000467789 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
SSR3-205ENST00000467789 ZNF408Q9H9D4 720 aa13.04□□□□□ -0.32
SSR3-205ENST00000467789 CD209Q9NNX6 404 aa13.04□□□□□ -0.32
SSR3-205ENST00000467789 PRDM10Q9NQV6 1147 aa13.04□□□□□ -0.32
SSR3-205ENST00000467789 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
SSR3-205ENST00000467789 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
SSR3-205ENST00000467789 MAP3K13O43283 966 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 IL1R1P14778 569 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
SSR3-205ENST00000467789 UBE4AQ14139 1066 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 SCARF1Q14162 830 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 KAZALD1Q96I82 304 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 SUCLG2Q96I99 432 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 BEGAINQ9BUH8 593 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 HDAC9Q9UKV0 1011 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
SSR3-205ENST00000467789 FOXN1O15353 648 aa13.02□□□□□ -0.33
SSR3-205ENST00000467789 TAF5LO75529 589 aa13.02□□□□□ -0.33
SSR3-205ENST00000467789 KLRK1P26718 216 aa13.02□□□□□ -0.33
SSR3-205ENST00000467789 FKBP1BP68106 108 aa13.02□□□□□ -0.33
SSR3-205ENST00000467789 ANGEL2Q5VTE6 544 aaKnown RBP13.02□□□□□ -0.33
SSR3-205ENST00000467789 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.33
SSR3-205ENST00000467789 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
SSR3-205ENST00000467789 BICC1Q9H694 974 aaKnown RBP13.02□□□□□ -0.33
SSR3-205ENST00000467789 GBA2Q9HCG7 927 aaPredicted RBP13.02□□□□□ -0.33
SSR3-205ENST00000467789 MROH5Q6ZUA9 1318 aa13.02□□□□□ -0.33
SSR3-205ENST00000467789 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
SSR3-205ENST00000467789 CA12O43570 354 aa13.01□□□□□ -0.33
SSR3-205ENST00000467789 HUNKP57058 714 aa13.01□□□□□ -0.33
SSR3-205ENST00000467789 GTF2IP78347 998 aa13.01□□□□□ -0.33
SSR3-205ENST00000467789 NOGQ13253 232 aa13.01□□□□□ -0.33
SSR3-205ENST00000467789 TNS4Q8IZW8 715 aa13.01□□□□□ -0.33
SSR3-205ENST00000467789 ZNF594Q96JF6 807 aaPredicted RBP13.01□□□□□ -0.33
SSR3-205ENST00000467789 USP44Q9H0E7 712 aa13.01□□□□□ -0.33
SSR3-205ENST00000467789 KIF16BQ96L93 1317 aa13□□□□□ -0.33
SSR3-205ENST00000467789 ADM5C9JUS6 153 aa13□□□□□ -0.33
SSR3-205ENST00000467789 WNT10BO00744 389 aa13□□□□□ -0.33
SSR3-205ENST00000467789 SASH1O94885 1247 aa13□□□□□ -0.33
SSR3-205ENST00000467789 SP7Q8TDD2 431 aaPredicted RBP13□□□□□ -0.33
SSR3-205ENST00000467789 CCDC102AQ96A19 550 aa13□□□□□ -0.33
SSR3-205ENST00000467789 CDCA5Q96FF9 252 aa13□□□□□ -0.33
SSR3-205ENST00000467789 API5Q9BZZ5 524 aaKnown RBP13□□□□□ -0.33
SSR3-205ENST00000467789 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
SSR3-205ENST00000467789 PLIN1O60240 522 aa12.99□□□□□ -0.33
SSR3-205ENST00000467789 GRM1Q13255 1194 aa12.99□□□□□ -0.33
SSR3-205ENST00000467789 NBPF9Q3BBW0 867 aa12.99□□□□□ -0.33
SSR3-205ENST00000467789 RGMBQ6NW40 437 aa12.99□□□□□ -0.33
SSR3-205ENST00000467789 ANKRD44Q8N8A2 993 aa12.99□□□□□ -0.33
SSR3-205ENST00000467789 MTMR14Q8NCE2 650 aa12.99□□□□□ -0.33
SSR3-205ENST00000467789 ARHGAP45Q92619 1136 aa12.99□□□□□ -0.33
SSR3-205ENST00000467789 COL1A1P02452 1464 aaPredicted RBP12.98□□□□□ -0.33
SSR3-205ENST00000467789 ASTN2O75129 1339 aaPredicted RBP12.98□□□□□ -0.33
SSR3-205ENST00000467789 FAM205AQ6ZU69 1335 aa12.98□□□□□ -0.33
SSR3-205ENST00000467789 ECM29Q5VYK3 1845 aa12.98□□□□□ -0.33
SSR3-205ENST00000467789 SNAP23O00161 211 aa12.98□□□□□ -0.33
SSR3-205ENST00000467789 HIBADHP31937 336 aaKnown RBP12.98□□□□□ -0.33
SSR3-205ENST00000467789 NF2P35240 595 aa12.98□□□□□ -0.33
SSR3-205ENST00000467789 APOBEC3FQ8IUX4 373 aaKnown RBP12.98□□□□□ -0.33
SSR3-205ENST00000467789 KIAA0825Q8IV33 1275 aa12.98□□□□□ -0.33
SSR3-205ENST00000467789 ZBED3Q96IU2 234 aaPredicted RBP12.98□□□□□ -0.33
SSR3-205ENST00000467789 MXD3Q9BW11 206 aa12.98□□□□□ -0.33
SSR3-205ENST00000467789 PAPPA2Q9BXP8 1791 aa12.98□□□□□ -0.33
SSR3-205ENST00000467789 PDE8BO95263 885 aa12.97□□□□□ -0.33
SSR3-205ENST00000467789 UBTFL1P0CB47 393 aaPredicted RBP12.97□□□□□ -0.33
SSR3-205ENST00000467789 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
SSR3-205ENST00000467789 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
SSR3-205ENST00000467789 TDRD7Q8NHU6 1098 aaKnown RBP12.97□□□□□ -0.33
SSR3-205ENST00000467789 PUS3Q9BZE2 481 aaKnown RBP12.97□□□□□ -0.33
SSR3-205ENST00000467789 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
SSR3-205ENST00000467789 IPO8O15397 1037 aaKnown RBP12.96□□□□□ -0.33
SSR3-205ENST00000467789 MYO1BO43795 1136 aa12.96□□□□□ -0.33
SSR3-205ENST00000467789 AOC2O75106 756 aa12.96□□□□□ -0.33
SSR3-205ENST00000467789 HSPA8P11142 646 aaKnown RBP12.96□□□□□ -0.33
SSR3-205ENST00000467789 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.33
SSR3-205ENST00000467789 LBX1P52954 281 aa12.96□□□□□ -0.33
SSR3-205ENST00000467789 CAVIN4Q5BKX8 364 aa12.96□□□□□ -0.33
SSR3-205ENST00000467789 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
SSR3-205ENST00000467789 DIEXFQ68CQ4 756 aaKnown RBP12.96□□□□□ -0.33
SSR3-205ENST00000467789 DLK2Q6UY11 383 aa12.96□□□□□ -0.33
SSR3-205ENST00000467789 CERS5Q8N5B7 392 aa12.96□□□□□ -0.33
SSR3-205ENST00000467789 FAM84BQ96KN1 310 aaPredicted RBP12.96□□□□□ -0.33
SSR3-205ENST00000467789 PPP2R3BQ9Y5P8 575 aa12.96□□□□□ -0.33
SSR3-205ENST00000467789 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.34
SSR3-205ENST00000467789 FAM155AB1AL88 458 aaPredicted RBP12.95□□□□□ -0.34
SSR3-205ENST00000467789 VPS37DQ86XT2 251 aa12.95□□□□□ -0.34
SSR3-205ENST00000467789 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
SSR3-205ENST00000467789 VGLL2Q8N8G2 317 aa12.95□□□□□ -0.34
SSR3-205ENST00000467789 EYA2O00167 538 aa12.94□□□□□ -0.34
SSR3-205ENST00000467789 SLC10A3P09131 477 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms