RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 CDC27P30260 824 aa8.05□□□□□ -1.12
GAPVD1-211ENST00000467707 TPTE2Q6XPS3 522 aa8.05□□□□□ -1.12
GAPVD1-211ENST00000467707 RELL1Q8IUW5 271 aa8.05□□□□□ -1.12
GAPVD1-211ENST00000467707 EDARADDQ8WWZ3 215 aa8.05□□□□□ -1.12
GAPVD1-211ENST00000467707 SEC31BQ9NQW1 1179 aa8.05□□□□□ -1.12
GAPVD1-211ENST00000467707 PRDM6Q9NQX0 595 aa8.05□□□□□ -1.12
GAPVD1-211ENST00000467707 TMEM39AQ9NV64 488 aa8.05□□□□□ -1.12
GAPVD1-211ENST00000467707 OIP5O43482 229 aa8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 RPS26P62854 115 aaKnown RBP8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 KRT76Q01546 638 aa8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 PCDH1Q08174 1060 aa8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 SF3A1Q15459 793 aaKnown RBP8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 NAALADL2Q58DX5 795 aa8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 C20orf204Q6ZNR8 217 aa8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 VN1R5Q7Z5H4 357 aa8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 WNT8BQ93098 351 aa8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 JPH1Q9HDC5 661 aaPredicted RBP8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 TRIM33Q9UPN9 1127 aa8.04□□□□□ -1.12
GAPVD1-211ENST00000467707 BCRP11274 1271 aa8.03□□□□□ -1.12
GAPVD1-211ENST00000467707 IKBKEQ14164 716 aa8.03□□□□□ -1.12
GAPVD1-211ENST00000467707 SLC43A3Q8NBI5 491 aa8.03□□□□□ -1.12
GAPVD1-211ENST00000467707 GALNT6Q8NCL4 622 aa8.03□□□□□ -1.12
GAPVD1-211ENST00000467707 SOX17Q9H6I2 414 aaPredicted RBP8.03□□□□□ -1.12
GAPVD1-211ENST00000467707 SRA1Q9HD15 236 aaKnown RBP8.03□□□□□ -1.12
GAPVD1-211ENST00000467707 GPN3Q9UHW5 284 aaPredicted RBP8.03□□□□□ -1.12
GAPVD1-211ENST00000467707 H3BRJ5 948 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 ENC1O14682 589 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 MAP3K10Q02779 954 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 ZNF394Q53GI3 561 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 SCARA3Q6AZY7 606 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 GDF6Q6KF10 455 aaPredicted RBP8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 FAM117BQ6P1L5 589 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 CHSY3Q70JA7 882 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 SPATA32Q96LK8 384 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 TMEM74Q96NL1 305 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 LACRTQ9GZZ8 138 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 KBTBD4Q9NVX7 518 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 STARD13Q9Y3M8 1113 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 PPME1Q9Y570 386 aa8.02□□□□□ -1.13
GAPVD1-211ENST00000467707 FBXO24O75426 580 aa8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 ESRRAP11474 423 aaPredicted RBP8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 RACK1P63244 317 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 PIP4K2BP78356 416 aa8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 FAAP100Q0VG06 881 aa8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 DIEXFQ68CQ4 756 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 MAP4K3Q8IVH8 894 aa8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 DCAF11Q8TEB1 546 aa8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 NUDT8Q8WV74 236 aa8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 SREK1Q8WXA9 508 aaKnown RBP8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 INPP5FQ9Y2H2 1132 aa8.01□□□□□ -1.13
GAPVD1-211ENST00000467707 M0R082 166 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 WFS1O76024 890 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 ALBP02768 609 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 NME2P22392 152 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 GBP2P32456 591 aaPredicted RBP8□□□□□ -1.13
GAPVD1-211ENST00000467707 ARL4DP49703 201 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 LIG3P49916 1009 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 AFF1P51825 1210 aaKnown RBP8□□□□□ -1.13
GAPVD1-211ENST00000467707 HNRNPUQ00839 825 aaKnown RBP eCLIP8□□□□□ -1.13
GAPVD1-211ENST00000467707 GRIK5Q16478 980 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 TTBK2Q6IQ55 1244 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 WFDC8Q8IUA0 241 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 IL22RA1Q8N6P7 574 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 ZNF417Q8TAU3 575 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 BTBD6Q96KE9 485 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 ZNF587Q96SQ5 575 aaPredicted RBP8□□□□□ -1.13
GAPVD1-211ENST00000467707 TINF2Q9BSI4 451 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 EMILIN2Q9BXX0 1053 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 ACBD3Q9H3P7 528 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 CYP8B1Q9UNU6 501 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 PCDHGB7Q9Y5F8 929 aa8□□□□□ -1.13
GAPVD1-211ENST00000467707 CELA3AP09093 270 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 LMNB1P20700 586 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 EPHA1P21709 976 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 GJA8P48165 433 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 AP3B2Q13367 1082 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 LRRC14Q15048 493 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 ZNF423Q2M1K9 1284 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 AGMOQ6ZNB7 445 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 C1orf229Q6ZS94 237 aaPredicted RBP7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 CCDC84Q86UT8 332 aaPredicted RBP7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 VPS37DQ86XT2 251 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 RHOVQ96L33 236 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 CAPN10Q9HC96 672 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 OSGEPQ9NPF4 335 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 KCNQ5Q9NR82 932 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 SH2B1Q9NRF2 756 aaPredicted RBP7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 ENAMQ9NRM1 1142 aa7.99□□□□□ -1.13
GAPVD1-211ENST00000467707 AMPD1P23109 780 aa7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 EIF4A3P38919 411 aaKnown RBP7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 LMNB2Q03252 620 aa7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 PCNX4Q63HM2 1172 aa7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 MSL1Q68DK7 614 aa7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 KIAA0825Q8IV33 1275 aa7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 PHC3Q8NDX5 983 aa7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 DRC1Q96MC2 740 aa7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 SPON2Q9BUD6 331 aa7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 COPRSQ9NQ92 184 aa7.98□□□□□ -1.13
GAPVD1-211ENST00000467707 CELA2BP08218 269 aaPredicted RBP7.97□□□□□ -1.13
GAPVD1-211ENST00000467707 GMPRP36959 345 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms