RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 IL1R1P14778 569 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 GTF2IP78347 998 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 LDHAL6AQ6ZMR3 332 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 ZNF804AQ7Z570 1209 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 RASAL3Q86YV0 1011 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 ARHGAP45Q92619 1136 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 CSRNP1Q96S65 589 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 RNF186Q9NXI6 227 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 IRS2Q9Y4H2 1338 aa17.64■□□□□ 0.41
CCHCR1-211ENST00000467553 ZBED3Q96IU2 234 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-211ENST00000467553 A0A1B0GUL6 1792 aa17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 PLIN1O60240 522 aa17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 RGS19P49795 217 aa17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 ARMC9Q7Z3E5 817 aa17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 KIAA0825Q8IV33 1275 aa17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 MXD3Q9BW11 206 aa17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 MCOLN1Q9GZU1 580 aa17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 CNNM1Q9NRU3 951 aa17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 PPP2R3BQ9Y5P8 575 aa17.62■□□□□ 0.41
CCHCR1-211ENST00000467553 UNCXA6NJT0 531 aa17.61■□□□□ 0.41
CCHCR1-211ENST00000467553 CCDC85CA6NKD9 419 aa17.61■□□□□ 0.41
CCHCR1-211ENST00000467553 MYO1BO43795 1136 aa17.61■□□□□ 0.41
CCHCR1-211ENST00000467553 TAF5LO75529 589 aa17.61■□□□□ 0.41
CCHCR1-211ENST00000467553 KLRK1P26718 216 aa17.61■□□□□ 0.41
CCHCR1-211ENST00000467553 DLGAP5Q15398 846 aa17.61■□□□□ 0.41
CCHCR1-211ENST00000467553 CLUAP1Q96AJ1 413 aa17.61■□□□□ 0.41
CCHCR1-211ENST00000467553 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
CCHCR1-211ENST00000467553 TRPA1O75762 1119 aa17.6■□□□□ 0.41
CCHCR1-211ENST00000467553 SASH1O94885 1247 aa17.6■□□□□ 0.41
CCHCR1-211ENST00000467553 UBTFL1P0CB47 393 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-211ENST00000467553 DGKZQ13574 1117 aa17.6■□□□□ 0.41
CCHCR1-211ENST00000467553 UBE4AQ14139 1066 aa17.6■□□□□ 0.41
CCHCR1-211ENST00000467553 ATF7IPQ6VMQ6 1270 aa17.6■□□□□ 0.41
CCHCR1-211ENST00000467553 ANKRD44Q8N8A2 993 aa17.6■□□□□ 0.41
CCHCR1-211ENST00000467553 ECM29Q5VYK3 1845 aa17.6■□□□□ 0.41
CCHCR1-211ENST00000467553 TRIM27P14373 513 aa17.59■□□□□ 0.41
CCHCR1-211ENST00000467553 TM4SF4P48230 202 aa17.59■□□□□ 0.41
CCHCR1-211ENST00000467553 TTLL12Q14166 644 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-211ENST00000467553 RABL6Q3YEC7 729 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-211ENST00000467553 ZKSCAN2Q63HK3 967 aa17.59■□□□□ 0.41
CCHCR1-211ENST00000467553 UBE2Q2LH0YL09 131 aa17.58■□□□□ 0.4
CCHCR1-211ENST00000467553 SNAP23O00161 211 aa17.58■□□□□ 0.4
CCHCR1-211ENST00000467553 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-211ENST00000467553 INTS3Q68E01 1043 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-211ENST00000467553 PUS3Q9BZE2 481 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-211ENST00000467553 FAM205AQ6ZU69 1335 aa17.57■□□□□ 0.4
CCHCR1-211ENST00000467553 MROH5Q6ZUA9 1318 aa17.57■□□□□ 0.4
CCHCR1-211ENST00000467553 SREBF2Q12772 1141 aa17.57■□□□□ 0.4
CCHCR1-211ENST00000467553 SUPT20HL1Q3ZLR7 823 aa17.57■□□□□ 0.4
CCHCR1-211ENST00000467553 MEIS3Q99687 375 aa17.57■□□□□ 0.4
CCHCR1-211ENST00000467553 DEFB129Q9H1M3 183 aa17.57■□□□□ 0.4
CCHCR1-211ENST00000467553 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
CCHCR1-211ENST00000467553 INHBEP58166 350 aa17.56■□□□□ 0.4
CCHCR1-211ENST00000467553 PKN2Q16513 984 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-211ENST00000467553 MAP3K11Q16584 847 aa17.56■□□□□ 0.4
CCHCR1-211ENST00000467553 LDLRAD1Q5T700 205 aa17.56■□□□□ 0.4
CCHCR1-211ENST00000467553 PRAMEF18Q5VWM3 479 aa17.56■□□□□ 0.4
CCHCR1-211ENST00000467553 CERS5Q8N5B7 392 aa17.56■□□□□ 0.4
CCHCR1-211ENST00000467553 LRRFIP2Q9Y608 721 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-211ENST00000467553 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 PPP1R12BO60237 982 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 HIBADHP31937 336 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 MLLT1Q03111 559 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 CFAP100Q494V2 611 aa17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 MOB2Q70IA6 237 aa17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 CTU1Q7Z7A3 348 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 TDRD7Q8NHU6 1098 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 KLHDC4Q8TBB5 520 aa17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 CFHR5Q9BXR6 569 aa17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 SCAF8Q9UPN6 1271 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-211ENST00000467553 ALDH1A1P00352 501 aa17.54■□□□□ 0.4
CCHCR1-211ENST00000467553 GNAI3P08754 354 aa17.54■□□□□ 0.4
CCHCR1-211ENST00000467553 LRRC24Q50LG9 513 aa17.54■□□□□ 0.4
CCHCR1-211ENST00000467553 SERPINA10Q9UK55 444 aa17.54■□□□□ 0.4
CCHCR1-211ENST00000467553 RIPOR2Q9Y4F9 1068 aa17.54■□□□□ 0.4
CCHCR1-211ENST00000467553 PTPN12Q05209 780 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-211ENST00000467553 TNFAIP1Q13829 316 aa17.53■□□□□ 0.4
CCHCR1-211ENST00000467553 TMEM57Q8N5G2 664 aa17.53■□□□□ 0.4
CCHCR1-211ENST00000467553 ANGEL1Q9UNK9 670 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-211ENST00000467553 ZBTB48P10074 688 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-211ENST00000467553 METTL24Q5JXM2 366 aa17.52■□□□□ 0.4
CCHCR1-211ENST00000467553 MFSD14BQ5SR56 506 aa17.52■□□□□ 0.4
CCHCR1-211ENST00000467553 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.4
CCHCR1-211ENST00000467553 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
CCHCR1-211ENST00000467553 SLC10A4Q96EP9 437 aa17.52■□□□□ 0.4
CCHCR1-211ENST00000467553 FAM84BQ96KN1 310 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-211ENST00000467553 PRMT6Q96LA8 375 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-211ENST00000467553 MANSC4A6NHS7 340 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-211ENST00000467553 F8W031 263 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-211ENST00000467553 RFX5P48382 616 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-211ENST00000467553 CAVIN4Q5BKX8 364 aa17.51■□□□□ 0.39
CCHCR1-211ENST00000467553 SPRYD7Q5W111 196 aa17.51■□□□□ 0.39
CCHCR1-211ENST00000467553 VPS37DQ86XT2 251 aa17.51■□□□□ 0.39
CCHCR1-211ENST00000467553 DZIP1LQ8IYY4 767 aaKnown RBP17.51■□□□□ 0.39
CCHCR1-211ENST00000467553 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
CCHCR1-211ENST00000467553 IREB2P48200 963 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms