RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 SH2B1Q9NRF2 756 aaPredicted RBP10.71□□□□□ -0.69
TMEM254-209ENST00000467529 WWC3Q9ULE0 1092 aa10.71□□□□□ -0.69
TMEM254-209ENST00000467529 TPCN1Q9ULQ1 816 aa10.71□□□□□ -0.69
TMEM254-209ENST00000467529 TCRBV5S4A2TA0A5A2 114 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 GPAA1O43292 621 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 GYS1P13807 737 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 PDE6AP16499 860 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 TOB2Q14106 344 aaPredicted RBP10.7□□□□□ -0.7
TMEM254-209ENST00000467529 ANKRD1Q15327 319 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 ME3Q16798 604 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 TTLL5Q6EMB2 1281 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 ZNF532Q9HCE3 1301 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 BRD1O95696 1058 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 ST3GAL1Q11201 340 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 CCDC83Q8IWF9 413 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 CNBD1Q8NA66 436 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 CTNNA3Q9UI47 895 aa10.7□□□□□ -0.7
TMEM254-209ENST00000467529 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.7□□□□□ -0.7
TMEM254-209ENST00000467529 ZNF804BA4D1E1 1349 aa10.69□□□□□ -0.7
TMEM254-209ENST00000467529 E7EWF7 191 aa10.69□□□□□ -0.7
TMEM254-209ENST00000467529 TRAK2O60296 914 aa10.69□□□□□ -0.7
TMEM254-209ENST00000467529 FGAP02671 866 aa10.69□□□□□ -0.7
TMEM254-209ENST00000467529 GYG1P46976 350 aa10.69□□□□□ -0.7
TMEM254-209ENST00000467529 MAP3K12Q12852 859 aa10.69□□□□□ -0.7
TMEM254-209ENST00000467529 PRR5LQ6MZQ0 368 aa10.69□□□□□ -0.7
TMEM254-209ENST00000467529 POTEDQ86YR6 584 aa10.69□□□□□ -0.7
TMEM254-209ENST00000467529 NECAB1Q8N987 351 aa10.69□□□□□ -0.7
TMEM254-209ENST00000467529 HMGB1P09429 215 aaKnown RBP10.68□□□□□ -0.7
TMEM254-209ENST00000467529 FOXD4L5Q5VV16 416 aaPredicted RBP10.68□□□□□ -0.7
TMEM254-209ENST00000467529 Q6ZUG5 572 aa10.68□□□□□ -0.7
TMEM254-209ENST00000467529 MAGEB6Q8N7X4 407 aa10.68□□□□□ -0.7
TMEM254-209ENST00000467529 FOXD4L4Q8WXT5 416 aaPredicted RBP10.68□□□□□ -0.7
TMEM254-209ENST00000467529 ANKRD2Q9GZV1 360 aa10.68□□□□□ -0.7
TMEM254-209ENST00000467529 IQSEC3Q9UPP2 1182 aaPredicted RBP10.68□□□□□ -0.7
TMEM254-209ENST00000467529 SMC3Q9UQE7 1217 aa10.68□□□□□ -0.7
TMEM254-209ENST00000467529 EP400Q96L91 3159 aa10.68□□□□□ -0.7
TMEM254-209ENST00000467529 PLSCR1O15162 318 aa10.68□□□□□ -0.7
TMEM254-209ENST00000467529 IMMTQ16891 758 aaKnown RBP10.68□□□□□ -0.7
TMEM254-209ENST00000467529 CAVIN4Q5BKX8 364 aa10.68□□□□□ -0.7
TMEM254-209ENST00000467529 DHX32Q7L7V1 743 aaKnown RBP10.68□□□□□ -0.7
TMEM254-209ENST00000467529 FAM84BQ96KN1 310 aaPredicted RBP10.68□□□□□ -0.7
TMEM254-209ENST00000467529 GNL3LQ9NVN8 582 aaKnown RBP10.68□□□□□ -0.7
TMEM254-209ENST00000467529 APBA3O96018 575 aa10.67□□□□□ -0.7
TMEM254-209ENST00000467529 SERPINB2P05120 415 aa10.67□□□□□ -0.7
TMEM254-209ENST00000467529 PTMSP20962 102 aa10.67□□□□□ -0.7
TMEM254-209ENST00000467529 HMGB2P26583 209 aaKnown RBP10.67□□□□□ -0.7
TMEM254-209ENST00000467529 KLRK1P26718 216 aa10.67□□□□□ -0.7
TMEM254-209ENST00000467529 RXRBP28702 533 aa10.67□□□□□ -0.7
TMEM254-209ENST00000467529 FBXO33Q7Z6M2 555 aa10.67□□□□□ -0.7
TMEM254-209ENST00000467529 STRBPQ96SI9 672 aaKnown RBP10.67□□□□□ -0.7
TMEM254-209ENST00000467529 LRRC2Q9BYS8 371 aa10.67□□□□□ -0.7
TMEM254-209ENST00000467529 COL1A1P02452 1464 aaPredicted RBP10.67□□□□□ -0.7
TMEM254-209ENST00000467529 GOLGA6L22H0YM25 854 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 DTNBO60941 627 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 GJB2P29033 226 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 HAND2P61296 217 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 EXOSC10Q01780 885 aaKnown RBP10.66□□□□□ -0.7
TMEM254-209ENST00000467529 GRAPQ13588 217 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 ZNF827Q17R98 1081 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 MCTP1Q6DN14 999 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 VPS37DQ86XT2 251 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 GRAPLQ8TC17 118 aaPredicted RBP10.66□□□□□ -0.7
TMEM254-209ENST00000467529 AIDAQ96BJ3 306 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 LRP2BPQ9P2M1 347 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 WDR33Q9C0J8 1336 aaKnown RBP10.66□□□□□ -0.7
TMEM254-209ENST00000467529 ST5P78524 1137 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 DDR1Q08345 913 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 CHAMP1Q96JM3 812 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 DENND2AQ9ULE3 1009 aa10.66□□□□□ -0.7
TMEM254-209ENST00000467529 POLRMTO00411 1230 aaKnown RBP10.65□□□□□ -0.7
TMEM254-209ENST00000467529 ZNF213O14771 459 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 MBD4O95243 580 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 APPP05067 770 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 SYT1P21579 422 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 FGD1P98174 961 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 STK3Q13188 491 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 SLC51AQ86UW1 340 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 BRF1Q92994 677 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 AKT1S1Q96B36 256 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 AGXT2Q9BYV1 514 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 TFCP2L1Q9NZI6 479 aa10.65□□□□□ -0.7
TMEM254-209ENST00000467529 PATL2C9JE40 543 aaKnown RBP10.65□□□□□ -0.71
TMEM254-209ENST00000467529 STX6O43752 255 aa10.65□□□□□ -0.71
TMEM254-209ENST00000467529 HIBADHP31937 336 aaKnown RBP10.65□□□□□ -0.71
TMEM254-209ENST00000467529 ALX1Q15699 326 aa10.65□□□□□ -0.71
TMEM254-209ENST00000467529 SKOR2Q2VWA4 1001 aaPredicted RBP10.65□□□□□ -0.71
TMEM254-209ENST00000467529 CRY2Q49AN0 593 aa10.65□□□□□ -0.71
TMEM254-209ENST00000467529 CHST3Q7LGC8 479 aa10.65□□□□□ -0.71
TMEM254-209ENST00000467529 RPGRQ92834 1020 aaKnown RBP10.65□□□□□ -0.71
TMEM254-209ENST00000467529 ARMT1Q9H993 441 aa10.65□□□□□ -0.71
TMEM254-209ENST00000467529 ABCF2Q9UG63 623 aa10.65□□□□□ -0.71
TMEM254-209ENST00000467529 IRS2Q9Y4H2 1338 aa10.64□□□□□ -0.71
TMEM254-209ENST00000467529 SEMA3EO15041 775 aa10.64□□□□□ -0.71
TMEM254-209ENST00000467529 ZSCAN22P10073 491 aaPredicted RBP10.64□□□□□ -0.71
TMEM254-209ENST00000467529 TXNRD3Q86VQ6 643 aa10.64□□□□□ -0.71
TMEM254-209ENST00000467529 LCORLQ8N3X6 602 aa10.64□□□□□ -0.71
TMEM254-209ENST00000467529 GTF3C6Q969F1 213 aa10.64□□□□□ -0.71
TMEM254-209ENST00000467529 NBPF3Q9H094 633 aa10.64□□□□□ -0.71
TMEM254-209ENST00000467529 LMBRD1Q9NUN5 540 aa10.64□□□□□ -0.71
TMEM254-209ENST00000467529 RAI14Q9P0K7 980 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms