RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 VN1R5Q7Z5H4 357 aa8.19□□□□□ -1.1
SMC4-207ENST00000467263 GTF3C2Q8WUA4 911 aaPredicted RBP8.19□□□□□ -1.1
SMC4-207ENST00000467263 WNT8BQ93098 351 aa8.19□□□□□ -1.1
SMC4-207ENST00000467263 NXPE3Q969Y0 559 aa8.19□□□□□ -1.1
SMC4-207ENST00000467263 ZKSCAN3Q9BRR0 538 aa8.19□□□□□ -1.1
SMC4-207ENST00000467263 OSGEPQ9NPF4 335 aa8.19□□□□□ -1.1
SMC4-207ENST00000467263 TMEM88BA6NKF7 163 aa8.18□□□□□ -1.1
SMC4-207ENST00000467263 TAL1P17542 331 aaPredicted RBP8.18□□□□□ -1.1
SMC4-207ENST00000467263 CABP4P57796 275 aa8.18□□□□□ -1.1
SMC4-207ENST00000467263 SGO2Q562F6 1265 aa8.18□□□□□ -1.1
SMC4-207ENST00000467263 RNF208Q9H0X6 261 aa8.18□□□□□ -1.1
SMC4-207ENST00000467263 LATS2Q9NRM7 1088 aa8.18□□□□□ -1.1
SMC4-207ENST00000467263 FOXD3Q9UJU5 478 aaPredicted RBP8.18□□□□□ -1.1
SMC4-207ENST00000467263 POLIQ9UNA4 740 aa8.18□□□□□ -1.1
SMC4-207ENST00000467263 SART1O43290 800 aaKnown RBP8.17□□□□□ -1.1
SMC4-207ENST00000467263 MZF1P28698 734 aaPredicted RBP8.17□□□□□ -1.1
SMC4-207ENST00000467263 IRAK1P51617 712 aa8.17□□□□□ -1.1
SMC4-207ENST00000467263 ANKRD34AQ69YU3 496 aa8.17□□□□□ -1.1
SMC4-207ENST00000467263 DTX1Q86Y01 620 aa8.17□□□□□ -1.1
SMC4-207ENST00000467263 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
SMC4-207ENST00000467263 MFSD14AQ96MC6 490 aa8.17□□□□□ -1.1
SMC4-207ENST00000467263 OSMRQ99650 979 aa8.17□□□□□ -1.1
SMC4-207ENST00000467263 FAM177BA6PVY3 158 aa8.16□□□□□ -1.1
SMC4-207ENST00000467263 WDR64B1ANS9 1081 aa8.16□□□□□ -1.1
SMC4-207ENST00000467263 C19orf57Q0VDD7 668 aa8.16□□□□□ -1.1
SMC4-207ENST00000467263 TNFRSF21O75509 655 aa8.15□□□□□ -1.1
SMC4-207ENST00000467263 FDX2Q6P4F2 183 aa8.15□□□□□ -1.1
SMC4-207ENST00000467263 METTL12A8MUP2 240 aa8.14□□□□□ -1.11
SMC4-207ENST00000467263 DRD2P14416 443 aa8.14□□□□□ -1.11
SMC4-207ENST00000467263 MAP4P27816 1152 aaKnown RBP8.14□□□□□ -1.11
SMC4-207ENST00000467263 SSFA2P28290 1259 aa8.14□□□□□ -1.11
SMC4-207ENST00000467263 PEAR1Q5VY43 1037 aaPredicted RBP8.14□□□□□ -1.11
SMC4-207ENST00000467263 INTS5Q6P9B9 1019 aaKnown RBP8.14□□□□□ -1.11
SMC4-207ENST00000467263 RETREG2Q8NC44 543 aa8.14□□□□□ -1.11
SMC4-207ENST00000467263 BSNDQ8WZ55 320 aa8.14□□□□□ -1.11
SMC4-207ENST00000467263 FMNL2Q96PY5 1086 aa8.14□□□□□ -1.11
SMC4-207ENST00000467263 USP26Q9BXU7 913 aa8.14□□□□□ -1.11
SMC4-207ENST00000467263 TMPRSS13Q9BYE2 586 aa8.14□□□□□ -1.11
SMC4-207ENST00000467263 LOC100289279A0A1B0GTE1 492 aa8.13□□□□□ -1.11
SMC4-207ENST00000467263 MEGF11A6BM72 1044 aa8.13□□□□□ -1.11
SMC4-207ENST00000467263 F13BP05160 661 aa8.13□□□□□ -1.11
SMC4-207ENST00000467263 RPLP1P05386 114 aaKnown RBP8.13□□□□□ -1.11
SMC4-207ENST00000467263 GRIK1P39086 918 aa8.13□□□□□ -1.11
SMC4-207ENST00000467263 IKBKEQ14164 716 aa8.13□□□□□ -1.11
SMC4-207ENST00000467263 PAX4O43316 350 aa8.12□□□□□ -1.11
SMC4-207ENST00000467263 GAS2O43903 313 aaKnown RBP8.12□□□□□ -1.11
SMC4-207ENST00000467263 TIAF1O95411 115 aa8.12□□□□□ -1.11
SMC4-207ENST00000467263 PCSK2P16519 638 aa8.12□□□□□ -1.11
SMC4-207ENST00000467263 PHLDB3Q6NSJ2 640 aa8.12□□□□□ -1.11
SMC4-207ENST00000467263 FBXL6Q8N531 539 aa8.12□□□□□ -1.11
SMC4-207ENST00000467263 C12orf50Q8NA57 414 aaPredicted RBP8.12□□□□□ -1.11
SMC4-207ENST00000467263 ASAP3Q8TDY4 903 aa8.12□□□□□ -1.11
SMC4-207ENST00000467263 FZD6O60353 706 aa8.11□□□□□ -1.11
SMC4-207ENST00000467263 PHACTR2O75167 634 aa8.11□□□□□ -1.11
SMC4-207ENST00000467263 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
SMC4-207ENST00000467263 ESRRAP11474 423 aaPredicted RBP8.11□□□□□ -1.11
SMC4-207ENST00000467263 CDPF1Q6NVV7 123 aa8.11□□□□□ -1.11
SMC4-207ENST00000467263 NFXL1Q6ZNB6 911 aa8.11□□□□□ -1.11
SMC4-207ENST00000467263 CCDC87Q9NVE4 849 aa8.11□□□□□ -1.11
SMC4-207ENST00000467263 HIF3AQ9Y2N7 669 aa8.11□□□□□ -1.11
SMC4-207ENST00000467263 WNT11O96014 354 aa8.1□□□□□ -1.11
SMC4-207ENST00000467263 NPR3P17342 541 aa8.1□□□□□ -1.11
SMC4-207ENST00000467263 RXRBP28702 533 aa8.1□□□□□ -1.11
SMC4-207ENST00000467263 ARL4DP49703 201 aa8.1□□□□□ -1.11
SMC4-207ENST00000467263 NUTM2GQ5VZR2 741 aa8.1□□□□□ -1.11
SMC4-207ENST00000467263 SMG8Q8ND04 991 aaKnown RBP8.1□□□□□ -1.11
SMC4-207ENST00000467263 FBLIM1Q8WUP2 373 aa8.1□□□□□ -1.11
SMC4-207ENST00000467263 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
SMC4-207ENST00000467263 BHLHE41Q9C0J9 482 aaPredicted RBP8.1□□□□□ -1.11
SMC4-207ENST00000467263 ANO2Q9NQ90 1003 aa8.1□□□□□ -1.11
SMC4-207ENST00000467263 ADGRE2Q9UHX3 823 aa8.1□□□□□ -1.11
SMC4-207ENST00000467263 CTSBP07858 339 aa8.09□□□□□ -1.11
SMC4-207ENST00000467263 ADMP35318 185 aa8.09□□□□□ -1.11
SMC4-207ENST00000467263 TTC16Q8NEE8 873 aa8.09□□□□□ -1.11
SMC4-207ENST00000467263 NRSN2Q9GZP1 204 aa8.09□□□□□ -1.11
SMC4-207ENST00000467263 SUGCTQ9HAC7 445 aa8.09□□□□□ -1.11
SMC4-207ENST00000467263 PIM2Q9P1W9 311 aa8.09□□□□□ -1.11
SMC4-207ENST00000467263 USTQ9Y2C2 406 aa8.09□□□□□ -1.11
SMC4-207ENST00000467263 EDN3P14138 238 aa8.08□□□□□ -1.12
SMC4-207ENST00000467263 AAMPQ13685 434 aa8.08□□□□□ -1.12
SMC4-207ENST00000467263 MSMPQ1L6U9 139 aa8.08□□□□□ -1.12
SMC4-207ENST00000467263 ABI1Q8IZP0 508 aa8.08□□□□□ -1.12
SMC4-207ENST00000467263 C2CD4AQ8NCU7 369 aaPredicted RBP8.08□□□□□ -1.12
SMC4-207ENST00000467263 SNX29Q8TEQ0 813 aa8.08□□□□□ -1.12
SMC4-207ENST00000467263 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
SMC4-207ENST00000467263 GSTM4Q03013 218 aa8.07□□□□□ -1.12
SMC4-207ENST00000467263 NFKBIBQ15653 356 aa8.07□□□□□ -1.12
SMC4-207ENST00000467263 RNF114Q9Y508 228 aa8.07□□□□□ -1.12
SMC4-207ENST00000467263 BTBD11A6QL63 1104 aa8.06□□□□□ -1.12
SMC4-207ENST00000467263 ZNF211Q13398 564 aaPredicted RBP8.06□□□□□ -1.12
SMC4-207ENST00000467263 ZNF423Q2M1K9 1284 aa8.06□□□□□ -1.12
SMC4-207ENST00000467263 SPRED3Q2MJR0 410 aa8.06□□□□□ -1.12
SMC4-207ENST00000467263 ALKBH2Q6NS38 261 aa8.06□□□□□ -1.12
SMC4-207ENST00000467263 SOX17Q9H6I2 414 aaPredicted RBP8.06□□□□□ -1.12
SMC4-207ENST00000467263 ZFYVE28Q9HCC9 887 aa8.06□□□□□ -1.12
SMC4-207ENST00000467263 FAM95CA0A1B0GW59 222 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 TXKP42681 527 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 GRIA4P48058 902 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 COL19A1Q14993 1142 aa8.05□□□□□ -1.12
SMC4-207ENST00000467263 EXOSC6Q5RKV6 272 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms