RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ALAS2P22557 587 aa6.3□□□□□ -1.4
VPS13A-209ENST00000467124 ZNF787Q6DD87 383 aa6.3□□□□□ -1.4
VPS13A-209ENST00000467124 ADAMTSL4Q6UY14 1074 aa6.3□□□□□ -1.4
VPS13A-209ENST00000467124 DPH6Q7L8W6 267 aa6.3□□□□□ -1.4
VPS13A-209ENST00000467124 FAM35AQ86V20 835 aa6.3□□□□□ -1.4
VPS13A-209ENST00000467124 FCHSD1Q86WN1 690 aa6.3□□□□□ -1.4
VPS13A-209ENST00000467124 NXPE3Q969Y0 559 aa6.3□□□□□ -1.4
VPS13A-209ENST00000467124 GPRASP2Q96D09 838 aa6.3□□□□□ -1.4
VPS13A-209ENST00000467124 GPN3Q9UHW5 284 aaPredicted RBP6.3□□□□□ -1.4
VPS13A-209ENST00000467124 A0A096LPE4 126 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 A0A1W2PPZ6 126 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 FAM177BA6PVY3 158 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 SMARCA5O60264 1052 aaPredicted RBP6.29□□□□□ -1.4
VPS13A-209ENST00000467124 PAGE1O75459 146 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 PTPRAP18433 802 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 FAAP100Q0VG06 881 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 PWP1Q13610 501 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 CEP135Q66GS9 1140 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 MCF2L2Q86YR7 1114 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
VPS13A-209ENST00000467124 MICALL1Q8N3F8 863 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 PLD4Q96BZ4 506 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.29□□□□□ -1.41e-9■□□□□ 10.1
VPS13A-209ENST00000467124 COL25A1Q9BXS0 654 aaPredicted RBP6.29□□□□□ -1.4
VPS13A-209ENST00000467124 LNPKQ9C0E8 428 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 GGA1Q9UJY5 639 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 NAGPAQ9UK23 515 aa6.29□□□□□ -1.4
VPS13A-209ENST00000467124 NEURL1BA8MQ27 555 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 PF4P02776 101 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 EPXP11678 715 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 CDC25BP30305 580 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 SV2BQ7L1I2 683 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 VPS37DQ86XT2 251 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 KIAA0825Q8IV33 1275 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 GPR161Q8N6U8 529 aaKnown RBP6.28□□□□□ -1.4
VPS13A-209ENST00000467124 ZNF296Q8WUU4 475 aaPredicted RBP6.28□□□□□ -1.4
VPS13A-209ENST00000467124 BSNDQ8WZ55 320 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 TMEM74Q96NL1 305 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 POP1Q99575 1024 aaKnown RBP6.28□□□□□ -1.4
VPS13A-209ENST00000467124 LACRTQ9GZZ8 138 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 MUC3BQ9H195 1237 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 ZNF576Q9H609 170 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 KLF15Q9UIH9 416 aa6.28□□□□□ -1.4
VPS13A-209ENST00000467124 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 TLR3O15455 904 aaKnown RBP6.27□□□□□ -1.41
VPS13A-209ENST00000467124 EIF4A3P38919 411 aaKnown RBP6.27□□□□□ -1.41
VPS13A-209ENST00000467124 NASPP49321 788 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-209ENST00000467124 LIG3P49916 1009 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 PERM1Q5SV97 790 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 FBXL19Q6PCT2 694 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-209ENST00000467124 LPIN3Q9BQK8 851 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 RSRP1Q9BUV0 290 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 ADAM19Q9H013 955 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 CLEC4MQ9H2X3 399 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-209ENST00000467124 SEC31BQ9NQW1 1179 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 UBP1Q9NZI7 540 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 EFR3BQ9Y2G0 817 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 MRVI1Q9Y6F6 885 aa6.27□□□□□ -1.41
VPS13A-209ENST00000467124 ENC1O14682 589 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 FGRP09769 529 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 SLURP2P0DP57 97 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 ATF4P18848 351 aaPredicted RBP6.26□□□□□ -1.41
VPS13A-209ENST00000467124 GJA8P48165 433 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 RNFT1Q5M7Z0 435 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 SNAP47Q5SQN1 464 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 TTBK2Q6IQ55 1244 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 GIMAP6Q6P9H5 292 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 PHC3Q8NDX5 983 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 GMLQ99445 158 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 SMG9Q9H0W8 520 aaKnown RBP6.26□□□□□ -1.41
VPS13A-209ENST00000467124 PRDM6Q9NQX0 595 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 SH2B1Q9NRF2 756 aaPredicted RBP6.26□□□□□ -1.41
VPS13A-209ENST00000467124 GINM1Q9NU53 330 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 SOX13Q9UN79 622 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 TRIM33Q9UPN9 1127 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 PCDHB5Q9Y5E4 795 aa6.26□□□□□ -1.41
VPS13A-209ENST00000467124 ERBB4Q15303 1308 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 STK10O94804 968 aaKnown RBP6.25□□□□□ -1.41
VPS13A-209ENST00000467124 ADAMTS2O95450 1211 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 B3GALT4O96024 378 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 CABP4P57796 275 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 PPP2R3AQ06190 1150 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 CCDC144BQ3MJ40 725 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 RASIP1Q5U651 963 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 PSAPL1Q6NUJ1 521 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 GOLM1Q8NBJ4 401 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 FBXO27Q8NI29 283 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 DDX54Q8TDD1 881 aaKnown RBP6.25□□□□□ -1.41
VPS13A-209ENST00000467124 DCAF11Q8TEB1 546 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 JARID2Q92833 1246 aaPredicted RBP6.25□□□□□ -1.41
VPS13A-209ENST00000467124 WNT8BQ93098 351 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 NECAB3Q96P71 396 aaPredicted RBP6.25□□□□□ -1.41
VPS13A-209ENST00000467124 SAMM50Q9Y512 469 aa6.25□□□□□ -1.41
VPS13A-209ENST00000467124 RGS9O75916 674 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-209ENST00000467124 SSBP05455 408 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS13A-209ENST00000467124 TFE3P19532 575 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-209ENST00000467124 CRKP46108 304 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms