RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 CHAF1AQ13111 956 aaPredicted RBP17.76■□□□□ 0.43
DNMT3A-208ENST00000466601 AGBL3Q8NEM8 1001 aa17.76■□□□□ 0.43
DNMT3A-208ENST00000466601 DPF2Q92785 391 aa17.76■□□□□ 0.43
DNMT3A-208ENST00000466601 GCC1Q96CN9 775 aa17.76■□□□□ 0.43
DNMT3A-208ENST00000466601 MXD3Q9BW11 206 aa17.76■□□□□ 0.43
DNMT3A-208ENST00000466601 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
DNMT3A-208ENST00000466601 DBNLQ9UJU6 430 aaKnown RBP17.76■□□□□ 0.43
DNMT3A-208ENST00000466601 PSME4Q14997 1843 aa17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 SEMA3EO15041 775 aa17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 SMARCA5O60264 1052 aaPredicted RBP17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 IGHDP01880 384 aa17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 FKBP1AP62942 108 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 GMLQ99445 158 aa17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 TLR7Q9NYK1 1049 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 GPRC5DQ9NZD1 345 aa17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 CNOT7Q9UIV1 285 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 HACL1Q9UJ83 578 aa17.75■□□□□ 0.43
DNMT3A-208ENST00000466601 MYO3BQ8WXR4 1341 aa17.74■□□□□ 0.43
DNMT3A-208ENST00000466601 ZBTB22O15209 634 aa17.74■□□□□ 0.43
DNMT3A-208ENST00000466601 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
DNMT3A-208ENST00000466601 EPS15P42566 896 aa17.74■□□□□ 0.43
DNMT3A-208ENST00000466601 DENND2AQ9ULE3 1009 aa17.74■□□□□ 0.43
DNMT3A-208ENST00000466601 UQCRFS1P1P0C7P4 283 aa17.73■□□□□ 0.43
DNMT3A-208ENST00000466601 ARID4AP29374 1257 aaPredicted RBP17.73■□□□□ 0.43
DNMT3A-208ENST00000466601 TTC39AQ5SRH9 613 aa17.73■□□□□ 0.43
DNMT3A-208ENST00000466601 MICALL2Q8IY33 904 aa17.73■□□□□ 0.43
DNMT3A-208ENST00000466601 CERS5Q8N5B7 392 aa17.73■□□□□ 0.43
DNMT3A-208ENST00000466601 TAF1DQ9H5J8 278 aaPredicted RBP17.73■□□□□ 0.43
DNMT3A-208ENST00000466601 SHTN1A0MZ66 631 aa17.72■□□□□ 0.43
DNMT3A-208ENST00000466601 H7C1D1 291 aa17.72■□□□□ 0.43
DNMT3A-208ENST00000466601 KIF3CO14782 793 aa17.72■□□□□ 0.43
DNMT3A-208ENST00000466601 EPHX2P34913 555 aa17.72■□□□□ 0.43
DNMT3A-208ENST00000466601 RASGRF1Q13972 1273 aa17.72■□□□□ 0.43
DNMT3A-208ENST00000466601 MFSD14BQ5SR56 506 aa17.72■□□□□ 0.43
DNMT3A-208ENST00000466601 ANKRD45Q5TZF3 282 aa17.72■□□□□ 0.43
DNMT3A-208ENST00000466601 WDR66Q8TBY9 1149 aa17.72■□□□□ 0.43
DNMT3A-208ENST00000466601 TBC1D22AQ8WUA7 517 aa17.72■□□□□ 0.43
DNMT3A-208ENST00000466601 ZNF646O15015 1829 aaPredicted RBP17.71■□□□□ 0.43
DNMT3A-208ENST00000466601 SCN4AP35499 1836 aa17.71■□□□□ 0.43
DNMT3A-208ENST00000466601 USP17L8P0C7I0 530 aa17.71■□□□□ 0.43
DNMT3A-208ENST00000466601 KIAA0825Q8IV33 1275 aa17.71■□□□□ 0.43
DNMT3A-208ENST00000466601 SMC5Q8IY18 1101 aa17.71■□□□□ 0.43
DNMT3A-208ENST00000466601 ZNF512BQ96KM6 892 aaPredicted RBP17.71■□□□□ 0.43
DNMT3A-208ENST00000466601 ADARB2Q9NS39 739 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-208ENST00000466601 ZBTB47Q9UFB7 747 aaPredicted RBP17.71■□□□□ 0.43
DNMT3A-208ENST00000466601 COL1A1P02452 1464 aaPredicted RBP17.7■□□□□ 0.42
DNMT3A-208ENST00000466601 MCAMP43121 646 aa17.7■□□□□ 0.42
DNMT3A-208ENST00000466601 SCARF1Q14162 830 aa17.7■□□□□ 0.42
DNMT3A-208ENST00000466601 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
DNMT3A-208ENST00000466601 OGFOD1Q8N543 542 aa17.7■□□□□ 0.42
DNMT3A-208ENST00000466601 SPATA5Q8NB90 893 aa17.7■□□□□ 0.42
DNMT3A-208ENST00000466601 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
DNMT3A-208ENST00000466601 PDS5AQ29RF7 1337 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-208ENST00000466601 F8W031 263 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-208ENST00000466601 MMP14P50281 582 aa17.69■□□□□ 0.42
DNMT3A-208ENST00000466601 ZNF280AP59817 542 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-208ENST00000466601 PNMA8AQ86V59 439 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-208ENST00000466601 HDAC9Q9UKV0 1011 aa17.69■□□□□ 0.42
DNMT3A-208ENST00000466601 GRIK5Q16478 980 aa17.68■□□□□ 0.42
DNMT3A-208ENST00000466601 EAPPQ56P03 285 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-208ENST00000466601 RBM26Q5T8P6 1007 aaKnown RBP17.68■□□□□ 0.42
DNMT3A-208ENST00000466601 B4GALNT3Q6L9W6 998 aa17.68■□□□□ 0.42
DNMT3A-208ENST00000466601 PI16Q6UXB8 463 aa17.68■□□□□ 0.42
DNMT3A-208ENST00000466601 USP50Q70EL3 339 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-208ENST00000466601 SAMD7Q7Z3H4 446 aa17.68■□□□□ 0.42
DNMT3A-208ENST00000466601 SUGT1Q9Y2Z0 365 aa17.68■□□□□ 0.42
DNMT3A-208ENST00000466601 SALL1Q9NSC2 1324 aa17.68■□□□□ 0.42
DNMT3A-208ENST00000466601 MYH13Q9UKX3 1938 aa17.67■□□□□ 0.42
DNMT3A-208ENST00000466601 TBC1D10BQ4KMP7 808 aaPredicted RBP17.67■□□□□ 0.42
DNMT3A-208ENST00000466601 ZGPATQ8N5A5 531 aaKnown RBP17.67■□□□□ 0.42
DNMT3A-208ENST00000466601 TRPM4Q8TD43 1214 aa17.67■□□□□ 0.42
DNMT3A-208ENST00000466601 MYOZ2Q9NPC6 264 aa17.67■□□□□ 0.42
DNMT3A-208ENST00000466601 SNRKQ9NRH2 765 aa17.67■□□□□ 0.42
DNMT3A-208ENST00000466601 TTF2Q9UNY4 1162 aaKnown RBP17.67■□□□□ 0.42
DNMT3A-208ENST00000466601 EGFRP00533 1210 aa17.66■□□□□ 0.42
DNMT3A-208ENST00000466601 KIF4BQ2VIQ3 1234 aa17.66■□□□□ 0.42
DNMT3A-208ENST00000466601 ABCF2Q9UG63 623 aa17.66■□□□□ 0.42
DNMT3A-208ENST00000466601 LDHBP07195 334 aaKnown RBP17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 ATP5JP18859 108 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 PRDX5P30044 214 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 ZAP70P43403 619 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 HIRAP54198 1017 aaPredicted RBP17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 NUCB1Q02818 461 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 GPATCH3Q96I76 525 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 LNPKQ9C0E8 428 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 ECHDC1Q9NTX5 307 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 CLEC11AQ9Y240 323 aa17.65■□□□□ 0.42
DNMT3A-208ENST00000466601 TOMM70O94826 608 aa17.64■□□□□ 0.41
DNMT3A-208ENST00000466601 SPTY2D1Q68D10 685 aaPredicted RBP17.64■□□□□ 0.41
DNMT3A-208ENST00000466601 TBC1D9Q6ZT07 1266 aa17.64■□□□□ 0.41
DNMT3A-208ENST00000466601 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.41
DNMT3A-208ENST00000466601 CHD1LQ86WJ1 897 aa17.64■□□□□ 0.41
DNMT3A-208ENST00000466601 LDHDQ86WU2 507 aa17.64■□□□□ 0.41
DNMT3A-208ENST00000466601 MAST3O60307 1309 aa17.64■□□□□ 0.41
DNMT3A-208ENST00000466601 CYP2E1P05181 493 aaPredicted RBP17.63■□□□□ 0.41
DNMT3A-208ENST00000466601 HDLBPQ00341 1268 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms