RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-205ENST00000466260 PNMA6EA0A0J9YXQ4 647 aa12.11□□□□□ -0.47
RTFDC1-205ENST00000466260 FRAT2O75474 233 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-205ENST00000466260 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-205ENST00000466260 DACT2Q5SW24 774 aa12.11□□□□□ -0.47
RTFDC1-205ENST00000466260 STRIP1Q5VSL9 837 aa12.11□□□□□ -0.47
RTFDC1-205ENST00000466260 VGLL2Q8N8G2 317 aa12.11□□□□□ -0.47
RTFDC1-205ENST00000466260 AGBL3Q8NEM8 1001 aa12.11□□□□□ -0.47
RTFDC1-205ENST00000466260 ITGBL1O95965 494 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 IFIT1P09914 478 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 SLC5A1P13866 664 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 HIBADHP31937 336 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 DLK2Q6UY11 383 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 C15orf52Q6ZUT6 534 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 ATG9AQ7Z3C6 839 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 MYOZ2Q9NPC6 264 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 SCAF8Q9UPN6 1271 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 COG6Q9Y2V7 657 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 MYO3BQ8WXR4 1341 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 PASKQ96RG2 1323 aa12.1□□□□□ -0.47
RTFDC1-205ENST00000466260 ADM5C9JUS6 153 aa12.09□□□□□ -0.47
RTFDC1-205ENST00000466260 SASH1O94885 1247 aa12.09□□□□□ -0.47
RTFDC1-205ENST00000466260 IL1R1P14778 569 aa12.09□□□□□ -0.47
RTFDC1-205ENST00000466260 BCAMP50895 628 aa12.09□□□□□ -0.47
RTFDC1-205ENST00000466260 ATP2B3Q16720 1220 aa12.09□□□□□ -0.47
RTFDC1-205ENST00000466260 CAVIN4Q5BKX8 364 aa12.09□□□□□ -0.47
RTFDC1-205ENST00000466260 FAM84BQ96KN1 310 aaPredicted RBP12.09□□□□□ -0.47
RTFDC1-205ENST00000466260 CEP126Q9P2H0 1117 aa12.09□□□□□ -0.47
RTFDC1-205ENST00000466260 MKRN1Q9UHC7 482 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-205ENST00000466260 CIAO1O76071 339 aa12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 IL15P40933 162 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 OS9Q13438 667 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 SCARF1Q14162 830 aa12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 ANGEL2Q5VTE6 544 aaKnown RBP12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 OGFOD1Q8N543 542 aa12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 CERS5Q8N5B7 392 aa12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 DCPSQ96C86 337 aaKnown RBP12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 GMLQ99445 158 aa12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 COPRSQ9NQ92 184 aa12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 HDAC9Q9UKV0 1011 aa12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 ABT1Q9ULW3 272 aaKnown RBP12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 ZNF609O15014 1411 aa12.08□□□□□ -0.48
RTFDC1-205ENST00000466260 TMEM88BA6NKF7 163 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 MS4A1P11836 297 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 FGFR2P21802 821 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 RBM5P52756 815 aaKnown RBP eCLIP12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 TFCP2Q12800 502 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 GRM1Q13255 1194 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 MTX1Q13505 466 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 MVPQ14764 893 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 NBPF9Q3BBW0 867 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 MFSD14BQ5SR56 506 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 C20orf194Q5TEA3 1177 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 KRT26Q7Z3Y9 468 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 TDRD7Q8NHU6 1098 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 LPIN2Q92539 896 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
RTFDC1-205ENST00000466260 CELF2O95319 508 aaKnown RBP12.06□□□□□ -0.48
RTFDC1-205ENST00000466260 ADORA1P30542 326 aa12.06□□□□□ -0.48
RTFDC1-205ENST00000466260 ZNF280AP59817 542 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-205ENST00000466260 G3BP1Q13283 466 aaKnown RBP eCLIP12.06□□□□□ -0.48
RTFDC1-205ENST00000466260 CDC37L1Q7L3B6 337 aa12.06□□□□□ -0.48
RTFDC1-205ENST00000466260 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
RTFDC1-205ENST00000466260 NEUROD6Q96NK8 337 aa12.06□□□□□ -0.48
RTFDC1-205ENST00000466260 BCL11AQ9H165 835 aa12.06□□□□□ -0.48
RTFDC1-205ENST00000466260 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
RTFDC1-205ENST00000466260 WNT10BO00744 389 aa12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 NEFLP07196 543 aa12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 TIMM10P62072 90 aa12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 FBXO33Q7Z6M2 555 aa12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 ZC3H15Q8WU90 426 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 DDX19BQ9UMR2 479 aa12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 TTF2Q9UNY4 1162 aaKnown RBP12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 COL1A1P02452 1464 aaPredicted RBP12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 MYH2Q9UKX2 1941 aa12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 FAM205AQ6ZU69 1335 aa12.05□□□□□ -0.48
RTFDC1-205ENST00000466260 MYO5AQ9Y4I1 1855 aaKnown RBP12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 AK9Q5TCS8 1911 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 A0A1B0GUL7 405 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 CLRN2A0PK11 232 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 SURF6O75683 361 aaKnown RBP12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 PHKA1P46020 1223 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 ATP8B2P98198 1209 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 DLGAP5Q15398 846 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 GRIK5Q16478 980 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 CFAP100Q494V2 611 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 CEP85Q6P2H3 762 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 PGAP2Q9UHJ9 254 aa12.04□□□□□ -0.48
RTFDC1-205ENST00000466260 PRAMEF18Q5VWM3 479 aa12.03□□□□□ -0.48
RTFDC1-205ENST00000466260 CST9Q5W186 159 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms