RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 MYO3BQ8WXR4 1341 aa28.43■■■□□ 2.14
SNX21-208ENST00000466252 USP17L8P0C7I0 530 aa28.43■■■□□ 2.14
SNX21-208ENST00000466252 PHKA1P46020 1223 aa28.43■■■□□ 2.14
SNX21-208ENST00000466252 HSP90AB4PQ58FF6 505 aa28.43■■■□□ 2.14
SNX21-208ENST00000466252 CCDC102BQ68D86 513 aa28.43■■■□□ 2.14
SNX21-208ENST00000466252 SAMD7Q7Z3H4 446 aa28.43■■■□□ 2.14
SNX21-208ENST00000466252 NEUROD6Q96NK8 337 aa28.43■■■□□ 2.14
SNX21-208ENST00000466252 EGFRP00533 1210 aa28.42■■■□□ 2.14
SNX21-208ENST00000466252 EAPPQ56P03 285 aaPredicted RBP28.42■■■□□ 2.14
SNX21-208ENST00000466252 TNNI3KQ59H18 835 aa28.42■■■□□ 2.14
SNX21-208ENST00000466252 LDHDQ86WU2 507 aa28.42■■■□□ 2.14
SNX21-208ENST00000466252 PGAP2Q9UHJ9 254 aa28.42■■■□□ 2.14
SNX21-208ENST00000466252 JAG2Q9Y219 1238 aa28.42■■■□□ 2.14
SNX21-208ENST00000466252 FPGT-TNNI3KV9GXZ4 949 aa28.42■■■□□ 2.14
SNX21-208ENST00000466252 ADAMTSL1Q8N6G6 1762 aa28.42■■■□□ 2.14
SNX21-208ENST00000466252 ERC1Q8IUD2 1116 aa28.41■■■□□ 2.14
SNX21-208ENST00000466252 RHPN1Q8TCX5 695 aa28.41■■■□□ 2.14
SNX21-208ENST00000466252 TRPM4Q8TD43 1214 aa28.41■■■□□ 2.14
SNX21-208ENST00000466252 EAF2Q96CJ1 260 aaPredicted RBP28.41■■■□□ 2.14
SNX21-208ENST00000466252 ARAP2Q8WZ64 1704 aa28.4■■■□□ 2.14
SNX21-208ENST00000466252 MMP14P50281 582 aa28.4■■■□□ 2.14
SNX21-208ENST00000466252 FSTL1Q12841 308 aa28.4■■■□□ 2.14
SNX21-208ENST00000466252 AAMPQ13685 434 aa28.4■■■□□ 2.14
SNX21-208ENST00000466252 CHADLQ6NUI6 762 aa28.4■■■□□ 2.14
SNX21-208ENST00000466252 SMC1BQ8NDV3 1235 aa28.4■■■□□ 2.14
SNX21-208ENST00000466252 DCTPP1Q9H773 170 aa28.4■■■□□ 2.14
SNX21-208ENST00000466252 RAB11FIP3O75154 756 aa28.39■■■□□ 2.14
SNX21-208ENST00000466252 EXOC6Q8TAG9 804 aa28.39■■■□□ 2.14
SNX21-208ENST00000466252 TBC1D10BQ4KMP7 808 aaPredicted RBP28.38■■■□□ 2.13
SNX21-208ENST00000466252 KIAA0825Q8IV33 1275 aa28.38■■■□□ 2.13
SNX21-208ENST00000466252 GNL3LQ9NVN8 582 aaKnown RBP28.38■■■□□ 2.13
SNX21-208ENST00000466252 CLEC11AQ9Y240 323 aa28.38■■■□□ 2.13
SNX21-208ENST00000466252 POLR2AP24928 1970 aaKnown RBP28.38■■■□□ 2.13
SNX21-208ENST00000466252 SEMA3EO15041 775 aa28.37■■■□□ 2.13
SNX21-208ENST00000466252 FRAT2O75474 233 aaPredicted RBP28.37■■■□□ 2.13
SNX21-208ENST00000466252 GRIK5Q16478 980 aa28.37■■■□□ 2.13
SNX21-208ENST00000466252 MFSD14BQ5SR56 506 aa28.37■■■□□ 2.13
SNX21-208ENST00000466252 RBM26Q5T8P6 1007 aaKnown RBP28.37■■■□□ 2.13
SNX21-208ENST00000466252 ZC3H15Q8WU90 426 aaKnown RBP28.37■■■□□ 2.13
SNX21-208ENST00000466252 MYOZ2Q9NPC6 264 aa28.37■■■□□ 2.13
SNX21-208ENST00000466252 ITGBL1O95965 494 aaPredicted RBP28.36■■■□□ 2.13
SNX21-208ENST00000466252 CHAF1AQ13111 956 aaPredicted RBP28.36■■■□□ 2.13
SNX21-208ENST00000466252 OGFOD1Q8N543 542 aa28.36■■■□□ 2.13
SNX21-208ENST00000466252 KIF1BPQ96EK5 621 aa28.36■■■□□ 2.13
SNX21-208ENST00000466252 DBNDD2Q9BQY9 259 aa28.36■■■□□ 2.13
SNX21-208ENST00000466252 TBC1D22AQ8WUA7 517 aa28.35■■■□□ 2.13
SNX21-208ENST00000466252 CCDC8Q9H0W5 538 aaPredicted RBP28.35■■■□□ 2.13
SNX21-208ENST00000466252 DENND2AQ9ULE3 1009 aa28.35■■■□□ 2.13
SNX21-208ENST00000466252 KIF4BQ2VIQ3 1234 aa28.34■■■□□ 2.13
SNX21-208ENST00000466252 WDR66Q8TBY9 1149 aa28.34■■■□□ 2.13
SNX21-208ENST00000466252 ZBED3Q96IU2 234 aaPredicted RBP28.34■■■□□ 2.13
SNX21-208ENST00000466252 IL1RAPL2Q9NP60 686 aa28.34■■■□□ 2.13
SNX21-208ENST00000466252 DBNLQ9UJU6 430 aaKnown RBP28.34■■■□□ 2.13
SNX21-208ENST00000466252 MYH13Q9UKX3 1938 aa28.33■■■□□ 2.13
SNX21-208ENST00000466252 ARID4AP29374 1257 aaPredicted RBP28.33■■■□□ 2.13
SNX21-208ENST00000466252 RASGRF1Q13972 1273 aa28.33■■■□□ 2.13
SNX21-208ENST00000466252 MAP1SQ66K74 1059 aaPredicted RBP28.33■■■□□ 2.13
SNX21-208ENST00000466252 CNTROBQ8N137 903 aa28.33■■■□□ 2.13
SNX21-208ENST00000466252 COL1A1P02452 1464 aaPredicted RBP28.33■■■□□ 2.13
SNX21-208ENST00000466252 APBB1O00213 710 aa28.32■■■□□ 2.12
SNX21-208ENST00000466252 GORABQ5T7V8 394 aa28.32■■■□□ 2.12
SNX21-208ENST00000466252 MTMR14Q8NCE2 650 aa28.32■■■□□ 2.12
SNX21-208ENST00000466252 ZNF512BQ96KM6 892 aaPredicted RBP28.32■■■□□ 2.12
SNX21-208ENST00000466252 TLR7Q9NYK1 1049 aaKnown RBP28.32■■■□□ 2.12
SNX21-208ENST00000466252 HDAC9Q9UKV0 1011 aa28.32■■■□□ 2.12
SNX21-208ENST00000466252 F8W031 263 aaPredicted RBP28.31■■■□□ 2.12
SNX21-208ENST00000466252 SCARF1Q14162 830 aa28.31■■■□□ 2.12
SNX21-208ENST00000466252 MRIQ9BWK5 157 aa28.31■■■□□ 2.12
SNX21-208ENST00000466252 HMG20BQ9P0W2 317 aa28.31■■■□□ 2.12
SNX21-208ENST00000466252 SUGT1Q9Y2Z0 365 aa28.31■■■□□ 2.12
SNX21-208ENST00000466252 PDS5AQ29RF7 1337 aaKnown RBP28.3■■■□□ 2.12
SNX21-208ENST00000466252 SALL1Q9NSC2 1324 aa28.3■■■□□ 2.12
SNX21-208ENST00000466252 WNT10BO00744 389 aa28.3■■■□□ 2.12
SNX21-208ENST00000466252 NBPF9Q3BBW0 867 aa28.3■■■□□ 2.12
SNX21-208ENST00000466252 CLASRPQ8N2M8 674 aaKnown RBP28.3■■■□□ 2.12
SNX21-208ENST00000466252 TTF2Q9UNY4 1162 aaKnown RBP28.3■■■□□ 2.12
SNX21-208ENST00000466252 ASTN2O75129 1339 aaPredicted RBP28.29■■■□□ 2.12
SNX21-208ENST00000466252 UQCRFS1P1P0C7P4 283 aa28.29■■■□□ 2.12
SNX21-208ENST00000466252 HDAC1Q13547 482 aaPredicted RBP28.29■■■□□ 2.12
SNX21-208ENST00000466252 CCDC158Q5M9N0 1113 aa28.29■■■□□ 2.12
SNX21-208ENST00000466252 AACSQ86V21 672 aa28.29■■■□□ 2.12
SNX21-208ENST00000466252 AKAP11Q9UKA4 1901 aa28.29■■■□□ 2.12
SNX21-208ENST00000466252 MCAMP43121 646 aa28.28■■■□□ 2.12
SNX21-208ENST00000466252 LRRCC1Q9C099 1032 aa28.28■■■□□ 2.12
SNX21-208ENST00000466252 PCDHAC2Q9Y5I4 1007 aa28.28■■■□□ 2.12
SNX21-208ENST00000466252 PASKQ96RG2 1323 aa28.27■■■□□ 2.12
SNX21-208ENST00000466252 IRX6P78412 446 aaPredicted RBP28.27■■■□□ 2.12
SNX21-208ENST00000466252 HDLBPQ00341 1268 aaKnown RBP28.27■■■□□ 2.12
SNX21-208ENST00000466252 PRMT6Q96LA8 375 aaPredicted RBP28.27■■■□□ 2.12
SNX21-208ENST00000466252 SERPINA10Q9UK55 444 aa28.27■■■□□ 2.12
SNX21-208ENST00000466252 CFAP100Q494V2 611 aa28.26■■■□□ 2.11
SNX21-208ENST00000466252 SPATA5Q8NB90 893 aa28.26■■■□□ 2.11
SNX21-208ENST00000466252 SMARCA5O60264 1052 aaPredicted RBP28.25■■■□□ 2.11
SNX21-208ENST00000466252 DLGAP5Q15398 846 aa28.25■■■□□ 2.11
SNX21-208ENST00000466252 TTC39AQ5SRH9 613 aa28.25■■■□□ 2.11
SNX21-208ENST00000466252 PI16Q6UXB8 463 aa28.25■■■□□ 2.11
SNX21-208ENST00000466252 CDC37L1Q7L3B6 337 aa28.25■■■□□ 2.11
SNX21-208ENST00000466252 HSPA6P17066 643 aa28.24■■■□□ 2.11
SNX21-208ENST00000466252 PRDX5P30044 214 aa28.24■■■□□ 2.11
SNX21-208ENST00000466252 CRKP46108 304 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms