RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 NBPF9Q3BBW0 867 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 CAVIN4Q5BKX8 364 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 CST9Q5W186 159 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 CDC37L1Q7L3B6 337 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 KRT26Q7Z3Y9 468 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 OGFOD1Q8N543 542 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
CD40-204ENST00000466205 PGAP2Q9UHJ9 254 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
CD40-204ENST00000466205 TDRD7Q8NHU6 1098 aaKnown RBP12.67□□□□□ -0.38
CD40-204ENST00000466205 HDAC9Q9UKV0 1011 aa12.67□□□□□ -0.38
CD40-204ENST00000466205 ZNF609O15014 1411 aa12.67□□□□□ -0.38
CD40-204ENST00000466205 CIAO1O76071 339 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 IFIT1P09914 478 aaKnown RBP12.66□□□□□ -0.38
CD40-204ENST00000466205 SLC5A1P13866 664 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 FGFR2P21802 821 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 RBM5P52756 815 aaKnown RBP eCLIP12.66□□□□□ -0.38
CD40-204ENST00000466205 GRIK5Q16478 980 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 ATP2B3Q16720 1220 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 MFSD14BQ5SR56 506 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 PRAMEF18Q5VWM3 479 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 SULF1Q8IWU6 871 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 CEP126Q9P2H0 1117 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.66□□□□□ -0.38
CD40-204ENST00000466205 CNTNAP1P78357 1384 aa12.66□□□□□ -0.38
CD40-204ENST00000466205 WNT10BO00744 389 aa12.65□□□□□ -0.38
CD40-204ENST00000466205 ZBTB7BO15156 539 aaPredicted RBP12.65□□□□□ -0.38
CD40-204ENST00000466205 ADORA1P30542 326 aa12.65□□□□□ -0.38
CD40-204ENST00000466205 IL15P40933 162 aaPredicted RBP12.65□□□□□ -0.38
CD40-204ENST00000466205 TFCP2Q12800 502 aa12.65□□□□□ -0.38
CD40-204ENST00000466205 DEFB115Q30KQ5 88 aa12.65□□□□□ -0.38
CD40-204ENST00000466205 FBXO33Q7Z6M2 555 aa12.65□□□□□ -0.38
CD40-204ENST00000466205 LPIN2Q92539 896 aa12.65□□□□□ -0.38
CD40-204ENST00000466205 COPRSQ9NQ92 184 aa12.65□□□□□ -0.38
CD40-204ENST00000466205 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
CD40-204ENST00000466205 CLRN2A0PK11 232 aa12.64□□□□□ -0.39
CD40-204ENST00000466205 VEGFBP49765 207 aa12.64□□□□□ -0.39
CD40-204ENST00000466205 TIMM10P62072 90 aa12.64□□□□□ -0.39
CD40-204ENST00000466205 MTX1Q13505 466 aa12.64□□□□□ -0.39
CD40-204ENST00000466205 CFAP100Q494V2 611 aa12.64□□□□□ -0.39
CD40-204ENST00000466205 CYP4F22Q6NT55 531 aa12.64□□□□□ -0.39
CD40-204ENST00000466205 CDCA5Q96FF9 252 aa12.64□□□□□ -0.39
CD40-204ENST00000466205 TTF2Q9UNY4 1162 aaKnown RBP12.64□□□□□ -0.39
CD40-204ENST00000466205 AOX1Q06278 1338 aa12.63□□□□□ -0.39
CD40-204ENST00000466205 FAM205AQ6ZU69 1335 aa12.63□□□□□ -0.39
CD40-204ENST00000466205 DLGAP5Q15398 846 aa12.63□□□□□ -0.39
CD40-204ENST00000466205 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
CD40-204ENST00000466205 TLL2Q9Y6L7 1015 aa12.63□□□□□ -0.39
CD40-204ENST00000466205 TRPM7Q96QT4 1865 aa12.63□□□□□ -0.39
CD40-204ENST00000466205 COL1A1P02452 1464 aaPredicted RBP12.62□□□□□ -0.39
CD40-204ENST00000466205 A0A1B0GUL7 405 aa12.62□□□□□ -0.39
CD40-204ENST00000466205 RASSF10A6NK89 507 aa12.62□□□□□ -0.39
CD40-204ENST00000466205 PHKA1P46020 1223 aa12.62□□□□□ -0.39
CD40-204ENST00000466205 ATP8B2P98198 1209 aa12.62□□□□□ -0.39
CD40-204ENST00000466205 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.39
CD40-204ENST00000466205 OS9Q13438 667 aaPredicted RBP12.62□□□□□ -0.39
CD40-204ENST00000466205 JMYQ8N9B5 988 aa12.62□□□□□ -0.39
CD40-204ENST00000466205 PRMT6Q96LA8 375 aaPredicted RBP12.62□□□□□ -0.39
CD40-204ENST00000466205 NEUROD6Q96NK8 337 aa12.62□□□□□ -0.39
CD40-204ENST00000466205 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
CD40-204ENST00000466205 VEZTQ9HBM0 779 aa12.62□□□□□ -0.39
CD40-204ENST00000466205 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
CD40-204ENST00000466205 POLR2AP24928 1970 aaKnown RBP12.61□□□□□ -0.39
CD40-204ENST00000466205 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
CD40-204ENST00000466205 HSPA1AP0DMV8 641 aaKnown RBP12.61□□□□□ -0.39
CD40-204ENST00000466205 HSPA1BP0DMV9 641 aaKnown RBP12.61□□□□□ -0.39
CD40-204ENST00000466205 FKBP1AP62942 108 aaKnown RBP12.61□□□□□ -0.39
CD40-204ENST00000466205 PRKG1Q13976 671 aa12.61□□□□□ -0.39
CD40-204ENST00000466205 MVPQ14764 893 aaKnown RBP12.61□□□□□ -0.39
CD40-204ENST00000466205 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
CD40-204ENST00000466205 SAPCD2Q86UD0 394 aa12.61□□□□□ -0.39
CD40-204ENST00000466205 GBA2Q9HCG7 927 aaPredicted RBP12.61□□□□□ -0.39
CD40-204ENST00000466205 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
CD40-204ENST00000466205 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
CD40-204ENST00000466205 WDR33Q9C0J8 1336 aaKnown RBP12.61□□□□□ -0.39
CD40-204ENST00000466205 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 AOC2O75106 756 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 CRKP46108 304 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 HUNKP57058 714 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 POLA2Q14181 598 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 CEP85Q6P2H3 762 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 CAPNS2Q96L46 248 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 TDRD3Q9H7E2 651 aaKnown RBP12.6□□□□□ -0.39
CD40-204ENST00000466205 PITPNM2Q9BZ72 1349 aa12.6□□□□□ -0.39
CD40-204ENST00000466205 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
CD40-204ENST00000466205 MYO1BO43795 1136 aa12.59□□□□□ -0.39
CD40-204ENST00000466205 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
CD40-204ENST00000466205 MS4A1P11836 297 aa12.59□□□□□ -0.39
CD40-204ENST00000466205 TTLL12Q14166 644 aaPredicted RBP12.59□□□□□ -0.39
CD40-204ENST00000466205 C2orf69Q8N8R5 385 aa12.59□□□□□ -0.39
CD40-204ENST00000466205 SSH3Q8TE77 659 aa12.59□□□□□ -0.39
CD40-204ENST00000466205 ZBED3Q96IU2 234 aaPredicted RBP12.59□□□□□ -0.39
CD40-204ENST00000466205 MYH13Q9UKX3 1938 aa12.58□□□□□ -0.39
CD40-204ENST00000466205 APBB1O00213 710 aa12.58□□□□□ -0.4
CD40-204ENST00000466205 CACNB3P54284 484 aa12.58□□□□□ -0.4
CD40-204ENST00000466205 GORABQ5T7V8 394 aa12.58□□□□□ -0.4
CD40-204ENST00000466205 APOBEC3FQ8IUX4 373 aaKnown RBP12.58□□□□□ -0.4
CD40-204ENST00000466205 TBC1D22AQ8WUA7 517 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms