RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 DTX1Q86Y01 620 aa4.88□□□□□ -1.63
CCDC93-205ENST00000466171 SHKBP1Q8TBC3 707 aa4.88□□□□□ -1.63
CCDC93-205ENST00000466171 ZMYND15Q9H091 742 aa4.88□□□□□ -1.63
CCDC93-205ENST00000466171 ATG3Q9NT62 314 aa4.88□□□□□ -1.63
CCDC93-205ENST00000466171 DZANK1Q9NVP4 752 aa4.88□□□□□ -1.63
CCDC93-205ENST00000466171 CNTN3Q9P232 1028 aa4.88□□□□□ -1.63
CCDC93-205ENST00000466171 MEGF11A6BM72 1044 aa4.87□□□□□ -1.63
CCDC93-205ENST00000466171 WDR64B1ANS9 1081 aa4.87□□□□□ -1.63
CCDC93-205ENST00000466171 TM4SF5O14894 197 aa4.87□□□□□ -1.63
CCDC93-205ENST00000466171 MZF1P28698 734 aaPredicted RBP4.87□□□□□ -1.63
CCDC93-205ENST00000466171 IKBKEQ14164 716 aa4.87□□□□□ -1.63
CCDC93-205ENST00000466171 NUTM2GQ5VZR2 741 aa4.87□□□□□ -1.63
CCDC93-205ENST00000466171 ATCAYQ86WG3 371 aa4.87□□□□□ -1.63
CCDC93-205ENST00000466171 C1orf127Q8N9H9 656 aa4.87□□□□□ -1.63
CCDC93-205ENST00000466171 TMEM102Q8N9M5 508 aaPredicted RBP4.87□□□□□ -1.63
CCDC93-205ENST00000466171 HELQQ8TDG4 1101 aa4.87□□□□□ -1.63
CCDC93-205ENST00000466171 CYP4F12Q9HCS2 524 aa4.87□□□□□ -1.63
CCDC93-205ENST00000466171 PRR19A6NJB7 356 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 EDN3P14138 238 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 MAP4P27816 1152 aaKnown RBP4.86□□□□□ -1.63
CCDC93-205ENST00000466171 EHHADHQ08426 723 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 AAMPQ13685 434 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 ADAMTSL4Q6UY14 1074 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 C12orf50Q8NA57 414 aaPredicted RBP4.86□□□□□ -1.63
CCDC93-205ENST00000466171 BSNDQ8WZ55 320 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 OSBPL1AQ9BXW6 950 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 PIM2Q9P1W9 311 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 SEPT3Q9UH03 358 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 SERPINA10Q9UK55 444 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 SOX13Q9UN79 622 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 ANGEL1Q9UNK9 670 aaKnown RBP4.86□□□□□ -1.63
CCDC93-205ENST00000466171 MTMR7Q9Y216 660 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 LEMD3Q9Y2U8 911 aa4.86□□□□□ -1.63
CCDC93-205ENST00000466171 NFKBIEO00221 500 aa4.85□□□□□ -1.63
CCDC93-205ENST00000466171 PDGFAP04085 211 aa4.85□□□□□ -1.63
CCDC93-205ENST00000466171 USP11P51784 963 aa4.85□□□□□ -1.63
CCDC93-205ENST00000466171 CPSF6Q16630 551 aaKnown RBP eCLIP4.85□□□□□ -1.63
CCDC93-205ENST00000466171 PAOXQ6QHF9 649 aa4.85□□□□□ -1.63
CCDC93-205ENST00000466171 MFSD14AQ96MC6 490 aa4.85□□□□□ -1.63
CCDC93-205ENST00000466171 OSMRQ99650 979 aa4.85□□□□□ -1.63
CCDC93-205ENST00000466171 YIPF2Q9BWQ6 316 aa4.85□□□□□ -1.63
CCDC93-205ENST00000466171 USP26Q9BXU7 913 aa4.85□□□□□ -1.63
CCDC93-205ENST00000466171 PHACTR2O75167 634 aa4.84□□□□□ -1.63
CCDC93-205ENST00000466171 ACPPP15309 386 aa4.84□□□□□ -1.63
CCDC93-205ENST00000466171 USP5P45974 858 aa4.84□□□□□ -1.63
CCDC93-205ENST00000466171 SMG8Q8ND04 991 aaKnown RBP4.84□□□□□ -1.63
CCDC93-205ENST00000466171 ASAP3Q8TDY4 903 aa4.84□□□□□ -1.63
CCDC93-205ENST00000466171 SNX29Q8TEQ0 813 aa4.84□□□□□ -1.63
CCDC93-205ENST00000466171 NXPE3Q969Y0 559 aa4.84□□□□□ -1.63
CCDC93-205ENST00000466171 METTL22Q9BUU2 404 aaPredicted RBP4.84□□□□□ -1.63
CCDC93-205ENST00000466171 GGNBP2Q9H3C7 697 aa4.84□□□□□ -1.63
CCDC93-205ENST00000466171 SOX17Q9H6I2 414 aaPredicted RBP4.84□□□□□ -1.63
CCDC93-205ENST00000466171 FAM95CA0A1B0GW59 222 aa4.83□□□□□ -1.64
CCDC93-205ENST00000466171 SOX1O00570 391 aaPredicted RBP4.83□□□□□ -1.64
CCDC93-205ENST00000466171 ADAMTS4O75173 837 aa4.83□□□□□ -1.64
CCDC93-205ENST00000466171 TRPA1O75762 1119 aa4.83□□□□□ -1.64
CCDC93-205ENST00000466171 MPSTP25325 297 aa4.83□□□□□ -1.64
CCDC93-205ENST00000466171 EIF1AXP47813 144 aaKnown RBP4.83□□□□□ -1.64
CCDC93-205ENST00000466171 NFKBIBQ15653 356 aa4.83□□□□□ -1.64
CCDC93-205ENST00000466171 SGO2Q562F6 1265 aa4.83□□□□□ -1.64
CCDC93-205ENST00000466171 EXOSC6Q5RKV6 272 aaKnown RBP4.83□□□□□ -1.64
CCDC93-205ENST00000466171 HP1BP3Q5SSJ5 553 aaPredicted RBP4.83□□□□□ -1.64
CCDC93-205ENST00000466171 FBXL6Q8N531 539 aa4.83□□□□□ -1.64
CCDC93-205ENST00000466171 SUGCTQ9HAC7 445 aa4.83□□□□□ -1.64
CCDC93-205ENST00000466171 A6NHS1 94 aa4.82□□□□□ -1.64
CCDC93-205ENST00000466171 FOSL1P15407 271 aa4.82□□□□□ -1.64
CCDC93-205ENST00000466171 GTF3C2Q8WUA4 911 aaPredicted RBP4.82□□□□□ -1.64
CCDC93-205ENST00000466171 HHIPQ96QV1 700 aa4.82□□□□□ -1.64
CCDC93-205ENST00000466171 ZKSCAN3Q9BRR0 538 aa4.82□□□□□ -1.64
CCDC93-205ENST00000466171 TMPRSS13Q9BYE2 586 aa4.82□□□□□ -1.64
CCDC93-205ENST00000466171 CHRDQ9H2X0 955 aa4.82□□□□□ -1.64
CCDC93-205ENST00000466171 ZFYVE1Q9HBF4 777 aa4.82□□□□□ -1.64
CCDC93-205ENST00000466171 POLIQ9UNA4 740 aa4.82□□□□□ -1.64
CCDC93-205ENST00000466171 AMOTL2Q9Y2J4 779 aa4.82□□□□□ -1.64
CCDC93-205ENST00000466171 LOC100289279A0A1B0GTE1 492 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 EREGO14944 169 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 TNFRSF21O75509 655 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 FAM13AO94988 1023 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 F13BP05160 661 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 GSTM4Q03013 218 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 OGFOD2Q6N063 350 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 VN1R5Q7Z5H4 357 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 VSIG10LQ86VR7 867 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 CCER1Q8TC90 406 aaPredicted RBP4.81□□□□□ -1.64
CCDC93-205ENST00000466171 FBXL18Q96ME1 805 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 SLAIN2Q9P270 581 aa4.81□□□□□ -1.64
CCDC93-205ENST00000466171 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.81□□□□□ -1.64
CCDC93-205ENST00000466171 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
CCDC93-205ENST00000466171 CYP26A1O43174 497 aa4.8□□□□□ -1.64
CCDC93-205ENST00000466171 TIAF1O95411 115 aa4.8□□□□□ -1.64
CCDC93-205ENST00000466171 ESRRAP11474 423 aaPredicted RBP4.8□□□□□ -1.64
CCDC93-205ENST00000466171 HOXA10P31260 410 aaPredicted RBP4.8□□□□□ -1.64
CCDC93-205ENST00000466171 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
CCDC93-205ENST00000466171 HGSNATQ68CP4 663 aa4.8□□□□□ -1.64
CCDC93-205ENST00000466171 TP53INP2Q8IXH6 220 aa4.8□□□□□ -1.64
CCDC93-205ENST00000466171 DDX54Q8TDD1 881 aaKnown RBP4.8□□□□□ -1.64
CCDC93-205ENST00000466171 TBC1D32Q96NH3 1257 aa4.8□□□□□ -1.64
CCDC93-205ENST00000466171 BHLHE41Q9C0J9 482 aaPredicted RBP4.8□□□□□ -1.64
CCDC93-205ENST00000466171 ADGRE2Q9UHX3 823 aa4.8□□□□□ -1.64
CCDC93-205ENST00000466171 C8AP07357 584 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms