RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 ATP2B3Q16720 1220 aa32.15■■■□□ 2.74
SMC4-206ENST00000465903 ARAP2Q8WZ64 1704 aa32.14■■■□□ 2.74
SMC4-206ENST00000465903 FKBP1AP62942 108 aaKnown RBP32.14■■■□□ 2.74
SMC4-206ENST00000465903 TFCP2Q12800 502 aa32.14■■■□□ 2.74
SMC4-206ENST00000465903 KIF4BQ2VIQ3 1234 aa32.14■■■□□ 2.74
SMC4-206ENST00000465903 VPS37DQ86XT2 251 aa32.13■■■□□ 2.73
SMC4-206ENST00000465903 MYOZ2Q9NPC6 264 aa32.13■■■□□ 2.73
SMC4-206ENST00000465903 IQSEC3Q9UPP2 1182 aaPredicted RBP32.13■■■□□ 2.73
SMC4-206ENST00000465903 TRPM7Q96QT4 1865 aa32.12■■■□□ 2.73
SMC4-206ENST00000465903 G3BP1Q13283 466 aaKnown RBP eCLIP32.12■■■□□ 2.73
SMC4-206ENST00000465903 KIAA0825Q8IV33 1275 aa32.12■■■□□ 2.73
SMC4-206ENST00000465903 HTRA3P83110 453 aa32.11■■■□□ 2.73
SMC4-206ENST00000465903 TIMM10P62072 90 aa32.1■■■□□ 2.73
SMC4-206ENST00000465903 FMR1Q06787 632 aaKnown RBP eCLIP32.1■■■□□ 2.736e-9■□□□□ 8.8
SMC4-206ENST00000465903 NOP58Q9Y2X3 529 aaKnown RBP32.1■■■□□ 2.73
SMC4-206ENST00000465903 ASTN2O75129 1339 aaPredicted RBP32.09■■■□□ 2.73
SMC4-206ENST00000465903 SURF6O75683 361 aaKnown RBP32.08■■■□□ 2.73
SMC4-206ENST00000465903 ADORA1P30542 326 aa32.08■■■□□ 2.73
SMC4-206ENST00000465903 MMP14P50281 582 aa32.08■■■□□ 2.73
SMC4-206ENST00000465903 OGFOD1Q8N543 542 aa32.08■■■□□ 2.73
SMC4-206ENST00000465903 GLIS2Q9BZE0 524 aaPredicted RBP32.08■■■□□ 2.73
SMC4-206ENST00000465903 A0A1B0GUL7 405 aa32.07■■■□□ 2.72
SMC4-206ENST00000465903 RRP1P56182 461 aaKnown RBP32.07■■■□□ 2.72
SMC4-206ENST00000465903 SCARF1Q14162 830 aa32.07■■■□□ 2.72
SMC4-206ENST00000465903 CHMP4BQ9H444 224 aaKnown RBP32.07■■■□□ 2.72
SMC4-206ENST00000465903 AKAP2Q9Y2D5 859 aa32.07■■■□□ 2.72
SMC4-206ENST00000465903 CEP350Q5VT06 3117 aa32.06■■■□□ 2.72
SMC4-206ENST00000465903 TRAF5O00463 557 aa32.06■■■□□ 2.72
SMC4-206ENST00000465903 MFSD14BQ5SR56 506 aa32.06■■■□□ 2.72
SMC4-206ENST00000465903 SIRT2Q8IXJ6 389 aa32.06■■■□□ 2.72
SMC4-206ENST00000465903 RPAP2Q8IXW5 612 aaPredicted RBP32.06■■■□□ 2.72
SMC4-206ENST00000465903 HDAC9Q9UKV0 1011 aa32.06■■■□□ 2.72
SMC4-206ENST00000465903 CHAF1AQ13111 956 aaPredicted RBP32.05■■■□□ 2.72
SMC4-206ENST00000465903 CDC37L1Q7L3B6 337 aa32.05■■■□□ 2.72
SMC4-206ENST00000465903 ZBED3Q96IU2 234 aaPredicted RBP32.05■■■□□ 2.72
SMC4-206ENST00000465903 F8W031 263 aaPredicted RBP32.04■■■□□ 2.72
SMC4-206ENST00000465903 FRAT2O75474 233 aaPredicted RBP32.04■■■□□ 2.72
SMC4-206ENST00000465903 PHKA1P46020 1223 aa32.04■■■□□ 2.72
SMC4-206ENST00000465903 GRIK5Q16478 980 aa32.04■■■□□ 2.72
SMC4-206ENST00000465903 NBPF9Q3BBW0 867 aa32.04■■■□□ 2.72
SMC4-206ENST00000465903 DNAJC5GQ8N7S2 189 aa32.04■■■□□ 2.72
SMC4-206ENST00000465903 XAGE2Q96GT9 111 aa32.04■■■□□ 2.72
SMC4-206ENST00000465903 WNT10BO00744 389 aa32.03■■■□□ 2.72
SMC4-206ENST00000465903 USP48Q86UV5 1035 aa32.03■■■□□ 2.72
SMC4-206ENST00000465903 COL1A1P02452 1464 aaPredicted RBP32.03■■■□□ 2.72
SMC4-206ENST00000465903 ECM29Q5VYK3 1845 aa32.03■■■□□ 2.72
SMC4-206ENST00000465903 CCDC102BQ68D86 513 aa32.02■■■□□ 2.72
SMC4-206ENST00000465903 DLK2Q6UY11 383 aa32.02■■■□□ 2.72
SMC4-206ENST00000465903 DCPSQ96C86 337 aaKnown RBP32.02■■■□□ 2.72
SMC4-206ENST00000465903 GGA3Q9NZ52 723 aa32.02■■■□□ 2.72
SMC4-206ENST00000465903 ZBTB22O15209 634 aa32.01■■■□□ 2.71
SMC4-206ENST00000465903 ANGEL2Q5VTE6 544 aaKnown RBP32.01■■■□□ 2.71
SMC4-206ENST00000465903 NEUROD6Q96NK8 337 aa32.01■■■□□ 2.71
SMC4-206ENST00000465903 GPR108Q9NPR9 543 aa32.01■■■□□ 2.71
SMC4-206ENST00000465903 CREBZFQ9NS37 354 aa32.01■■■□□ 2.71
SMC4-206ENST00000465903 PCDHAC2Q9Y5I4 1007 aa32.01■■■□□ 2.71
SMC4-206ENST00000465903 OS9Q13438 667 aaPredicted RBP32■■■□□ 2.71
SMC4-206ENST00000465903 MTMR14Q8NCE2 650 aa32■■■□□ 2.71
SMC4-206ENST00000465903 TBC1D22AQ8WUA7 517 aa32■■■□□ 2.71
SMC4-206ENST00000465903 TMEM88BA6NKF7 163 aa31.99■■■□□ 2.71
SMC4-206ENST00000465903 CST9Q5W186 159 aa31.99■■■□□ 2.71
SMC4-206ENST00000465903 KRT26Q7Z3Y9 468 aa31.99■■■□□ 2.71
SMC4-206ENST00000465903 GNL3LQ9NVN8 582 aaKnown RBP31.99■■■□□ 2.71
SMC4-206ENST00000465903 TTF2Q9UNY4 1162 aaKnown RBP31.99■■■□□ 2.71
SMC4-206ENST00000465903 EXOC6BQ9Y2D4 811 aa31.98■■■□□ 2.71
SMC4-206ENST00000465903 ADM5C9JUS6 153 aa31.97■■■□□ 2.71
SMC4-206ENST00000465903 CFAP100Q494V2 611 aa31.97■■■□□ 2.71
SMC4-206ENST00000465903 TNNI3KQ59H18 835 aa31.97■■■□□ 2.71
SMC4-206ENST00000465903 FPGT-TNNI3KV9GXZ4 949 aa31.97■■■□□ 2.71
SMC4-206ENST00000465903 PITPNM2Q9BZ72 1349 aa31.97■■■□□ 2.71
SMC4-206ENST00000465903 SEMA3EO15041 775 aa31.96■■■□□ 2.71
SMC4-206ENST00000465903 DLGAP5Q15398 846 aa31.96■■■□□ 2.71
SMC4-206ENST00000465903 WDR66Q8TBY9 1149 aa31.96■■■□□ 2.71
SMC4-206ENST00000465903 PRMT6Q96LA8 375 aaPredicted RBP31.95■■■□□ 2.71
SMC4-206ENST00000465903 DENND2AQ9ULE3 1009 aa31.95■■■□□ 2.71
SMC4-206ENST00000465903 SCAF8Q9UPN6 1271 aaKnown RBP31.95■■■□□ 2.71
SMC4-206ENST00000465903 AOX1Q06278 1338 aa31.95■■■□□ 2.7
SMC4-206ENST00000465903 HMMRO75330 724 aa31.94■■■□□ 2.7
SMC4-206ENST00000465903 SULF1Q8IWU6 871 aa31.94■■■□□ 2.7
SMC4-206ENST00000465903 SPDYE2BA6NHP3 402 aa31.93■■■□□ 2.7
SMC4-206ENST00000465903 SPDYE6P0CI01 402 aa31.93■■■□□ 2.7
SMC4-206ENST00000465903 RASGRF1Q13972 1273 aa31.93■■■□□ 2.7
SMC4-206ENST00000465903 SERPINA10Q9UK55 444 aa31.93■■■□□ 2.7
SMC4-206ENST00000465903 SUGT1Q9Y2Z0 365 aa31.93■■■□□ 2.7
SMC4-206ENST00000465903 AKAP11Q9UKA4 1901 aa31.92■■■□□ 2.7
SMC4-206ENST00000465903 CELF2O95319 508 aaKnown RBP31.92■■■□□ 2.7
SMC4-206ENST00000465903 DBNDD2Q9BQY9 259 aa31.92■■■□□ 2.7
SMC4-206ENST00000465903 CRKP46108 304 aa31.91■■■□□ 2.7
SMC4-206ENST00000465903 EAF2Q96CJ1 260 aaPredicted RBP31.91■■■□□ 2.7
SMC4-206ENST00000465903 KLRG1Q96E93 195 aa31.91■■■□□ 2.7
SMC4-206ENST00000465903 SALL1Q9NSC2 1324 aa31.91■■■□□ 2.7
SMC4-206ENST00000465903 RBM5P52756 815 aaKnown RBP eCLIP31.9■■■□□ 2.7
SMC4-206ENST00000465903 HDLBPQ00341 1268 aaKnown RBP31.9■■■□□ 2.7
SMC4-206ENST00000465903 HSP90AB4PQ58FF6 505 aa31.9■■■□□ 2.7
SMC4-206ENST00000465903 ERC1Q8IUD2 1116 aa31.9■■■□□ 2.7
SMC4-206ENST00000465903 CRBNQ96SW2 442 aa31.9■■■□□ 2.7
SMC4-206ENST00000465903 MRIQ9BWK5 157 aa31.9■■■□□ 2.7
SMC4-206ENST00000465903 ARID4AP29374 1257 aaPredicted RBP31.89■■■□□ 2.7
SMC4-206ENST00000465903 GORABQ5T7V8 394 aa31.89■■■□□ 2.7
SMC4-206ENST00000465903 RHPN1Q8TCX5 695 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms