RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FOSBP53539 338 aa22.86■■□□□ 1.25
SDF4-205ENST00000465727 GPS2Q13227 327 aa22.86■■□□□ 1.25
SDF4-205ENST00000465727 HELLSQ9NRZ9 838 aa22.86■■□□□ 1.25
SDF4-205ENST00000465727 TBX22Q9Y458 520 aa22.86■■□□□ 1.25
SDF4-205ENST00000465727 PDIA3P30101 505 aaKnown RBP22.85■■□□□ 1.25
SDF4-205ENST00000465727 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
SDF4-205ENST00000465727 BRAPQ7Z569 592 aa22.85■■□□□ 1.25
SDF4-205ENST00000465727 KBTBD3Q8NAB2 608 aa22.85■■□□□ 1.25
SDF4-205ENST00000465727 SLC26A8Q96RN1 970 aa22.85■■□□□ 1.25
SDF4-205ENST00000465727 MPHOSPH8Q99549 860 aa22.85■■□□□ 1.25
SDF4-205ENST00000465727 NFAT5O94916 1531 aa22.85■■□□□ 1.25
SDF4-205ENST00000465727 CCT2P78371 535 aaKnown RBP22.85■■□□□ 1.25
SDF4-205ENST00000465727 C1orf141Q5JVX7 400 aa22.85■■□□□ 1.25
SDF4-205ENST00000465727 KLHDC4Q8TBB5 520 aa22.85■■□□□ 1.25
SDF4-205ENST00000465727 SEC62Q99442 399 aaKnown RBP22.85■■□□□ 1.25
SDF4-205ENST00000465727 GOLGA6L9A6NEM1 432 aa22.84■■□□□ 1.25
SDF4-205ENST00000465727 NEURL1BA8MQ27 555 aa22.84■■□□□ 1.25
SDF4-205ENST00000465727 SPTLC2O15270 562 aa22.84■■□□□ 1.25
SDF4-205ENST00000465727 EVCP57679 992 aa22.84■■□□□ 1.25
SDF4-205ENST00000465727 RGS22Q8NE09 1264 aa22.84■■□□□ 1.25
SDF4-205ENST00000465727 EID1Q9Y6B2 187 aa22.84■■□□□ 1.25
SDF4-205ENST00000465727 GCKRQ14397 625 aa22.83■■□□□ 1.25
SDF4-205ENST00000465727 RIC3Q7Z5B4 369 aa22.83■■□□□ 1.25
SDF4-205ENST00000465727 GPR161Q8N6U8 529 aaKnown RBP22.83■■□□□ 1.25
SDF4-205ENST00000465727 PARP3Q9Y6F1 533 aa22.83■■□□□ 1.25
SDF4-205ENST00000465727 URI1O94763 535 aaPredicted RBP22.83■■□□□ 1.24
SDF4-205ENST00000465727 ZNF202O95125 648 aa22.83■■□□□ 1.24
SDF4-205ENST00000465727 CAPN2P17655 700 aa22.83■■□□□ 1.24
SDF4-205ENST00000465727 GORABQ5T7V8 394 aa22.83■■□□□ 1.24
SDF4-205ENST00000465727 CMA1P23946 247 aa22.82■■□□□ 1.24
SDF4-205ENST00000465727 GUCY1B3Q02153 619 aa22.82■■□□□ 1.24
SDF4-205ENST00000465727 SYTL4Q96C24 671 aaPredicted RBP22.82■■□□□ 1.24
SDF4-205ENST00000465727 NCOA5Q9HCD5 579 aaKnown RBP22.82■■□□□ 1.24
SDF4-205ENST00000465727 RGPD2P0DJD1 1756 aa22.82■■□□□ 1.24
SDF4-205ENST00000465727 TFCP2Q12800 502 aa22.81■■□□□ 1.24
SDF4-205ENST00000465727 REXO1L1PQ8IX06 675 aa22.81■■□□□ 1.24
SDF4-205ENST00000465727 E7EWF7 191 aa22.81■■□□□ 1.24
SDF4-205ENST00000465727 ARHGAP6O43182 974 aa22.81■■□□□ 1.24
SDF4-205ENST00000465727 FDPSP14324 419 aaKnown RBP22.81■■□□□ 1.24
SDF4-205ENST00000465727 RFX5P48382 616 aaPredicted RBP22.81■■□□□ 1.24
SDF4-205ENST00000465727 PTPN12Q05209 780 aaKnown RBP22.81■■□□□ 1.24
SDF4-205ENST00000465727 FMNL2Q96PY5 1086 aa22.81■■□□□ 1.24
SDF4-205ENST00000465727 CARD6Q9BX69 1037 aa22.81■■□□□ 1.24
SDF4-205ENST00000465727 CLIC4Q9Y696 253 aa22.81■■□□□ 1.24
SDF4-205ENST00000465727 DHX16O60231 1041 aaKnown RBP22.8■■□□□ 1.24
SDF4-205ENST00000465727 LMOD1P29536 600 aaPredicted RBP22.8■■□□□ 1.24
SDF4-205ENST00000465727 UBASH3AP57075 661 aa22.8■■□□□ 1.24
SDF4-205ENST00000465727 PDIA6Q15084 440 aa22.8■■□□□ 1.24
SDF4-205ENST00000465727 CC2D1AQ6P1N0 951 aaPredicted RBP22.8■■□□□ 1.24
SDF4-205ENST00000465727 TUBE1Q9UJT0 475 aa22.8■■□□□ 1.24
SDF4-205ENST00000465727 STRCQ7RTU9 1775 aa22.8■■□□□ 1.24
SDF4-205ENST00000465727 ZNF142P52746 1687 aaPredicted RBP22.8■■□□□ 1.24
SDF4-205ENST00000465727 TBC1D8O95759 1140 aa22.8■■□□□ 1.24
SDF4-205ENST00000465727 MYL5Q02045 173 aa22.8■■□□□ 1.24
SDF4-205ENST00000465727 RAD51AP2Q09MP3 1159 aa22.8■■□□□ 1.24
SDF4-205ENST00000465727 AIMP1Q12904 312 aaKnown RBP22.8■■□□□ 1.24
SDF4-205ENST00000465727 MYSM1Q5VVJ2 828 aa22.8■■□□□ 1.24
SDF4-205ENST00000465727 HSD3B7Q9H2F3 369 aa22.8■■□□□ 1.24
SDF4-205ENST00000465727 ADAMTS7Q9UKP4 1686 aa22.79■■□□□ 1.24
SDF4-205ENST00000465727 EPHA10Q5JZY3 1008 aa22.79■■□□□ 1.24
SDF4-205ENST00000465727 DDX46Q7L014 1031 aaKnown RBP22.79■■□□□ 1.24
SDF4-205ENST00000465727 VSTM4Q8IW00 320 aa22.79■■□□□ 1.24
SDF4-205ENST00000465727 C8orf76Q96K31 380 aa22.79■■□□□ 1.24
SDF4-205ENST00000465727 PXDNQ92626 1479 aa22.79■■□□□ 1.24
SDF4-205ENST00000465727 BIN1O00499 593 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 RABL6Q3YEC7 729 aaPredicted RBP22.78■■□□□ 1.24
SDF4-205ENST00000465727 JAKMIP3Q5VZ66 844 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 SYNE3Q6ZMZ3 975 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 FBXO18Q8NFZ0 1043 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 DBNDD2Q9BQY9 259 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 METTL22Q9BUU2 404 aaPredicted RBP22.78■■□□□ 1.24
SDF4-205ENST00000465727 NAP1L2Q9ULW6 460 aaPredicted RBP22.78■■□□□ 1.24
SDF4-205ENST00000465727 PRAMEF22A3QJZ6 481 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 POLR3GO15318 223 aaPredicted RBP22.78■■□□□ 1.24
SDF4-205ENST00000465727 SERPINC1P01008 464 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 PFKFB1P16118 471 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 MAP3K9P80192 1104 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 UTP14AQ9BVJ6 771 aaKnown RBP22.78■■□□□ 1.24
SDF4-205ENST00000465727 ARFGAP3Q9NP61 516 aa22.78■■□□□ 1.24
SDF4-205ENST00000465727 TOP1P11387 765 aaKnown RBP22.77■■□□□ 1.24
SDF4-205ENST00000465727 OAS2P29728 719 aaKnown RBP22.77■■□□□ 1.24
SDF4-205ENST00000465727 SMC1AQ14683 1233 aaKnown RBP22.77■■□□□ 1.24
SDF4-205ENST00000465727 AXDND1Q5T1B0 1012 aaPredicted RBP22.77■■□□□ 1.24
SDF4-205ENST00000465727 PSD3Q9NYI0 1048 aa22.77■■□□□ 1.24
SDF4-205ENST00000465727 ARHGAP23Q9P227 1491 aa22.77■■□□□ 1.24
SDF4-205ENST00000465727 SPEF2Q9C093 1822 aa22.77■■□□□ 1.24
SDF4-205ENST00000465727 ATP1A3P13637 1013 aa22.77■■□□□ 1.23
SDF4-205ENST00000465727 CFAP100Q494V2 611 aa22.77■■□□□ 1.23
SDF4-205ENST00000465727 ZMYM1Q5SVZ6 1142 aa22.77■■□□□ 1.23
SDF4-205ENST00000465727 ANO1Q5XXA6 986 aa22.77■■□□□ 1.23
SDF4-205ENST00000465727 KCNH5Q8NCM2 988 aa22.77■■□□□ 1.23
SDF4-205ENST00000465727 RABGGTAQ92696 567 aa22.77■■□□□ 1.23
SDF4-205ENST00000465727 FEZ2Q9UHY8 353 aaPredicted RBP22.77■■□□□ 1.23
SDF4-205ENST00000465727 PPP2R2CQ9Y2T4 447 aa22.77■■□□□ 1.23
SDF4-205ENST00000465727 NDUFB9Q9Y6M9 179 aa22.77■■□□□ 1.23
SDF4-205ENST00000465727 VWA3AA6NCI4 1184 aa22.76■■□□□ 1.23
SDF4-205ENST00000465727 FANCGO15287 622 aa22.76■■□□□ 1.23
SDF4-205ENST00000465727 SEC31AO94979 1220 aaKnown RBP22.76■■□□□ 1.23
SDF4-205ENST00000465727 CHGBP05060 677 aa22.76■■□□□ 1.23
SDF4-205ENST00000465727 HSPD1P10809 573 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms