RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 FLIIQ13045 1269 aa13.2□□□□□ -0.3
GPNMB-206ENST00000465673 CFAP100Q494V2 611 aa13.2□□□□□ -0.3
GPNMB-206ENST00000465673 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
GPNMB-206ENST00000465673 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
GPNMB-206ENST00000465673 OTOP1Q7RTM1 612 aa13.19□□□□□ -0.3
GPNMB-206ENST00000465673 WWC1Q8IX03 1113 aa13.19□□□□□ -0.3
GPNMB-206ENST00000465673 VEZTQ9HBM0 779 aa13.19□□□□□ -0.3
GPNMB-206ENST00000465673 ANKRD18BA2A2Z9 1011 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 MANSC4A6NHS7 340 aaPredicted RBP13.18□□□□□ -0.3
GPNMB-206ENST00000465673 F6X3S4 739 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 PLIN1O60240 522 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 FOXO4P98177 505 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 FKBP5Q13451 457 aaPredicted RBP13.18□□□□□ -0.3
GPNMB-206ENST00000465673 MAP3K11Q16584 847 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 DNAAF4Q8WXU2 420 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 ZNF594Q96JF6 807 aaPredicted RBP13.18□□□□□ -0.3
GPNMB-206ENST00000465673 CHMP4AQ9BY43 222 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 CHMP3Q9Y3E7 222 aa13.18□□□□□ -0.3
GPNMB-206ENST00000465673 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 PPP1R12BO60237 982 aaPredicted RBP13.17□□□□□ -0.3
GPNMB-206ENST00000465673 USP2O75604 605 aaPredicted RBP13.17□□□□□ -0.3
GPNMB-206ENST00000465673 ALDH1A1P00352 501 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 MMP14P50281 582 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 CRHR2Q13324 411 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 MTMR14Q8NCE2 650 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 PTPN18Q99952 460 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 HTTP42858 3142 aa13.17□□□□□ -0.3
GPNMB-206ENST00000465673 ZBTB48P10074 688 aaPredicted RBP13.16□□□□□ -0.3
GPNMB-206ENST00000465673 IL1R1P14778 569 aa13.16□□□□□ -0.3
GPNMB-206ENST00000465673 RBM5P52756 815 aaKnown RBP eCLIP13.16□□□□□ -0.3
GPNMB-206ENST00000465673 INHBEP58166 350 aa13.16□□□□□ -0.3
GPNMB-206ENST00000465673 RASA3Q14644 834 aa13.16□□□□□ -0.3
GPNMB-206ENST00000465673 CNKSR2Q8WXI2 1034 aa13.16□□□□□ -0.3
GPNMB-206ENST00000465673 MYH16Q9H6N6 1097 aa13.16□□□□□ -0.3
GPNMB-206ENST00000465673 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
GPNMB-206ENST00000465673 EN2P19622 333 aaPredicted RBP13.15□□□□□ -0.3
GPNMB-206ENST00000465673 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
GPNMB-206ENST00000465673 SUPT20HL1Q3ZLR7 823 aa13.15□□□□□ -0.3
GPNMB-206ENST00000465673 LMBR1LQ6UX01 489 aa13.15□□□□□ -0.3
GPNMB-206ENST00000465673 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
GPNMB-206ENST00000465673 ELP3Q9H9T3 547 aa13.15□□□□□ -0.3
GPNMB-206ENST00000465673 PTPN22Q9Y2R2 807 aa13.15□□□□□ -0.3
GPNMB-206ENST00000465673 COL1A1P02452 1464 aaPredicted RBP13.15□□□□□ -0.3
GPNMB-206ENST00000465673 MKI67P46013 3256 aaKnown RBP13.15□□□□□ -0.3
GPNMB-206ENST00000465673 MYO1BO43795 1136 aa13.14□□□□□ -0.31
GPNMB-206ENST00000465673 VAMP4O75379 141 aa13.14□□□□□ -0.31
GPNMB-206ENST00000465673 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
GPNMB-206ENST00000465673 TDRD3Q9H7E2 651 aaKnown RBP13.14□□□□□ -0.31
GPNMB-206ENST00000465673 PPP2R3BQ9Y5P8 575 aa13.14□□□□□ -0.31
GPNMB-206ENST00000465673 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 KIAA0100Q14667 2235 aaKnown RBP13.13□□□□□ -0.31
GPNMB-206ENST00000465673 GYG1P46976 350 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
GPNMB-206ENST00000465673 EXOSC9Q06265 439 aaKnown RBP13.13□□□□□ -0.31
GPNMB-206ENST00000465673 GRIK5Q16478 980 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 LDHAL6AQ6ZMR3 332 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 ERO1AQ96HE7 468 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 EFCC1Q9HA90 598 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 ZNF70Q9UC06 446 aaPredicted RBP13.13□□□□□ -0.31
GPNMB-206ENST00000465673 CENPFP49454 3210 aa13.13□□□□□ -0.31
GPNMB-206ENST00000465673 A0A1B0GUL6 1792 aa13.12□□□□□ -0.31
GPNMB-206ENST00000465673 TCP10L2B9ZVM9 353 aa13.12□□□□□ -0.31
GPNMB-206ENST00000465673 MYCP01106 439 aaPredicted RBP13.12□□□□□ -0.31
GPNMB-206ENST00000465673 FKBP1AP62942 108 aaKnown RBP13.12□□□□□ -0.31
GPNMB-206ENST00000465673 SP3Q02447 781 aa13.12□□□□□ -0.31
GPNMB-206ENST00000465673 HABP4Q5JVS0 413 aaKnown RBP13.12□□□□□ -0.31
GPNMB-206ENST00000465673 MFSD14BQ5SR56 506 aa13.12□□□□□ -0.31
GPNMB-206ENST00000465673 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.12□□□□□ -0.31
GPNMB-206ENST00000465673 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
GPNMB-206ENST00000465673 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
GPNMB-206ENST00000465673 TEPSINQ96N21 525 aa13.12□□□□□ -0.31
GPNMB-206ENST00000465673 PUS3Q9BZE2 481 aaKnown RBP13.12□□□□□ -0.31
GPNMB-206ENST00000465673 CNNM1Q9NRU3 951 aa13.12□□□□□ -0.31
GPNMB-206ENST00000465673 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
GPNMB-206ENST00000465673 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
GPNMB-206ENST00000465673 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
GPNMB-206ENST00000465673 CCDC57Q2TAC2 916 aa13.11□□□□□ -0.31
GPNMB-206ENST00000465673 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
GPNMB-206ENST00000465673 TAF7LQ5H9L4 462 aa13.11□□□□□ -0.31
GPNMB-206ENST00000465673 INTS3Q68E01 1043 aaKnown RBP13.11□□□□□ -0.31
GPNMB-206ENST00000465673 TDRD7Q8NHU6 1098 aaKnown RBP13.11□□□□□ -0.31
GPNMB-206ENST00000465673 BRI3BPQ8WY22 251 aa13.11□□□□□ -0.31
GPNMB-206ENST00000465673 ARMC5Q96C12 935 aa13.11□□□□□ -0.31
GPNMB-206ENST00000465673 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
GPNMB-206ENST00000465673 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
GPNMB-206ENST00000465673 IQSEC3Q9UPP2 1182 aaPredicted RBP13.11□□□□□ -0.31
GPNMB-206ENST00000465673 IL16Q14005 1332 aa13.11□□□□□ -0.31
GPNMB-206ENST00000465673 FAM205AQ6ZU69 1335 aa13.11□□□□□ -0.31
GPNMB-206ENST00000465673 GRM8O00222 908 aa13.1□□□□□ -0.31
GPNMB-206ENST00000465673 CACNB3P54284 484 aa13.1□□□□□ -0.31
GPNMB-206ENST00000465673 OTUD7BQ6GQQ9 843 aa13.1□□□□□ -0.31
GPNMB-206ENST00000465673 DZIP1LQ8IYY4 767 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms