RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	HOXB3	P14651	431 aa	Predicted RBP	10.84	□□□□□ -0.67
UBA3-208	ENST00000465627	MX1	P20591	662 aa		10.84	□□□□□ -0.67
UBA3-208	ENST00000465627	IL15	P40933	162 aa	Predicted RBP	10.84	□□□□□ -0.67
UBA3-208	ENST00000465627	IFIT5	Q13325	482 aa	Known RBP	10.84	□□□□□ -0.67
UBA3-208	ENST00000465627	DOK7	Q18PE1	504 aa		10.84	□□□□□ -0.67
UBA3-208	ENST00000465627	CCDC57	Q2TAC2	916 aa		10.84	□□□□□ -0.67
UBA3-208	ENST00000465627	SIL1	Q9H173	461 aa		10.84	□□□□□ -0.67
UBA3-208	ENST00000465627	MKI67	P46013	3256 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-208	ENST00000465627	KLRG2	A4D1S0	409 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-208	ENST00000465627	FAM177B	A6PVY3	158 aa		10.83	□□□□□ -0.68
UBA3-208	ENST00000465627	RIOK3	O14730	519 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-208	ENST00000465627	TFCP2	Q12800	502 aa		10.83	□□□□□ -0.68
UBA3-208	ENST00000465627	TPTE2	Q6XPS3	522 aa		10.83	□□□□□ -0.68
UBA3-208	ENST00000465627	BICDL1	Q6ZP65	573 aa		10.83	□□□□□ -0.68
UBA3-208	ENST00000465627	TTC41P	Q6P2S7	1318 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	ANKRD18B	A2A2Z9	1011 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	MMP10	P09238	476 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	CRY2	Q49AN0	593 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	CCDC152	Q4G0S7	254 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	TNNI3K	Q59H18	835 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	PRR5L	Q6MZQ0	368 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	CLASRP	Q8N2M8	674 aa	Known RBP	10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	SEC31B	Q9NQW1	1179 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	TLR7	Q9NYK1	1049 aa	Known RBP	10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	DBNL	Q9UJU6	430 aa	Known RBP	10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	CHMP3	Q9Y3E7	222 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	FPGT-TNNI3K	V9GXZ4	949 aa		10.82	□□□□□ -0.68
UBA3-208	ENST00000465627	SERPINB2	P05120	415 aa		10.81	□□□□□ -0.68
UBA3-208	ENST00000465627	OS9	Q13438	667 aa	Predicted RBP	10.81	□□□□□ -0.68
UBA3-208	ENST00000465627	TSHZ3	Q63HK5	1081 aa		10.81	□□□□□ -0.68
UBA3-208	ENST00000465627	NLGN1	Q8N2Q7	840 aa		10.81	□□□□□ -0.68
UBA3-208	ENST00000465627	BEGAIN	Q9BUH8	593 aa		10.81	□□□□□ -0.68
UBA3-208	ENST00000465627	POTEB3	A0JP26	581 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	RIMBP2	O15034	1052 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	SDS	P20132	328 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	FGFR2	P21802	821 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	POTEB	Q6S5H4	581 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	AACS	Q86V21	672 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	KRTAP3-3	Q9BYR6	98 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	KRTAP3-2	Q9BYR7	98 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	LRRC37A	A6NMS7	1700 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	COL11A2	P13942	1736 aa	Predicted RBP	10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	AK9	Q5TCS8	1911 aa		10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.8	□□□□□ -0.68
UBA3-208	ENST00000465627	ITGBL1	O95965	494 aa	Predicted RBP	10.79	□□□□□ -0.68
UBA3-208	ENST00000465627	HOXB1	P14653	301 aa	Predicted RBP	10.79	□□□□□ -0.68
UBA3-208	ENST00000465627	GRM1	Q13255	1194 aa		10.79	□□□□□ -0.68
UBA3-208	ENST00000465627	LDHAL6A	Q6ZMR3	332 aa		10.79	□□□□□ -0.68
UBA3-208	ENST00000465627	CNBD1	Q8NA66	436 aa		10.79	□□□□□ -0.68
UBA3-208	ENST00000465627	ECHDC1	Q9NTX5	307 aa		10.79	□□□□□ -0.68
UBA3-208	ENST00000465627	AKAP11	Q9UKA4	1901 aa		10.79	□□□□□ -0.68
UBA3-208	ENST00000465627	PDE8B	O95263	885 aa		10.78	□□□□□ -0.68
UBA3-208	ENST00000465627	ATP5J	P18859	108 aa		10.78	□□□□□ -0.68
UBA3-208	ENST00000465627	HOXA10	P31260	410 aa	Predicted RBP	10.78	□□□□□ -0.68
UBA3-208	ENST00000465627	CCDC24	Q8N4L8	307 aa		10.78	□□□□□ -0.68
UBA3-208	ENST00000465627	CELF1	Q92879	486 aa	Known RBP	10.78	□□□□□ -0.68
UBA3-208	ENST00000465627	NLRP3	Q96P20	1036 aa		10.78	□□□□□ -0.68
UBA3-208	ENST00000465627	DBNDD2	Q9BQY9	259 aa		10.78	□□□□□ -0.68
UBA3-208	ENST00000465627	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.78	□□□□□ -0.68
UBA3-208	ENST00000465627	MROH5	Q6ZUA9	1318 aa		10.78	□□□□□ -0.68
UBA3-208	ENST00000465627		A0A1B0GUL7	405 aa		10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	GLRX3	O76003	335 aa	Known RBP	10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	IFIT2	P09913	472 aa	Known RBP	10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	TIMM10	P62072	90 aa		10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	DALRD3	Q5D0E6	543 aa	Known RBP	10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	TBC1D9	Q6ZT07	1266 aa		10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	MICALL2	Q8IY33	904 aa		10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	CAPNS2	Q96L46	248 aa		10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	BSDC1	Q9NW68	430 aa	Predicted RBP	10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	PIM2	Q9P1W9	311 aa		10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	CEP126	Q9P2H0	1117 aa		10.77	□□□□□ -0.68
UBA3-208	ENST00000465627	IRS2	Q9Y4H2	1338 aa		10.77	□□□□□ -0.69
UBA3-208	ENST00000465627	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.77	□□□□□ -0.69
UBA3-208	ENST00000465627	AOC2	O75106	756 aa		10.77	□□□□□ -0.69
UBA3-208	ENST00000465627	CYP4F22	Q6NT55	531 aa		10.77	□□□□□ -0.69
UBA3-208	ENST00000465627	RNF25	Q96BH1	459 aa	Predicted RBP	10.77	□□□□□ -0.69
UBA3-208	ENST00000465627	ZFP91	Q96JP5	570 aa	Predicted RBP	10.77	□□□□□ -0.69
UBA3-208	ENST00000465627	CDC5L	Q99459	802 aa	Known RBP	10.77	□□□□□ -0.69
UBA3-208	ENST00000465627	RBM19	Q9Y4C8	960 aa	Known RBP	10.77	□□□□□ -0.69
UBA3-208	ENST00000465627	CEP290	O15078	2479 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	CDC45	O75419	566 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	LMNB1	P20700	586 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	GTF2E1	P29083	439 aa	Predicted RBP	10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	ADORA1	P30542	326 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	RPS8	P62241	208 aa	Known RBP	10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	TAF7L	Q5H9L4	462 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	METTL24	Q5JXM2	366 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	GPR101	Q96P66	508 aa	Predicted RBP	10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	BRIP1	Q9BX63	1249 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	CNNM1	Q9NRU3	951 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	ABT1	Q9ULW3	272 aa	Known RBP	10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	MINPP1	Q9UNW1	487 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	AKAP2	Q9Y2D5	859 aa		10.76	□□□□□ -0.69
UBA3-208	ENST00000465627	DICER1	Q9UPY3	1922 aa	Known RBP	10.75	□□□□□ -0.69
UBA3-208	ENST00000465627	UNC80	Q8N2C7	3258 aa		10.75	□□□□□ -0.69
UBA3-208	ENST00000465627	DLEC1	Q9Y238	1755 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms