RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 VIL1P09327 827 aaKnown RBP22.71■■□□□ 1.23
SCAMP3-204ENST00000465312 VEGFAP15692 232 aaPredicted RBP22.71■■□□□ 1.23
SCAMP3-204ENST00000465312 HDAC1Q13547 482 aaPredicted RBP22.71■■□□□ 1.23
SCAMP3-204ENST00000465312 EAF2Q96CJ1 260 aaPredicted RBP22.71■■□□□ 1.23
SCAMP3-204ENST00000465312 WDR90Q96KV7 1748 aa22.71■■□□□ 1.23
SCAMP3-204ENST00000465312 PSME4Q14997 1843 aa22.71■■□□□ 1.23
SCAMP3-204ENST00000465312 RPS12P25398 132 aaKnown RBP22.7■■□□□ 1.22
SCAMP3-204ENST00000465312 EAPPQ56P03 285 aaPredicted RBP22.7■■□□□ 1.22
SCAMP3-204ENST00000465312 TLR7Q9NYK1 1049 aaKnown RBP22.7■■□□□ 1.22
SCAMP3-204ENST00000465312 MYO3BQ8WXR4 1341 aa22.7■■□□□ 1.22
SCAMP3-204ENST00000465312 F8W031 263 aaPredicted RBP22.69■■□□□ 1.22
SCAMP3-204ENST00000465312 H7C1D1 291 aa22.69■■□□□ 1.22
SCAMP3-204ENST00000465312 DACT2Q5SW24 774 aa22.69■■□□□ 1.22
SCAMP3-204ENST00000465312 MICALL2Q8IY33 904 aa22.69■■□□□ 1.22
SCAMP3-204ENST00000465312 GCC1Q96CN9 775 aa22.69■■□□□ 1.22
SCAMP3-204ENST00000465312 L3MBTL3Q96JM7 780 aaPredicted RBP22.69■■□□□ 1.22
SCAMP3-204ENST00000465312 CNOT7Q9UIV1 285 aaKnown RBP22.69■■□□□ 1.22
SCAMP3-204ENST00000465312 DENND2AQ9ULE3 1009 aa22.69■■□□□ 1.22
SCAMP3-204ENST00000465312 UQCRFS1P1P0C7P4 283 aa22.68■■□□□ 1.22
SCAMP3-204ENST00000465312 SCNN1DP51172 638 aa22.68■■□□□ 1.22
SCAMP3-204ENST00000465312 MFSD14BQ5SR56 506 aa22.68■■□□□ 1.22
SCAMP3-204ENST00000465312 ANKRD45Q5TZF3 282 aa22.68■■□□□ 1.22
SCAMP3-204ENST00000465312 KIAA0825Q8IV33 1275 aa22.68■■□□□ 1.22
SCAMP3-204ENST00000465312 AGBL3Q8NEM8 1001 aa22.68■■□□□ 1.22
SCAMP3-204ENST00000465312 GPRC5DQ9NZD1 345 aa22.68■■□□□ 1.22
SCAMP3-204ENST00000465312 DBNLQ9UJU6 430 aaKnown RBP22.68■■□□□ 1.22
SCAMP3-204ENST00000465312 EPHX2P34913 555 aa22.67■■□□□ 1.22
SCAMP3-204ENST00000465312 EPS15P42566 896 aa22.67■■□□□ 1.22
SCAMP3-204ENST00000465312 B4GALNT3Q6L9W6 998 aa22.67■■□□□ 1.22
SCAMP3-204ENST00000465312 OGFOD1Q8N543 542 aa22.67■■□□□ 1.22
SCAMP3-204ENST00000465312 HDAC9Q9UKV0 1011 aa22.67■■□□□ 1.22
SCAMP3-204ENST00000465312 SCN4AP35499 1836 aa22.66■■□□□ 1.22
SCAMP3-204ENST00000465312 FAM205AQ6ZU69 1335 aa22.66■■□□□ 1.22
SCAMP3-204ENST00000465312 SEMA3EO15041 775 aa22.66■■□□□ 1.22
SCAMP3-204ENST00000465312 RBM26Q5T8P6 1007 aaKnown RBP22.66■■□□□ 1.22
SCAMP3-204ENST00000465312 TBC1D22AQ8WUA7 517 aa22.66■■□□□ 1.22
SCAMP3-204ENST00000465312 DPF2Q92785 391 aa22.66■■□□□ 1.22
SCAMP3-204ENST00000465312 CLEC11AQ9Y240 323 aa22.66■■□□□ 1.22
SCAMP3-204ENST00000465312 SHTN1A0MZ66 631 aa22.65■■□□□ 1.22
SCAMP3-204ENST00000465312 IGHDP01880 384 aa22.65■■□□□ 1.22
SCAMP3-204ENST00000465312 USP17L8P0C7I0 530 aa22.65■■□□□ 1.22
SCAMP3-204ENST00000465312 RASGRF1Q13972 1273 aa22.65■■□□□ 1.22
SCAMP3-204ENST00000465312 WDR66Q8TBY9 1149 aa22.65■■□□□ 1.22
SCAMP3-204ENST00000465312 TAF1DQ9H5J8 278 aaPredicted RBP22.65■■□□□ 1.22
SCAMP3-204ENST00000465312 TBC1D10BQ4KMP7 808 aaPredicted RBP22.64■■□□□ 1.21
SCAMP3-204ENST00000465312 GPATCH3Q96I76 525 aa22.64■■□□□ 1.21
SCAMP3-204ENST00000465312 SNRKQ9NRH2 765 aa22.64■■□□□ 1.21
SCAMP3-204ENST00000465312 ADARB2Q9NS39 739 aaKnown RBP22.64■■□□□ 1.21
SCAMP3-204ENST00000465312 COL1A1P02452 1464 aaPredicted RBP22.63■■□□□ 1.21
SCAMP3-204ENST00000465312 POTECB2RU33 542 aa22.63■■□□□ 1.21
SCAMP3-204ENST00000465312 ARID4AP29374 1257 aaPredicted RBP22.63■■□□□ 1.21
SCAMP3-204ENST00000465312 RBM5P52756 815 aaKnown RBP eCLIP22.63■■□□□ 1.21
SCAMP3-204ENST00000465312 CERS5Q8N5B7 392 aa22.63■■□□□ 1.21
SCAMP3-204ENST00000465312 SPATA5Q8NB90 893 aa22.63■■□□□ 1.21
SCAMP3-204ENST00000465312 ABCF2Q9UG63 623 aa22.63■■□□□ 1.21
SCAMP3-204ENST00000465312 ZNF646O15015 1829 aaPredicted RBP22.62■■□□□ 1.21
SCAMP3-204ENST00000465312 FKBP1AP62942 108 aaKnown RBP22.62■■□□□ 1.21
SCAMP3-204ENST00000465312 PI16Q6UXB8 463 aa22.62■■□□□ 1.21
SCAMP3-204ENST00000465312 SAMD7Q7Z3H4 446 aa22.62■■□□□ 1.21
SCAMP3-204ENST00000465312 PNMA8AQ86V59 439 aaPredicted RBP22.62■■□□□ 1.21
SCAMP3-204ENST00000465312 HMG20BQ9P0W2 317 aa22.62■■□□□ 1.21
SCAMP3-204ENST00000465312 TTF2Q9UNY4 1162 aaKnown RBP22.62■■□□□ 1.21
SCAMP3-204ENST00000465312 MCAMP43121 646 aa22.61■■□□□ 1.21
SCAMP3-204ENST00000465312 SCARF1Q14162 830 aa22.61■■□□□ 1.21
SCAMP3-204ENST00000465312 KIF4BQ2VIQ3 1234 aa22.61■■□□□ 1.21
SCAMP3-204ENST00000465312 ZGPATQ8N5A5 531 aaKnown RBP22.61■■□□□ 1.21
SCAMP3-204ENST00000465312 KIF3CO14782 793 aa22.6■■□□□ 1.21
SCAMP3-204ENST00000465312 GMLQ99445 158 aa22.6■■□□□ 1.21
SCAMP3-204ENST00000465312 DNAJC2Q99543 621 aaKnown RBP22.6■■□□□ 1.21
SCAMP3-204ENST00000465312 MYOZ2Q9NPC6 264 aa22.6■■□□□ 1.21
SCAMP3-204ENST00000465312 LDHBP07195 334 aaKnown RBP22.59■■□□□ 1.21
SCAMP3-204ENST00000465312 USP50Q70EL3 339 aaPredicted RBP22.59■■□□□ 1.21
SCAMP3-204ENST00000465312 TRPM4Q8TD43 1214 aa22.59■■□□□ 1.21
SCAMP3-204ENST00000465312 LNPKQ9C0E8 428 aa22.59■■□□□ 1.21
SCAMP3-204ENST00000465312 MAST3O60307 1309 aa22.58■■□□□ 1.21
SCAMP3-204ENST00000465312 SPTY2D1Q68D10 685 aaPredicted RBP22.58■■□□□ 1.21
SCAMP3-204ENST00000465312 DZIP1Q86YF9 867 aaKnown RBP22.58■■□□□ 1.21
SCAMP3-204ENST00000465312 SMC5Q8IY18 1101 aa22.58■■□□□ 1.21
SCAMP3-204ENST00000465312 CCDC136Q96JN2 1154 aa22.58■■□□□ 1.21
SCAMP3-204ENST00000465312 LRP2BPQ9P2M1 347 aa22.58■■□□□ 1.21
SCAMP3-204ENST00000465312 PRDX5P30044 214 aa22.57■■□□□ 1.2
SCAMP3-204ENST00000465312 ZAP70P43403 619 aa22.57■■□□□ 1.2
SCAMP3-204ENST00000465312 DLGAP5Q15398 846 aa22.57■■□□□ 1.2
SCAMP3-204ENST00000465312 ERICH6Q7L0X2 663 aa22.57■■□□□ 1.2
SCAMP3-204ENST00000465312 ZNF512BQ96KM6 892 aaPredicted RBP22.57■■□□□ 1.2
SCAMP3-204ENST00000465312 RAI14Q9P0K7 980 aa22.57■■□□□ 1.2
SCAMP3-204ENST00000465312 NDUFB9Q9Y6M9 179 aa22.57■■□□□ 1.2
SCAMP3-204ENST00000465312 PDS5AQ29RF7 1337 aaKnown RBP22.57■■□□□ 1.2
SCAMP3-204ENST00000465312 POTEIP0CG38 1075 aa22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 POTEJP0CG39 1038 aa22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 ZNF280AP59817 542 aaPredicted RBP22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 GRIK5Q16478 980 aa22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 TSHZ3Q63HK5 1081 aa22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 TBC1D9Q6ZT07 1266 aa22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 LDHDQ86WU2 507 aa22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 BOLA2Q9H3K6 86 aa22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 ECHDC1Q9NTX5 307 aa22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 SALL1Q9NSC2 1324 aa22.56■■□□□ 1.2
SCAMP3-204ENST00000465312 EGFRP00533 1210 aa22.55■■□□□ 1.2
SCAMP3-204ENST00000465312 CFAP100Q494V2 611 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms