RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 SUGCTQ9HAC7 445 aa9.04□□□□□ -0.96
UBR4-209ENST00000465036 PPP1R15AO75807 674 aaPredicted RBP9.03□□□□□ -0.96
UBR4-209ENST00000465036 IRAK1P51617 712 aa9.03□□□□□ -0.96
UBR4-209ENST00000465036 GP2P55259 537 aaKnown RBP9.03□□□□□ -0.96
UBR4-209ENST00000465036 FDX2Q6P4F2 183 aa9.03□□□□□ -0.96
UBR4-209ENST00000465036 HHIPQ96QV1 700 aa9.03□□□□□ -0.96
UBR4-209ENST00000465036 OSMRQ99650 979 aa9.03□□□□□ -0.96
UBR4-209ENST00000465036 GOLGA2P5Q9HBQ8 144 aa9.03□□□□□ -0.96
UBR4-209ENST00000465036 TMEM88BA6NKF7 163 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 PAX4O43316 350 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 TNFRSF21O75509 655 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 NLRP12P59046 1061 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 VN1R5Q7Z5H4 357 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 KRTAP19-1Q8IUB9 90 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 SMG8Q8ND04 991 aaKnown RBP9.02□□□□□ -0.97
UBR4-209ENST00000465036 SNX29Q8TEQ0 813 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 SLC7A3Q8WY07 619 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 FMNL2Q96PY5 1086 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 ZKSCAN3Q9BRR0 538 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 TMPRSS13Q9BYE2 586 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 BHLHE41Q9C0J9 482 aaPredicted RBP9.02□□□□□ -0.97
UBR4-209ENST00000465036 POLIQ9UNA4 740 aa9.02□□□□□ -0.97
UBR4-209ENST00000465036 OAS3Q9Y6K5 1087 aaKnown RBP9.02□□□□□ -0.97
UBR4-209ENST00000465036 A6NHS1 94 aa9.01□□□□□ -0.97
UBR4-209ENST00000465036 SOX1O00570 391 aaPredicted RBP9.01□□□□□ -0.97
UBR4-209ENST00000465036 FAM13AO94988 1023 aa9.01□□□□□ -0.97
UBR4-209ENST00000465036 IKBKEQ14164 716 aa9.01□□□□□ -0.97
UBR4-209ENST00000465036 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
UBR4-209ENST00000465036 EREGO14944 169 aa9□□□□□ -0.97
UBR4-209ENST00000465036 PHACTR2O75167 634 aa9□□□□□ -0.97
UBR4-209ENST00000465036 TRPA1O75762 1119 aa9□□□□□ -0.97
UBR4-209ENST00000465036 CPSF6Q16630 551 aaKnown RBP eCLIP9□□□□□ -0.97
UBR4-209ENST00000465036 KCNF1Q9H3M0 494 aa9□□□□□ -0.97
UBR4-209ENST00000465036 TIAF1O95411 115 aa8.99□□□□□ -0.97
UBR4-209ENST00000465036 SF3B2Q13435 895 aaKnown RBP8.99□□□□□ -0.97
UBR4-209ENST00000465036 HGSNATQ68CP4 663 aa8.99□□□□□ -0.97
UBR4-209ENST00000465036 CYP4F12Q9HCS2 524 aa8.99□□□□□ -0.97
UBR4-209ENST00000465036 MTMR7Q9Y216 660 aa8.99□□□□□ -0.97
UBR4-209ENST00000465036 GAS2O43903 313 aaKnown RBP8.98□□□□□ -0.97
UBR4-209ENST00000465036 ADAMTS4O75173 837 aa8.98□□□□□ -0.97
UBR4-209ENST00000465036 MAP4P27816 1152 aaKnown RBP8.98□□□□□ -0.97
UBR4-209ENST00000465036 TXKP42681 527 aa8.98□□□□□ -0.97
UBR4-209ENST00000465036 NUTM2GQ5VZR2 741 aa8.98□□□□□ -0.97
UBR4-209ENST00000465036 GIMAP7Q8NHV1 300 aa8.98□□□□□ -0.97
UBR4-209ENST00000465036 LOC100289279A0A1B0GTE1 492 aa8.97□□□□□ -0.97
UBR4-209ENST00000465036 WNT11O96014 354 aa8.97□□□□□ -0.97
UBR4-209ENST00000465036 FKBP4Q02790 459 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBR4-209ENST00000465036 EXOSC6Q5RKV6 272 aaKnown RBP8.97□□□□□ -0.97
UBR4-209ENST00000465036 AMOTL2Q9Y2J4 779 aa8.97□□□□□ -0.97
UBR4-209ENST00000465036 FZD6O60353 706 aa8.96□□□□□ -0.98
UBR4-209ENST00000465036 ESRRAP11474 423 aaPredicted RBP8.96□□□□□ -0.98
UBR4-209ENST00000465036 PEAR1Q5VY43 1037 aaPredicted RBP8.96□□□□□ -0.98
UBR4-209ENST00000465036 GJD3Q8N144 294 aa8.96□□□□□ -0.98
UBR4-209ENST00000465036 PIM2Q9P1W9 311 aa8.96□□□□□ -0.98
UBR4-209ENST00000465036 WDR64B1ANS9 1081 aa8.95□□□□□ -0.98
UBR4-209ENST00000465036 TAL1P17542 331 aaPredicted RBP8.95□□□□□ -0.98
UBR4-209ENST00000465036 MTMR3Q13615 1198 aa8.95□□□□□ -0.98
UBR4-209ENST00000465036 C12orf50Q8NA57 414 aaPredicted RBP8.95□□□□□ -0.98
UBR4-209ENST00000465036 ZFYVE28Q9HCC9 887 aa8.95□□□□□ -0.98
UBR4-209ENST00000465036 FOXD3Q9UJU5 478 aaPredicted RBP8.95□□□□□ -0.98
UBR4-209ENST00000465036 AAMPQ13685 434 aa8.94□□□□□ -0.98
UBR4-209ENST00000465036 SGO2Q562F6 1265 aa8.94□□□□□ -0.98
UBR4-209ENST00000465036 PHLDB3Q6NSJ2 640 aa8.94□□□□□ -0.98
UBR4-209ENST00000465036 ASAP3Q8TDY4 903 aa8.93□□□□□ -0.98
UBR4-209ENST00000465036 MFSD14AQ96MC6 490 aa8.93□□□□□ -0.98
UBR4-209ENST00000465036 USP26Q9BXU7 913 aa8.93□□□□□ -0.98
UBR4-209ENST00000465036 NRSN2Q9GZP1 204 aa8.93□□□□□ -0.98
UBR4-209ENST00000465036 ATG3Q9NT62 314 aa8.93□□□□□ -0.98
UBR4-209ENST00000465036 ARID3CA6NKF2 412 aa8.92□□□□□ -0.98
UBR4-209ENST00000465036 DLGAP3O95886 979 aa8.92□□□□□ -0.98
UBR4-209ENST00000465036 EZH1Q92800 747 aaPredicted RBP8.92□□□□□ -0.98
UBR4-209ENST00000465036 FAM95CA0A1B0GW59 222 aa8.91□□□□□ -0.98
UBR4-209ENST00000465036 F13BP05160 661 aa8.91□□□□□ -0.98
UBR4-209ENST00000465036 FOSL1P15407 271 aa8.91□□□□□ -0.98
UBR4-209ENST00000465036 PAOXQ6QHF9 649 aa8.91□□□□□ -0.98
UBR4-209ENST00000465036 METTL22Q9BUU2 404 aaPredicted RBP8.91□□□□□ -0.98
UBR4-209ENST00000465036 LEMD3Q9Y2U8 911 aa8.91□□□□□ -0.98
UBR4-209ENST00000465036 BTBD11A6QL63 1104 aa8.9□□□□□ -0.98
UBR4-209ENST00000465036 PRNPP04156 253 aa8.9□□□□□ -0.98
UBR4-209ENST00000465036 SOX4Q06945 474 aaPredicted RBP8.9□□□□□ -0.98
UBR4-209ENST00000465036 MSMPQ1L6U9 139 aa8.9□□□□□ -0.98
UBR4-209ENST00000465036 CCNJLQ8IV13 435 aa8.9□□□□□ -0.98
UBR4-209ENST00000465036 GALNT12Q8IXK2 581 aa8.9□□□□□ -0.98
UBR4-209ENST00000465036 CCDC82Q8N4S0 544 aa8.9□□□□□ -0.98
UBR4-209ENST00000465036 C2CD4AQ8NCU7 369 aaPredicted RBP8.9□□□□□ -0.98
UBR4-209ENST00000465036 LATS2Q9NRM7 1088 aa8.9□□□□□ -0.98
UBR4-209ENST00000465036 ADGRE2Q9UHX3 823 aa8.9□□□□□ -0.98
UBR4-209ENST00000465036 RXRBP28702 533 aa8.89□□□□□ -0.99
UBR4-209ENST00000465036 HOXA10P31260 410 aaPredicted RBP8.89□□□□□ -0.99
UBR4-209ENST00000465036 USP11P51784 963 aa8.89□□□□□ -0.99
UBR4-209ENST00000465036 GSTM4Q03013 218 aa8.89□□□□□ -0.99
UBR4-209ENST00000465036 HP1BP3Q5SSJ5 553 aaPredicted RBP8.89□□□□□ -0.99
UBR4-209ENST00000465036 YIPF2Q9BWQ6 316 aa8.89□□□□□ -0.99
UBR4-209ENST00000465036 OSBPL1AQ9BXW6 950 aa8.89□□□□□ -0.99
UBR4-209ENST00000465036 CLEC4MQ9H2X3 399 aaPredicted RBP8.89□□□□□ -0.99
UBR4-209ENST00000465036 ZFYVE1Q9HBF4 777 aa8.89□□□□□ -0.99
UBR4-209ENST00000465036 CCDC87Q9NVE4 849 aa8.89□□□□□ -0.99
UBR4-209ENST00000465036 EGFL7Q9UHF1 273 aa8.89□□□□□ -0.99
UBR4-209ENST00000465036 A0A096LPE4 126 aa8.88□□□□□ -0.99
UBR4-209ENST00000465036 A0A1W2PPZ6 126 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms