RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 VEZTQ9HBM0 779 aa17.41■□□□□ 0.38
RPP40-203ENST00000464646 FRAT2O75474 233 aaPredicted RBP17.4■□□□□ 0.38
RPP40-203ENST00000464646 NBPF7P0C2Y1 421 aaPredicted RBP17.4■□□□□ 0.38
RPP40-203ENST00000464646 RNF186Q9NXI6 227 aa17.4■□□□□ 0.38
RPP40-203ENST00000464646 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
RPP40-203ENST00000464646 CLRN2A0PK11 232 aa17.39■□□□□ 0.37
RPP40-203ENST00000464646 GYG1P46976 350 aa17.39■□□□□ 0.37
RPP40-203ENST00000464646 MMP14P50281 582 aa17.39■□□□□ 0.37
RPP40-203ENST00000464646 CFAP100Q494V2 611 aa17.39■□□□□ 0.37
RPP40-203ENST00000464646 CSRNP1Q96S65 589 aa17.39■□□□□ 0.37
RPP40-203ENST00000464646 PUS3Q9BZE2 481 aaKnown RBP17.39■□□□□ 0.37
RPP40-203ENST00000464646 MCOLN1Q9GZU1 580 aa17.39■□□□□ 0.37
RPP40-203ENST00000464646 BICC1Q9H694 974 aaKnown RBP17.39■□□□□ 0.37
RPP40-203ENST00000464646 A0A1B0GUL6 1792 aa17.38■□□□□ 0.37
RPP40-203ENST00000464646 METTL24Q5JXM2 366 aa17.38■□□□□ 0.37
RPP40-203ENST00000464646 CERS5Q8N5B7 392 aa17.38■□□□□ 0.37
RPP40-203ENST00000464646 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
RPP40-203ENST00000464646 SMC4Q9NTJ3 1288 aa17.38■□□□□ 0.37
RPP40-203ENST00000464646 ANGEL1Q9UNK9 670 aaKnown RBP17.38■□□□□ 0.37
RPP40-203ENST00000464646 IL1R1P14778 569 aa17.37■□□□□ 0.37
RPP40-203ENST00000464646 HIBADHP31937 336 aaKnown RBP17.37■□□□□ 0.37
RPP40-203ENST00000464646 CHAF1AQ13111 956 aaPredicted RBP17.37■□□□□ 0.37
RPP40-203ENST00000464646 C15orf52Q6ZUT6 534 aaKnown RBP17.37■□□□□ 0.37
RPP40-203ENST00000464646 IQSEC3Q9UPP2 1182 aaPredicted RBP17.37■□□□□ 0.37
RPP40-203ENST00000464646 PCDHAC2Q9Y5I4 1007 aa17.37■□□□□ 0.37
RPP40-203ENST00000464646 PTPRCP08575 1304 aa17.37■□□□□ 0.37
RPP40-203ENST00000464646 ZNF521Q96K83 1311 aa17.37■□□□□ 0.37
RPP40-203ENST00000464646 ZNF646O15015 1829 aaPredicted RBP17.37■□□□□ 0.37
RPP40-203ENST00000464646 UBE4AQ14139 1066 aa17.36■□□□□ 0.37
RPP40-203ENST00000464646 MFSD14BQ5SR56 506 aa17.36■□□□□ 0.37
RPP40-203ENST00000464646 CDCA7LQ96GN5 454 aa17.36■□□□□ 0.37
RPP40-203ENST00000464646 SAGE1Q9NXZ1 904 aa17.36■□□□□ 0.37
RPP40-203ENST00000464646 FZD1Q9UP38 647 aa17.36■□□□□ 0.37
RPP40-203ENST00000464646 SLFN5Q08AF3 891 aa17.35■□□□□ 0.37
RPP40-203ENST00000464646 LRRC24Q50LG9 513 aa17.35■□□□□ 0.37
RPP40-203ENST00000464646 CAVIN4Q5BKX8 364 aa17.35■□□□□ 0.37
RPP40-203ENST00000464646 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
RPP40-203ENST00000464646 DEFB129Q9H1M3 183 aa17.35■□□□□ 0.37
RPP40-203ENST00000464646 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
RPP40-203ENST00000464646 MROH5Q6ZUA9 1318 aa17.35■□□□□ 0.37
RPP40-203ENST00000464646 PTPN12Q05209 780 aaKnown RBP17.34■□□□□ 0.37
RPP40-203ENST00000464646 KLHDC4Q8TBB5 520 aa17.34■□□□□ 0.37
RPP40-203ENST00000464646 KAZALD1Q96I82 304 aa17.34■□□□□ 0.37
RPP40-203ENST00000464646 IRS2Q9Y4H2 1338 aa17.33■□□□□ 0.36
RPP40-203ENST00000464646 PPP1R12BO60237 982 aaPredicted RBP17.33■□□□□ 0.36
RPP40-203ENST00000464646 TBC1D8O95759 1140 aa17.33■□□□□ 0.36
RPP40-203ENST00000464646 SLC10A4Q96EP9 437 aa17.33■□□□□ 0.36
RPP40-203ENST00000464646 FAM84BQ96KN1 310 aaPredicted RBP17.33■□□□□ 0.36
RPP40-203ENST00000464646 PRMT6Q96LA8 375 aaPredicted RBP17.33■□□□□ 0.36
RPP40-203ENST00000464646 SPDYE2BA6NHP3 402 aa17.32■□□□□ 0.36
RPP40-203ENST00000464646 SPDYE6P0CI01 402 aa17.32■□□□□ 0.36
RPP40-203ENST00000464646 FKBP1AP62942 108 aaKnown RBP17.32■□□□□ 0.36
RPP40-203ENST00000464646 SREBF2Q12772 1141 aa17.32■□□□□ 0.36
RPP40-203ENST00000464646 TDRD7Q8NHU6 1098 aaKnown RBP17.32■□□□□ 0.36
RPP40-203ENST00000464646 ZBED3Q96IU2 234 aaPredicted RBP17.32■□□□□ 0.36
RPP40-203ENST00000464646 RIPOR2Q9Y4F9 1068 aa17.32■□□□□ 0.36
RPP40-203ENST00000464646 ECM29Q5VYK3 1845 aa17.31■□□□□ 0.36
RPP40-203ENST00000464646 UTYO14607 1347 aa17.31■□□□□ 0.36
RPP40-203ENST00000464646 ALDH1L2Q3SY69 923 aa17.31■□□□□ 0.36
RPP40-203ENST00000464646 SUPT20HL1Q3ZLR7 823 aa17.31■□□□□ 0.36
RPP40-203ENST00000464646 ANKRD44Q8N8A2 993 aa17.31■□□□□ 0.36
RPP40-203ENST00000464646 MTMR14Q8NCE2 650 aa17.31■□□□□ 0.36
RPP40-203ENST00000464646 TCP10L2B9ZVM9 353 aa17.3■□□□□ 0.36
RPP40-203ENST00000464646 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
RPP40-203ENST00000464646 RABL6Q3YEC7 729 aaPredicted RBP17.3■□□□□ 0.36
RPP40-203ENST00000464646 USP44Q9H0E7 712 aa17.3■□□□□ 0.36
RPP40-203ENST00000464646 TDRD3Q9H7E2 651 aaKnown RBP17.3■□□□□ 0.36
RPP40-203ENST00000464646 NOB1Q9ULX3 412 aaKnown RBP17.3■□□□□ 0.36
RPP40-203ENST00000464646 PPP2R3BQ9Y5P8 575 aa17.3■□□□□ 0.36
RPP40-203ENST00000464646 FAM205AQ6ZU69 1335 aa17.29■□□□□ 0.36
RPP40-203ENST00000464646 UBTFL1P0CB47 393 aaPredicted RBP17.29■□□□□ 0.36
RPP40-203ENST00000464646 IREB2P48200 963 aaKnown RBP17.29■□□□□ 0.36
RPP40-203ENST00000464646 TNFAIP1Q13829 316 aa17.29■□□□□ 0.36
RPP40-203ENST00000464646 RASA3Q14644 834 aa17.29■□□□□ 0.36
RPP40-203ENST00000464646 NBPF12Q5TAG4 269 aaPredicted RBP17.29■□□□□ 0.36
RPP40-203ENST00000464646 SIL1Q9H173 461 aa17.29■□□□□ 0.36
RPP40-203ENST00000464646 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
RPP40-203ENST00000464646 PDE8BO95263 885 aa17.28■□□□□ 0.36
RPP40-203ENST00000464646 CRKP46108 304 aa17.28■□□□□ 0.36
RPP40-203ENST00000464646 BCAMP50895 628 aa17.28■□□□□ 0.36
RPP40-203ENST00000464646 ZNF70Q9UC06 446 aaPredicted RBP17.28■□□□□ 0.36
RPP40-203ENST00000464646 AOX1Q06278 1338 aa17.27■□□□□ 0.36
RPP40-203ENST00000464646 SLC5A1P13866 664 aa17.27■□□□□ 0.36
RPP40-203ENST00000464646 TNNI2P48788 182 aa17.27■□□□□ 0.36
RPP40-203ENST00000464646 MLLT1Q03111 559 aaPredicted RBP17.27■□□□□ 0.36
RPP40-203ENST00000464646 SPRYD7Q5W111 196 aa17.27■□□□□ 0.36
RPP40-203ENST00000464646 CTU1Q7Z7A3 348 aaKnown RBP17.27■□□□□ 0.36
RPP40-203ENST00000464646 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.36
RPP40-203ENST00000464646 TBC1D22AQ8WUA7 517 aa17.27■□□□□ 0.36
RPP40-203ENST00000464646 CLMNQ96JQ2 1002 aa17.27■□□□□ 0.36
RPP40-203ENST00000464646 TMOD2Q9NZR1 351 aa17.27■□□□□ 0.36
RPP40-203ENST00000464646 SERPINA10Q9UK55 444 aa17.27■□□□□ 0.36
RPP40-203ENST00000464646 EYA2O00167 538 aa17.26■□□□□ 0.35
RPP40-203ENST00000464646 TM4SF4P48230 202 aa17.26■□□□□ 0.35
RPP40-203ENST00000464646 PUM3Q15397 648 aaKnown RBP17.26■□□□□ 0.35
RPP40-203ENST00000464646 FBXO33Q7Z6M2 555 aa17.26■□□□□ 0.35
RPP40-203ENST00000464646 ZNF296Q8WUU4 475 aaPredicted RBP17.26■□□□□ 0.35
RPP40-203ENST00000464646 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
RPP40-203ENST00000464646 MANSC4A6NHS7 340 aaPredicted RBP17.25■□□□□ 0.35
RPP40-203ENST00000464646 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms