RNA–Protein interactions for RNA: ENST00000464321.5

NSMCE4A-204, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE4A, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-204ENST00000464321 CTCFP49711 727 aaPredicted RBP30.13■■■□□ 2.41
NSMCE4A-204ENST00000464321 LBX1P52954 281 aa30.13■■■□□ 2.41
NSMCE4A-204ENST00000464321 TNS4Q8IZW8 715 aa30.13■■■□□ 2.41
NSMCE4A-204ENST00000464321 VGLL2Q8N8G2 317 aa30.13■■■□□ 2.41
NSMCE4A-204ENST00000464321 ZBED3Q96IU2 234 aaPredicted RBP30.13■■■□□ 2.41
NSMCE4A-204ENST00000464321 TNNQ9UQP3 1299 aa30.13■■■□□ 2.41
NSMCE4A-204ENST00000464321 UBTFL1P0CB47 393 aaPredicted RBP30.12■■■□□ 2.41
NSMCE4A-204ENST00000464321 HIBADHP31937 336 aaKnown RBP30.12■■■□□ 2.41
NSMCE4A-204ENST00000464321 TDRD7Q8NHU6 1098 aaKnown RBP30.12■■■□□ 2.41
NSMCE4A-204ENST00000464321 ARAP2Q8WZ64 1704 aa30.11■■■□□ 2.41
NSMCE4A-204ENST00000464321 ECM29Q5VYK3 1845 aa30.11■■■□□ 2.41
NSMCE4A-204ENST00000464321 BCAR3O75815 825 aa30.11■■■□□ 2.41
NSMCE4A-204ENST00000464321 HSPA8P11142 646 aaKnown RBP30.11■■■□□ 2.41
NSMCE4A-204ENST00000464321 MAP2K2P36507 400 aa30.11■■■□□ 2.41
NSMCE4A-204ENST00000464321 RGMBQ6NW40 437 aa30.1■■■□□ 2.41
NSMCE4A-204ENST00000464321 MOB2Q70IA6 237 aa30.1■■■□□ 2.41
NSMCE4A-204ENST00000464321 MEIS3Q99687 375 aa30.1■■■□□ 2.41
NSMCE4A-204ENST00000464321 IQSEC3Q9UPP2 1182 aaPredicted RBP30.1■■■□□ 2.41
NSMCE4A-204ENST00000464321 KIF16BQ96L93 1317 aa30.1■■■□□ 2.41
NSMCE4A-204ENST00000464321 PAPPA2Q9BXP8 1791 aa30.1■■■□□ 2.41
NSMCE4A-204ENST00000464321 FAM155AB1AL88 458 aaPredicted RBP30.09■■■□□ 2.41
NSMCE4A-204ENST00000464321 PDE8BO95263 885 aa30.09■■■□□ 2.41
NSMCE4A-204ENST00000464321 PTPN12Q05209 780 aaKnown RBP30.09■■■□□ 2.41
NSMCE4A-204ENST00000464321 AOX1Q06278 1338 aa30.09■■■□□ 2.41
NSMCE4A-204ENST00000464321 FAM205AQ6ZU69 1335 aa30.09■■■□□ 2.41
NSMCE4A-204ENST00000464321 TSKSQ9UJT2 592 aa30.09■■■□□ 2.41
NSMCE4A-204ENST00000464321 LRRFIP2Q9Y608 721 aaKnown RBP30.09■■■□□ 2.41
NSMCE4A-204ENST00000464321 MMP14P50281 582 aa30.08■■■□□ 2.41
NSMCE4A-204ENST00000464321 FKBP1AP62942 108 aaKnown RBP30.08■■■□□ 2.41
NSMCE4A-204ENST00000464321 DLGAP5Q15398 846 aa30.07■■■□□ 2.4
NSMCE4A-204ENST00000464321 FBXO33Q7Z6M2 555 aa30.07■■■□□ 2.4
NSMCE4A-204ENST00000464321 PRDM10Q9NQV6 1147 aa30.07■■■□□ 2.4
NSMCE4A-204ENST00000464321 EYA2O00167 538 aa30.06■■■□□ 2.4
NSMCE4A-204ENST00000464321 ZNF157P51786 506 aaPredicted RBP30.06■■■□□ 2.4
NSMCE4A-204ENST00000464321 CFAP100Q494V2 611 aa30.06■■■□□ 2.4
NSMCE4A-204ENST00000464321 ATG9AQ7Z3C6 839 aa30.06■■■□□ 2.4
NSMCE4A-204ENST00000464321 ARHGAP45Q92619 1136 aa30.06■■■□□ 2.4
NSMCE4A-204ENST00000464321 SIL1Q9H173 461 aa30.06■■■□□ 2.4
NSMCE4A-204ENST00000464321 MFSD14BQ5SR56 506 aa30.05■■■□□ 2.4
NSMCE4A-204ENST00000464321 INTS3Q68E01 1043 aaKnown RBP30.05■■■□□ 2.4
NSMCE4A-204ENST00000464321 FRAT1Q92837 279 aaPredicted RBP30.05■■■□□ 2.4
NSMCE4A-204ENST00000464321 BEGAINQ9BUH8 593 aa30.05■■■□□ 2.4
NSMCE4A-204ENST00000464321 TRIM27P14373 513 aa30.04■■■□□ 2.4
NSMCE4A-204ENST00000464321 BCAMP50895 628 aa30.04■■■□□ 2.4
NSMCE4A-204ENST00000464321 NOGQ13253 232 aa30.04■■■□□ 2.4
NSMCE4A-204ENST00000464321 VPS37DQ86XT2 251 aa30.04■■■□□ 2.4
NSMCE4A-204ENST00000464321 MTMR14Q8NCE2 650 aa30.04■■■□□ 2.4
NSMCE4A-204ENST00000464321 FGFR2P21802 821 aa30.03■■■□□ 2.4
NSMCE4A-204ENST00000464321 CHAF1AQ13111 956 aaPredicted RBP30.03■■■□□ 2.4
NSMCE4A-204ENST00000464321 GRIK5Q16478 980 aa30.03■■■□□ 2.4
NSMCE4A-204ENST00000464321 APOBEC3FQ8IUX4 373 aaKnown RBP30.03■■■□□ 2.4
NSMCE4A-204ENST00000464321 PRMT6Q96LA8 375 aaPredicted RBP30.03■■■□□ 2.4
NSMCE4A-204ENST00000464321 PA2G4Q9UQ80 394 aaKnown RBP30.03■■■□□ 2.4
NSMCE4A-204ENST00000464321 CLRN2A0PK11 232 aa30.02■■■□□ 2.4
NSMCE4A-204ENST00000464321 SPDYE2BA6NHP3 402 aa30.02■■■□□ 2.4
NSMCE4A-204ENST00000464321 UBE2Q2LH0YL09 131 aa30.02■■■□□ 2.4
NSMCE4A-204ENST00000464321 SPDYE6P0CI01 402 aa30.02■■■□□ 2.4
NSMCE4A-204ENST00000464321 PUM3Q15397 648 aaKnown RBP30.02■■■□□ 2.4
NSMCE4A-204ENST00000464321 MYH13Q9UKX3 1938 aa30.02■■■□□ 2.4
NSMCE4A-204ENST00000464321 CAVIN4Q5BKX8 364 aa30.01■■■□□ 2.39
NSMCE4A-204ENST00000464321 CLUAP1Q96AJ1 413 aa30.01■■■□□ 2.39
NSMCE4A-204ENST00000464321 TTF2Q9UNY4 1162 aaKnown RBP30.01■■■□□ 2.39
NSMCE4A-204ENST00000464321 CAPN15O75808 1086 aa30■■■□□ 2.39
NSMCE4A-204ENST00000464321 SLC10A3P09131 477 aa30■■■□□ 2.39
NSMCE4A-204ENST00000464321 RBM5P52756 815 aaKnown RBP eCLIP30■■■□□ 2.39
NSMCE4A-204ENST00000464321 FKBP1BP68106 108 aa30■■■□□ 2.39
NSMCE4A-204ENST00000464321 KIF23Q02241 960 aaPredicted RBP30■■■□□ 2.39
NSMCE4A-204ENST00000464321 ATF7IPQ6VMQ6 1270 aa30■■■□□ 2.39
NSMCE4A-204ENST00000464321 CCDC102AQ96A19 550 aa30■■■□□ 2.39
NSMCE4A-204ENST00000464321 PRKG1Q13976 671 aa29.99■■■□□ 2.39
NSMCE4A-204ENST00000464321 TTLL12Q14166 644 aaPredicted RBP29.99■■■□□ 2.39
NSMCE4A-204ENST00000464321 RASAL3Q86YV0 1011 aa29.99■■■□□ 2.39
NSMCE4A-204ENST00000464321 FZD1Q9UP38 647 aa29.99■■■□□ 2.39
NSMCE4A-204ENST00000464321 IPO8O15397 1037 aaKnown RBP29.98■■■□□ 2.39
NSMCE4A-204ENST00000464321 FRAT2O75474 233 aaPredicted RBP29.98■■■□□ 2.39
NSMCE4A-204ENST00000464321 DEFB129Q9H1M3 183 aa29.98■■■□□ 2.39
NSMCE4A-204ENST00000464321 IFIT1P09914 478 aaKnown RBP29.97■■■□□ 2.39
NSMCE4A-204ENST00000464321 VEZTQ9HBM0 779 aa29.97■■■□□ 2.39
NSMCE4A-204ENST00000464321 SSC5DA1L4H1 1573 aa29.96■■■□□ 2.39
NSMCE4A-204ENST00000464321 CIAO1O76071 339 aa29.96■■■□□ 2.39
NSMCE4A-204ENST00000464321 COL1A1P02452 1464 aaPredicted RBP29.95■■■□□ 2.39
NSMCE4A-204ENST00000464321 GNAI3P08754 354 aa29.95■■■□□ 2.39
NSMCE4A-204ENST00000464321 SLC5A1P13866 664 aa29.95■■■□□ 2.39
NSMCE4A-204ENST00000464321 NF2P35240 595 aa29.95■■■□□ 2.39
NSMCE4A-204ENST00000464321 LPIN2Q92539 896 aa29.95■■■□□ 2.39
NSMCE4A-204ENST00000464321 CASP8AP2Q9UKL3 1982 aa29.95■■■□□ 2.38
NSMCE4A-204ENST00000464321 AKAP11Q9UKA4 1901 aa29.94■■■□□ 2.38
NSMCE4A-204ENST00000464321 MYO1BO43795 1136 aa29.94■■■□□ 2.38
NSMCE4A-204ENST00000464321 SERPINA10Q9UK55 444 aa29.94■■■□□ 2.38
NSMCE4A-204ENST00000464321 HDAC5Q9UQL6 1122 aa29.94■■■□□ 2.38
NSMCE4A-204ENST00000464321 CRKP46108 304 aa29.93■■■□□ 2.38
NSMCE4A-204ENST00000464321 ATP2B3Q16720 1220 aa29.93■■■□□ 2.38
NSMCE4A-204ENST00000464321 TDRD3Q9H7E2 651 aaKnown RBP29.93■■■□□ 2.38
NSMCE4A-204ENST00000464321 COPRSQ9NQ92 184 aa29.93■■■□□ 2.38
NSMCE4A-204ENST00000464321 CEP126Q9P2H0 1117 aa29.93■■■□□ 2.38
NSMCE4A-204ENST00000464321 DZIP1LQ8IYY4 767 aaKnown RBP29.92■■■□□ 2.38
NSMCE4A-204ENST00000464321 TMEM57Q8N5G2 664 aa29.92■■■□□ 2.38
NSMCE4A-204ENST00000464321 ZNF70Q9UC06 446 aaPredicted RBP29.92■■■□□ 2.38
NSMCE4A-204ENST00000464321 FBXO3Q9UK99 471 aa29.92■■■□□ 2.38
NSMCE4A-204ENST00000464321 ZBED9Q6R2W3 1325 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms