RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 C2orf69Q8N8R5 385 aa16.47■□□□□ 0.23
CTDSP1-206ENST00000464255 TDRD7Q8NHU6 1098 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-206ENST00000464255 PCDHAC2Q9Y5I4 1007 aa16.47■□□□□ 0.23
CTDSP1-206ENST00000464255 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-206ENST00000464255 RGMBQ6NW40 437 aa16.46■□□□□ 0.23
CTDSP1-206ENST00000464255 JAG2Q9Y219 1238 aa16.46■□□□□ 0.23
CTDSP1-206ENST00000464255 AOX1Q06278 1338 aa16.45■□□□□ 0.22
CTDSP1-206ENST00000464255 FAM205AQ6ZU69 1335 aa16.45■□□□□ 0.22
CTDSP1-206ENST00000464255 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
CTDSP1-206ENST00000464255 MOB2Q70IA6 237 aa16.45■□□□□ 0.22
CTDSP1-206ENST00000464255 FBXO33Q7Z6M2 555 aa16.45■□□□□ 0.22
CTDSP1-206ENST00000464255 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
CTDSP1-206ENST00000464255 HIBADHP31937 336 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-206ENST00000464255 PDE8BO95263 885 aa16.43■□□□□ 0.22
CTDSP1-206ENST00000464255 FGFR2P21802 821 aa16.43■□□□□ 0.22
CTDSP1-206ENST00000464255 PTPN12Q05209 780 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-206ENST00000464255 NOGQ13253 232 aa16.43■□□□□ 0.22
CTDSP1-206ENST00000464255 ATG9AQ7Z3C6 839 aa16.43■□□□□ 0.22
CTDSP1-206ENST00000464255 PRMT6Q96LA8 375 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-206ENST00000464255 TSKSQ9UJT2 592 aa16.43■□□□□ 0.22
CTDSP1-206ENST00000464255 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
CTDSP1-206ENST00000464255 F8W031 263 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-206ENST00000464255 ZNF157P51786 506 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-206ENST00000464255 FKBP1BP68106 108 aa16.42■□□□□ 0.22
CTDSP1-206ENST00000464255 GRIK5Q16478 980 aa16.42■□□□□ 0.22
CTDSP1-206ENST00000464255 METTL24Q5JXM2 366 aa16.42■□□□□ 0.22
CTDSP1-206ENST00000464255 DIEXFQ68CQ4 756 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-206ENST00000464255 ARHGAP45Q92619 1136 aa16.42■□□□□ 0.22
CTDSP1-206ENST00000464255 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
CTDSP1-206ENST00000464255 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-206ENST00000464255 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
CTDSP1-206ENST00000464255 UBE2Q2LH0YL09 131 aa16.41■□□□□ 0.22
CTDSP1-206ENST00000464255 SLC10A3P09131 477 aa16.41■□□□□ 0.22
CTDSP1-206ENST00000464255 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
CTDSP1-206ENST00000464255 KIF23Q02241 960 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-206ENST00000464255 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
CTDSP1-206ENST00000464255 INTS3Q68E01 1043 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-206ENST00000464255 TNNQ9UQP3 1299 aa16.41■□□□□ 0.22
CTDSP1-206ENST00000464255 EYA2O00167 538 aa16.4■□□□□ 0.22
CTDSP1-206ENST00000464255 BCAR3O75815 825 aa16.4■□□□□ 0.22
CTDSP1-206ENST00000464255 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-206ENST00000464255 BCAMP50895 628 aa16.4■□□□□ 0.22
CTDSP1-206ENST00000464255 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
CTDSP1-206ENST00000464255 MFSD14BQ5SR56 506 aa16.4■□□□□ 0.22
CTDSP1-206ENST00000464255 RASAL3Q86YV0 1011 aa16.4■□□□□ 0.22
CTDSP1-206ENST00000464255 CSRNP1Q96S65 589 aa16.4■□□□□ 0.22
CTDSP1-206ENST00000464255 MEIS3Q99687 375 aa16.4■□□□□ 0.22
CTDSP1-206ENST00000464255 PAPPA2Q9BXP8 1791 aa16.39■□□□□ 0.21
CTDSP1-206ENST00000464255 APOBEC3FQ8IUX4 373 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-206ENST00000464255 BEGAINQ9BUH8 593 aa16.39■□□□□ 0.21
CTDSP1-206ENST00000464255 DEFB129Q9H1M3 183 aa16.39■□□□□ 0.21
CTDSP1-206ENST00000464255 IQSEC3Q9UPP2 1182 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-206ENST00000464255 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-206ENST00000464255 CA12O43570 354 aa16.38■□□□□ 0.21
CTDSP1-206ENST00000464255 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
CTDSP1-206ENST00000464255 CLRN2A0PK11 232 aa16.37■□□□□ 0.21
CTDSP1-206ENST00000464255 TRIM27P14373 513 aa16.37■□□□□ 0.21
CTDSP1-206ENST00000464255 PUM3Q15397 648 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-206ENST00000464255 LDLRAD1Q5T700 205 aa16.37■□□□□ 0.21
CTDSP1-206ENST00000464255 SERPINA10Q9UK55 444 aa16.37■□□□□ 0.21
CTDSP1-206ENST00000464255 TTF2Q9UNY4 1162 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-206ENST00000464255 FZD1Q9UP38 647 aa16.37■□□□□ 0.21
CTDSP1-206ENST00000464255 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
CTDSP1-206ENST00000464255 CAPN15O75808 1086 aa16.36■□□□□ 0.21
CTDSP1-206ENST00000464255 CIAO1O76071 339 aa16.36■□□□□ 0.21
CTDSP1-206ENST00000464255 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
CTDSP1-206ENST00000464255 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-206ENST00000464255 HNRNPUQ00839 825 aaKnown RBP eCLIP16.35■□□□□ 0.21
CTDSP1-206ENST00000464255 CAVIN4Q5BKX8 364 aa16.35■□□□□ 0.21
CTDSP1-206ENST00000464255 ATF7IPQ6VMQ6 1270 aa16.35■□□□□ 0.21
CTDSP1-206ENST00000464255 VPS37DQ86XT2 251 aa16.35■□□□□ 0.21
CTDSP1-206ENST00000464255 DZIP1LQ8IYY4 767 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-206ENST00000464255 LPIN2Q92539 896 aa16.35■□□□□ 0.21
CTDSP1-206ENST00000464255 SIL1Q9H173 461 aa16.35■□□□□ 0.21
CTDSP1-206ENST00000464255 COPRSQ9NQ92 184 aa16.35■□□□□ 0.21
CTDSP1-206ENST00000464255 FBXO3Q9UK99 471 aa16.35■□□□□ 0.21
CTDSP1-206ENST00000464255 CRKP46108 304 aa16.34■□□□□ 0.21
CTDSP1-206ENST00000464255 CHAF1AQ13111 956 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-206ENST00000464255 PRKG1Q13976 671 aa16.34■□□□□ 0.21
CTDSP1-206ENST00000464255 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
CTDSP1-206ENST00000464255 NBPF12Q5TAG4 269 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-206ENST00000464255 TDRD3Q9H7E2 651 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-206ENST00000464255 ZNF70Q9UC06 446 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-206ENST00000464255 COL1A1P02452 1464 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-206ENST00000464255 CASP8AP2Q9UKL3 1982 aa16.33■□□□□ 0.21
CTDSP1-206ENST00000464255 IFIT1P09914 478 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 RBM5P52756 815 aaKnown RBP eCLIP16.33■□□□□ 0.22e-6■■□□□ 13.1
CTDSP1-206ENST00000464255 MTX1Q13505 466 aa16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 TTLL12Q14166 644 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 RASA3Q14644 834 aa16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 CDAN1Q8IWY9 1227 aa16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 TEPSINQ96N21 525 aa16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 SAGE1Q9NXZ1 904 aa16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 PPP2R3BQ9Y5P8 575 aa16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-206ENST00000464255 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-206ENST00000464255 MYO1BO43795 1136 aa16.32■□□□□ 0.2
CTDSP1-206ENST00000464255 TRPA1O75762 1119 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms