RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 ANKRD18BA2A2Z9 1011 aa22.05■■□□□ 1.12
HMGN1-210ENST00000464078 ZBTB48P10074 688 aaPredicted RBP22.05■■□□□ 1.12
HMGN1-210ENST00000464078 FKBP1AP62942 108 aaKnown RBP22.05■■□□□ 1.12
HMGN1-210ENST00000464078 DLGAP5Q15398 846 aa22.05■■□□□ 1.12
HMGN1-210ENST00000464078 FANCIQ9NVI1 1328 aa22.05■■□□□ 1.12
HMGN1-210ENST00000464078 MANSC4A6NHS7 340 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-210ENST00000464078 IL1R1P14778 569 aa22.04■■□□□ 1.12
HMGN1-210ENST00000464078 INHBEP58166 350 aa22.04■■□□□ 1.12
HMGN1-210ENST00000464078 PRKG1Q13976 671 aa22.04■■□□□ 1.12
HMGN1-210ENST00000464078 ZNF804AQ7Z570 1209 aa22.03■■□□□ 1.12
HMGN1-210ENST00000464078 R3HDMLQ9H3Y0 253 aa22.03■■□□□ 1.12
HMGN1-210ENST00000464078 ARAP2Q8WZ64 1704 aa22.03■■□□□ 1.12
HMGN1-210ENST00000464078 SPDYE2BA6NHP3 402 aa22.02■■□□□ 1.12
HMGN1-210ENST00000464078 SPDYE6P0CI01 402 aa22.02■■□□□ 1.12
HMGN1-210ENST00000464078 FOXO4P98177 505 aa22.02■■□□□ 1.12
HMGN1-210ENST00000464078 IFIT5Q13325 482 aaKnown RBP22.02■■□□□ 1.12
HMGN1-210ENST00000464078 CCDC184Q52MB2 194 aa22.02■■□□□ 1.12
HMGN1-210ENST00000464078 SNAP23O00161 211 aa22.01■■□□□ 1.11
HMGN1-210ENST00000464078 MYO1BO43795 1136 aa22.01■■□□□ 1.11
HMGN1-210ENST00000464078 PPP1R12BO60237 982 aaPredicted RBP22.01■■□□□ 1.11
HMGN1-210ENST00000464078 TAF5LO75529 589 aa22.01■■□□□ 1.11
HMGN1-210ENST00000464078 IFNL1Q8IU54 200 aa22.01■■□□□ 1.11
HMGN1-210ENST00000464078 SLC10A4Q96EP9 437 aa22.01■■□□□ 1.11
HMGN1-210ENST00000464078 RBBP6Q7Z6E9 1792 aaKnown RBP22■■□□□ 1.11
HMGN1-210ENST00000464078 OTOFQ9HC10 1997 aa22■■□□□ 1.11
HMGN1-210ENST00000464078 VAMP4O75379 141 aa22■■□□□ 1.11
HMGN1-210ENST00000464078 SUPT20HL1Q3ZLR7 823 aa22■■□□□ 1.11
HMGN1-210ENST00000464078 WNK4Q96J92 1243 aa22■■□□□ 1.11
HMGN1-210ENST00000464078 FZD1Q9UP38 647 aa22■■□□□ 1.11
HMGN1-210ENST00000464078 CFAP100Q494V2 611 aa21.99■■□□□ 1.11
HMGN1-210ENST00000464078 BEND3Q5T5X7 828 aa21.99■■□□□ 1.11
HMGN1-210ENST00000464078 HELBQ8NG08 1087 aaPredicted RBP21.99■■□□□ 1.11
HMGN1-210ENST00000464078 CLMNQ96JQ2 1002 aa21.99■■□□□ 1.11
HMGN1-210ENST00000464078 PCDHAC2Q9Y5I4 1007 aa21.99■■□□□ 1.11
HMGN1-210ENST00000464078 PRMT6Q96LA8 375 aaPredicted RBP21.98■■□□□ 1.11
HMGN1-210ENST00000464078 IGF2BP3O00425 579 aaKnown RBP eCLIP21.97■■□□□ 1.11
HMGN1-210ENST00000464078 WDR63Q8IWG1 891 aa21.97■■□□□ 1.11
HMGN1-210ENST00000464078 FAM205AQ6ZU69 1335 aa21.97■■□□□ 1.11
HMGN1-210ENST00000464078 CLRN2A0PK11 232 aa21.96■■□□□ 1.11
HMGN1-210ENST00000464078 F8W031 263 aaPredicted RBP21.96■■□□□ 1.11
HMGN1-210ENST00000464078 IREB2P48200 963 aaKnown RBP21.96■■□□□ 1.11
HMGN1-210ENST00000464078 LMBR1LQ6UX01 489 aa21.96■■□□□ 1.11
HMGN1-210ENST00000464078 AOX1Q06278 1338 aa21.96■■□□□ 1.11
HMGN1-210ENST00000464078 F6X3S4 739 aa21.95■■□□□ 1.1
HMGN1-210ENST00000464078 GRM8O00222 908 aa21.95■■□□□ 1.1
HMGN1-210ENST00000464078 CCDC57Q2TAC2 916 aa21.95■■□□□ 1.1
HMGN1-210ENST00000464078 EPHA10Q5JZY3 1008 aa21.95■■□□□ 1.1
HMGN1-210ENST00000464078 NBPF12Q5TAG4 269 aaPredicted RBP21.95■■□□□ 1.1
HMGN1-210ENST00000464078 OTOP1Q7RTM1 612 aa21.95■■□□□ 1.1
HMGN1-210ENST00000464078 VEZTQ9HBM0 779 aa21.95■■□□□ 1.1
HMGN1-210ENST00000464078 CHMP3Q9Y3E7 222 aa21.95■■□□□ 1.1
HMGN1-210ENST00000464078 KIAA0100Q14667 2235 aaKnown RBP21.95■■□□□ 1.1
HMGN1-210ENST00000464078 EXOSC9Q06265 439 aaKnown RBP21.94■■□□□ 1.1
HMGN1-210ENST00000464078 TNFAIP1Q13829 316 aa21.94■■□□□ 1.1
HMGN1-210ENST00000464078 RASA3Q14644 834 aa21.94■■□□□ 1.1
HMGN1-210ENST00000464078 LDHAL6AQ6ZMR3 332 aa21.94■■□□□ 1.1
HMGN1-210ENST00000464078 ANKRD13AQ8IZ07 590 aa21.94■■□□□ 1.1
HMGN1-210ENST00000464078 TRIM17Q9Y577 477 aa21.94■■□□□ 1.1
HMGN1-210ENST00000464078 TESPA1A2RU30 521 aaPredicted RBP21.93■■□□□ 1.1
HMGN1-210ENST00000464078 USP2O75604 605 aaPredicted RBP21.93■■□□□ 1.1
HMGN1-210ENST00000464078 SPDYE2Q495Y8 402 aa21.93■■□□□ 1.1
HMGN1-210ENST00000464078 INTS3Q68E01 1043 aaKnown RBP21.93■■□□□ 1.1
HMGN1-210ENST00000464078 ERO1AQ96HE7 468 aa21.93■■□□□ 1.1
HMGN1-210ENST00000464078 SERPINA10Q9UK55 444 aa21.93■■□□□ 1.1
HMGN1-210ENST00000464078 CENPFP49454 3210 aa21.92■■□□□ 1.1
HMGN1-210ENST00000464078 GJA5P36382 358 aa21.92■■□□□ 1.1
HMGN1-210ENST00000464078 UBE4AQ14139 1066 aa21.92■■□□□ 1.1
HMGN1-210ENST00000464078 TAF7LQ5H9L4 462 aa21.92■■□□□ 1.1
HMGN1-210ENST00000464078 OTUD7BQ6GQQ9 843 aa21.92■■□□□ 1.1
HMGN1-210ENST00000464078 TDRD7Q8NHU6 1098 aaKnown RBP21.92■■□□□ 1.1
HMGN1-210ENST00000464078 ZNF594Q96JF6 807 aaPredicted RBP21.92■■□□□ 1.1
HMGN1-210ENST00000464078 CNNM1Q9NRU3 951 aa21.92■■□□□ 1.1
HMGN1-210ENST00000464078 JAG2Q9Y219 1238 aa21.92■■□□□ 1.1
HMGN1-210ENST00000464078 ALDH1L1O75891 902 aa21.91■■□□□ 1.1
HMGN1-210ENST00000464078 CRHR2Q13324 411 aa21.91■■□□□ 1.1
HMGN1-210ENST00000464078 MFSD14BQ5SR56 506 aa21.91■■□□□ 1.1
HMGN1-210ENST00000464078 MKI67P46013 3256 aaKnown RBP21.91■■□□□ 1.1
HMGN1-210ENST00000464078 RBM5P52756 815 aaKnown RBP eCLIP21.9■■□□□ 1.1
HMGN1-210ENST00000464078 ARMC5Q96C12 935 aa21.89■■□□□ 1.09
HMGN1-210ENST00000464078 TEPSINQ96N21 525 aa21.89■■□□□ 1.09
HMGN1-210ENST00000464078 PTPN18Q99952 460 aa21.89■■□□□ 1.09
HMGN1-210ENST00000464078 ZNF70Q9UC06 446 aaPredicted RBP21.89■■□□□ 1.09
HMGN1-210ENST00000464078 TTF2Q9UNY4 1162 aaKnown RBP21.89■■□□□ 1.09
HMGN1-210ENST00000464078 PTPN22Q9Y2R2 807 aa21.89■■□□□ 1.09
HMGN1-210ENST00000464078 PLIN1O60240 522 aa21.88■■□□□ 1.09
HMGN1-210ENST00000464078 HIBADHP31937 336 aaKnown RBP21.88■■□□□ 1.09
HMGN1-210ENST00000464078 FAM84BQ96KN1 310 aaPredicted RBP21.88■■□□□ 1.09
HMGN1-210ENST00000464078 MRS2Q9HD23 443 aa21.88■■□□□ 1.09
HMGN1-210ENST00000464078 C9orf78Q9NZ63 289 aaPredicted RBP21.88■■□□□ 1.09
HMGN1-210ENST00000464078 DZIP1LQ8IYY4 767 aaKnown RBP21.87■■□□□ 1.09
HMGN1-210ENST00000464078 CD99L2Q8TCZ2 262 aa21.87■■□□□ 1.09
HMGN1-210ENST00000464078 GCC1Q96CN9 775 aa21.87■■□□□ 1.09
HMGN1-210ENST00000464078 OPTNQ96CV9 577 aa21.87■■□□□ 1.09
HMGN1-210ENST00000464078 MS4A4AQ96JQ5 239 aa21.87■■□□□ 1.09
HMGN1-210ENST00000464078 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.87■■□□□ 1.09
HMGN1-210ENST00000464078 GYG1P46976 350 aa21.86■■□□□ 1.09
HMGN1-210ENST00000464078 SP3Q02447 781 aa21.86■■□□□ 1.09
HMGN1-210ENST00000464078 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.86■■□□□ 1.09
HMGN1-210ENST00000464078 KAZALD1Q96I82 304 aa21.86■■□□□ 1.09
HMGN1-210ENST00000464078 SRCIN1Q9C0H9 1055 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms