RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 PDE6AP16499 860 aa22.81■■□□□ 1.24
CCDC78-206ENST00000463539 UBE3CQ15386 1083 aa22.81■■□□□ 1.24
CCDC78-206ENST00000463539 STYK1Q6J9G0 422 aa22.81■■□□□ 1.24
CCDC78-206ENST00000463539 PRPF40BQ6NWY9 871 aaKnown RBP22.81■■□□□ 1.24
CCDC78-206ENST00000463539 C15orf52Q6ZUT6 534 aaKnown RBP22.81■■□□□ 1.24
CCDC78-206ENST00000463539 WWC3Q9ULE0 1092 aa22.81■■□□□ 1.24
CCDC78-206ENST00000463539 PDS5AQ29RF7 1337 aaKnown RBP22.8■■□□□ 1.24
CCDC78-206ENST00000463539 NECTIN1Q15223 517 aa22.8■■□□□ 1.24
CCDC78-206ENST00000463539 ZNF804AQ7Z570 1209 aa22.8■■□□□ 1.24
CCDC78-206ENST00000463539 TMX4Q9H1E5 349 aaPredicted RBP22.8■■□□□ 1.24
CCDC78-206ENST00000463539 LRP2BPQ9P2M1 347 aa22.8■■□□□ 1.24
CCDC78-206ENST00000463539 SNX14Q9Y5W7 946 aa22.8■■□□□ 1.24
CCDC78-206ENST00000463539 LRRC37AA6NMS7 1700 aa22.79■■□□□ 1.24
CCDC78-206ENST00000463539 ZNF532Q9HCE3 1301 aa22.79■■□□□ 1.24
CCDC78-206ENST00000463539 C10orf71Q711Q0 1435 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 ZBTB22O15209 634 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 ST18O60284 1047 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 ZKSCAN1P17029 563 aaPredicted RBP22.78■■□□□ 1.24
CCDC78-206ENST00000463539 RNF20Q5VTR2 975 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 ILDR2Q71H61 639 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 RASEFQ8IZ41 740 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 TBC1D16Q8TBP0 767 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 UPF1Q92900 1129 aaKnown RBP eCLIP22.78■■□□□ 1.24
CCDC78-206ENST00000463539 GPR101Q96P66 508 aaPredicted RBP22.78■■□□□ 1.24
CCDC78-206ENST00000463539 PUS7LQ9H0K6 701 aaKnown RBP22.78■■□□□ 1.24
CCDC78-206ENST00000463539 U3KPZ7 1027 aaPredicted RBP22.78■■□□□ 1.24
CCDC78-206ENST00000463539 CHRNA5P30532 468 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 CREB3L3Q68CJ9 461 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 MAGEB6Q8N7X4 407 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 KCNB2Q92953 911 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 DSCC1Q9BVC3 393 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 ABCF2Q9UG63 623 aa22.78■■□□□ 1.24
CCDC78-206ENST00000463539 TCRBV5S4A2TA0A5A2 114 aa22.77■■□□□ 1.24
CCDC78-206ENST00000463539 C6orf229H3BNL8 230 aa22.77■■□□□ 1.24
CCDC78-206ENST00000463539 POLLQ9UGP5 575 aa22.77■■□□□ 1.24
CCDC78-206ENST00000463539 CD2BP2O95400 341 aaKnown RBP22.76■■□□□ 1.23
CCDC78-206ENST00000463539 VPS53Q5VIR6 699 aa22.76■■□□□ 1.23
CCDC78-206ENST00000463539 CNKSR1Q969H4 720 aa22.76■■□□□ 1.23
CCDC78-206ENST00000463539 SLC27A2O14975 620 aa22.75■■□□□ 1.23
CCDC78-206ENST00000463539 GPAA1O43292 621 aa22.75■■□□□ 1.23
CCDC78-206ENST00000463539 HSPD1P10809 573 aaKnown RBP22.75■■□□□ 1.23
CCDC78-206ENST00000463539 NEK4P51957 841 aa22.75■■□□□ 1.23
CCDC78-206ENST00000463539 ZBTB7AO95365 584 aa22.75■■□□□ 1.23
CCDC78-206ENST00000463539 CHAF1AQ13111 956 aaPredicted RBP22.75■■□□□ 1.23
CCDC78-206ENST00000463539 MPNDQ8N594 471 aa22.75■■□□□ 1.23
CCDC78-206ENST00000463539 RAI14Q9P0K7 980 aa22.75■■□□□ 1.23
CCDC78-206ENST00000463539 LTBP1Q14766 1721 aa22.74■■□□□ 1.23
CCDC78-206ENST00000463539 OLFM4Q6UX06 510 aa22.74■■□□□ 1.23
CCDC78-206ENST00000463539 DPP8Q6V1X1 898 aaPredicted RBP22.74■■□□□ 1.23
CCDC78-206ENST00000463539 DOCK2Q92608 1830 aa22.74■■□□□ 1.23
CCDC78-206ENST00000463539 TDRD7Q8NHU6 1098 aaKnown RBP22.73■■□□□ 1.23
CCDC78-206ENST00000463539 UPF3BQ9BZI7 483 aaKnown RBP22.73■■□□□ 1.23
CCDC78-206ENST00000463539 K7ELQ4 463 aaPredicted RBP22.73■■□□□ 1.23
CCDC78-206ENST00000463539 IL27Q8NEV9 243 aa22.73■■□□□ 1.23
CCDC78-206ENST00000463539 AIDAQ96BJ3 306 aa22.73■■□□□ 1.23
CCDC78-206ENST00000463539 MTFR1LQ9H019 292 aa22.73■■□□□ 1.23
CCDC78-206ENST00000463539 MYH7P12883 1935 aa22.72■■□□□ 1.23
CCDC78-206ENST00000463539 R3HDM1Q15032 1099 aaKnown RBP22.72■■□□□ 1.23
CCDC78-206ENST00000463539 CD209Q9NNX6 404 aa22.72■■□□□ 1.23
CCDC78-206ENST00000463539 POLD1P28340 1107 aa22.71■■□□□ 1.23
CCDC78-206ENST00000463539 ERICH6Q7L0X2 663 aa22.71■■□□□ 1.23
CCDC78-206ENST00000463539 WDR66Q8TBY9 1149 aa22.71■■□□□ 1.23
CCDC78-206ENST00000463539 JAKMIP1Q96N16 626 aaKnown RBP22.71■■□□□ 1.23
CCDC78-206ENST00000463539 ZGPATQ8N5A5 531 aaKnown RBP22.71■■□□□ 1.23
CCDC78-206ENST00000463539 TM6SF1Q9BZW5 370 aa22.71■■□□□ 1.23
CCDC78-206ENST00000463539 JAG2Q9Y219 1238 aa22.71■■□□□ 1.23
CCDC78-206ENST00000463539 DUOX1Q9NRD9 1551 aa22.7■■□□□ 1.22
CCDC78-206ENST00000463539 IL1R1P14778 569 aa22.7■■□□□ 1.22
CCDC78-206ENST00000463539 CASTP20810 708 aaKnown RBP22.7■■□□□ 1.22
CCDC78-206ENST00000463539 CYP7A1P22680 504 aa22.7■■□□□ 1.22
CCDC78-206ENST00000463539 ADCK5Q3MIX3 580 aa22.7■■□□□ 1.22
CCDC78-206ENST00000463539 TSGA10IPQ3SY00 556 aa22.7■■□□□ 1.22
CCDC78-206ENST00000463539 SALL1Q9NSC2 1324 aa22.7■■□□□ 1.22
CCDC78-206ENST00000463539 FOXP2O15409 715 aa22.69■■□□□ 1.22
CCDC78-206ENST00000463539 MBD4O95243 580 aa22.69■■□□□ 1.22
CCDC78-206ENST00000463539 KRT32Q14532 448 aa22.69■■□□□ 1.22
CCDC78-206ENST00000463539 SPTY2D1Q68D10 685 aaPredicted RBP22.69■■□□□ 1.22
CCDC78-206ENST00000463539 CTNNA3Q9UI47 895 aa22.69■■□□□ 1.22
CCDC78-206ENST00000463539 ATF5Q9Y2D1 282 aaPredicted RBP22.69■■□□□ 1.22
CCDC78-206ENST00000463539 RPAP1Q9BWH6 1393 aaPredicted RBP22.69■■□□□ 1.22
CCDC78-206ENST00000463539 CYP21A2P08686 494 aa22.68■■□□□ 1.22
CCDC78-206ENST00000463539 PSMA5P28066 241 aa22.68■■□□□ 1.22
CCDC78-206ENST00000463539 MCM2P49736 904 aa22.68■■□□□ 1.22
CCDC78-206ENST00000463539 NAA16Q6N069 864 aaPredicted RBP22.68■■□□□ 1.22
CCDC78-206ENST00000463539 STRBPQ96SI9 672 aaKnown RBP22.68■■□□□ 1.22
CCDC78-206ENST00000463539 ZC3H12CQ9C0D7 883 aaKnown RBP22.68■■□□□ 1.22
CCDC78-206ENST00000463539 MYO5AQ9Y4I1 1855 aaKnown RBP22.68■■□□□ 1.22
CCDC78-206ENST00000463539 RIMBP2O15034 1052 aa22.68■■□□□ 1.22
CCDC78-206ENST00000463539 EYA3Q99504 573 aa22.68■■□□□ 1.22
CCDC78-206ENST00000463539 ZSWIM6Q9HCJ5 1215 aa22.68■■□□□ 1.22
CCDC78-206ENST00000463539 ZNF219Q9P2Y4 722 aaPredicted RBP22.68■■□□□ 1.22
CCDC78-206ENST00000463539 TAF6LQ9Y6J9 622 aa22.68■■□□□ 1.22
CCDC78-206ENST00000463539 PRDX5P30044 214 aa22.67■■□□□ 1.22
CCDC78-206ENST00000463539 MECOMQ03112 1051 aa22.67■■□□□ 1.22
CCDC78-206ENST00000463539 TMED8Q6PL24 325 aaPredicted RBP22.67■■□□□ 1.22
CCDC78-206ENST00000463539 NSUN4Q96CB9 384 aaKnown RBP22.67■■□□□ 1.22
CCDC78-206ENST00000463539 COA1Q9GZY4 146 aa22.67■■□□□ 1.22
CCDC78-206ENST00000463539 ARMT1Q9H993 441 aa22.67■■□□□ 1.22
CCDC78-206ENST00000463539 CYP46A1Q9Y6A2 500 aa22.67■■□□□ 1.22
CCDC78-206ENST00000463539 IGSF3O75054 1194 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms