RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 A0A0D9SFI3 127 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 RNF113AO15541 343 aaKnown RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 FIBPO43427 364 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 NEMFO60524 1076 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 PFKFB2O60825 505 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 KDM4AO75164 1064 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 CDKL5O76039 1030 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 PCCAP05165 728 aaPredicted RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 PRR29P0C7W0 189 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 HMGB2P26583 209 aaKnown RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 EVCP57679 992 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 CHAF1AQ13111 956 aaPredicted RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 SLC39A6Q13433 755 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 TCIRG1Q13488 830 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 ITPK1Q13572 414 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 ADCK5Q3MIX3 580 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 ZMYM1Q5SVZ6 1142 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 GORABQ5T7V8 394 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 CPLX2Q6PUV4 134 aaKnown RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 LMBR1LQ6UX01 489 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 LINC00116Q8NCU8 138 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 FLAD1Q8NFF5 587 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 SMARCC2Q8TAQ2 1214 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 SMARCC1Q92922 1105 aaPredicted RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 SYTL4Q96C24 671 aaPredicted RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 SPATA32Q96LK8 384 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 FAM227BQ96M60 508 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 NOL10Q9BSC4 688 aaKnown RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 AGXT2Q9BYV1 514 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 NAT10Q9H0A0 1025 aaKnown RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 SIL1Q9H173 461 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 IL25Q9H293 177 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 RBM27Q9P2N5 1060 aaKnown RBP5.52□□□□□ -1.53
VPS72-203ENST00000463470 TPCN1Q9ULQ1 816 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 CNPY2Q9Y2B0 182 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 CD2APQ9Y5K6 639 aa5.52□□□□□ -1.53
VPS72-203ENST00000463470 LOC102724428A0A0B4J2F2 783 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 PRAMEF22A3QJZ6 481 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 DYNC1I1O14576 645 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 SEMA3EO15041 775 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 NRDCO43847 1150 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 IGSF3O75054 1194 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 IFIT1P09914 478 aaKnown RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 POLD1P28340 1107 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 SIK1P57059 783 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 FOXO4P98177 505 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 DNM1Q05193 864 aaKnown RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 TRDNQ13061 729 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 IFIT5Q13325 482 aaKnown RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 TOB2Q14106 344 aaPredicted RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 IMMTQ16891 758 aaKnown RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 TAF7LQ5H9L4 462 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 FOXD4L5Q5VV16 416 aaPredicted RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 SASS6Q6UVJ0 657 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 CCDC73Q6ZRK6 1079 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 RBM43Q6ZSC3 357 aaKnown RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 ZBTB38Q8NAP3 1195 aaPredicted RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 SPDYE1Q8NFV5 336 aaPredicted RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 FOXD4L4Q8WXT5 416 aaPredicted RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 PIBF1Q8WXW3 757 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 ARHGEF1Q92888 912 aaKnown RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 NEUROD6Q96NK8 337 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 DNAJC2Q99543 621 aaKnown RBP5.51□□□□□ -1.53
VPS72-203ENST00000463470 MTA3Q9BTC8 594 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 ISCA1Q9BUE6 129 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 TNMDQ9H2S6 317 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 TMOD3Q9NYL9 352 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 ASAP1Q9ULH1 1129 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 CARMIL3Q8ND23 1372 aa5.51□□□□□ -1.53
VPS72-203ENST00000463470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.5□□□□□ -1.53
VPS72-203ENST00000463470 ERVV-1B6SEH8 477 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 MYO1BO43795 1136 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 GADD45BO75293 160 aaPredicted RBP5.5□□□□□ -1.53
VPS72-203ENST00000463470 ADCY5O95622 1261 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 TUBB4AP04350 444 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 CSF1RP07333 972 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 CYP21A2P08686 494 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 UQCRFS1P1P0C7P4 283 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 NT5C2P49902 561 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 C1QTNF8P60827 252 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 TPM4P67936 248 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 EXOSC10Q01780 885 aaKnown RBP5.5□□□□□ -1.53
VPS72-203ENST00000463470 HSP90AA2PQ14568 343 aaPredicted RBP5.5□□□□□ -1.53
VPS72-203ENST00000463470 ZRSR1Q15695 479 aaKnown RBP5.5□□□□□ -1.53
VPS72-203ENST00000463470 EPHA10Q5JZY3 1008 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 TTC39AQ5SRH9 613 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 Q6ZUG5 572 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 ATG9AQ7Z3C6 839 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 BRAPQ7Z569 592 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 RALYLQ86SE5 291 aaKnown RBP5.5□□□□□ -1.53
VPS72-203ENST00000463470 JMYQ8N9B5 988 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 RNF214Q8ND24 703 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 NCOA7Q8NI08 942 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 BICD2Q8TD16 824 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 APPBP2Q92624 585 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 DBNDD2Q9BQY9 259 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 FUCA2Q9BTY2 467 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 PDCL3Q9H2J4 239 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 CLSTN2Q9H4D0 955 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 CREBZFQ9NS37 354 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms