RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 AGBL3Q8NEM8 1001 aa20.59■□□□□ 0.89
HLA-DPA1-245ENST00000463066 RBM46Q8TBY0 533 aaKnown RBP20.59■□□□□ 0.89
HLA-DPA1-245ENST00000463066 ADARB2Q9NS39 739 aaKnown RBP20.59■□□□□ 0.89
HLA-DPA1-245ENST00000463066 CLEC11AQ9Y240 323 aa20.59■□□□□ 0.89
HLA-DPA1-245ENST00000463066 SCN4AP35499 1836 aa20.59■□□□□ 0.89
HLA-DPA1-245ENST00000463066 FAM205AQ6ZU69 1335 aa20.58■□□□□ 0.89
HLA-DPA1-245ENST00000463066 H7C1D1 291 aa20.58■□□□□ 0.89
HLA-DPA1-245ENST00000463066 HMMRO75330 724 aa20.58■□□□□ 0.89
HLA-DPA1-245ENST00000463066 TNNI3KQ59H18 835 aa20.58■□□□□ 0.89
HLA-DPA1-245ENST00000463066 KIAA0825Q8IV33 1275 aa20.58■□□□□ 0.89
HLA-DPA1-245ENST00000463066 AKAP2Q9Y2D5 859 aa20.58■□□□□ 0.89
HLA-DPA1-245ENST00000463066 FPGT-TNNI3KV9GXZ4 949 aa20.58■□□□□ 0.89
HLA-DPA1-245ENST00000463066 ASTN2O75129 1339 aaPredicted RBP20.57■□□□□ 0.88
HLA-DPA1-245ENST00000463066 F8W031 263 aaPredicted RBP20.57■□□□□ 0.88
HLA-DPA1-245ENST00000463066 USP17L8P0C7I0 530 aa20.57■□□□□ 0.88
HLA-DPA1-245ENST00000463066 CCDC102BQ68D86 513 aa20.57■□□□□ 0.88
HLA-DPA1-245ENST00000463066 DBNDD2Q9BQY9 259 aa20.57■□□□□ 0.88
HLA-DPA1-245ENST00000463066 IL1RAPL2Q9NP60 686 aa20.57■□□□□ 0.88
HLA-DPA1-245ENST00000463066 TLR7Q9NYK1 1049 aaKnown RBP20.57■□□□□ 0.88
HLA-DPA1-245ENST00000463066 PSME4Q14997 1843 aa20.57■□□□□ 0.88
HLA-DPA1-245ENST00000463066 FRAT2O75474 233 aaPredicted RBP20.56■□□□□ 0.88
HLA-DPA1-245ENST00000463066 ZNF280AP59817 542 aaPredicted RBP20.56■□□□□ 0.88
HLA-DPA1-245ENST00000463066 MAP1SQ66K74 1059 aaPredicted RBP20.56■□□□□ 0.88
HLA-DPA1-245ENST00000463066 CHADLQ6NUI6 762 aa20.56■□□□□ 0.88
HLA-DPA1-245ENST00000463066 PNMA8AQ86V59 439 aaPredicted RBP20.56■□□□□ 0.88
HLA-DPA1-245ENST00000463066 LDHDQ86WU2 507 aa20.56■□□□□ 0.88
HLA-DPA1-245ENST00000463066 EAF2Q96CJ1 260 aaPredicted RBP20.56■□□□□ 0.88
HLA-DPA1-245ENST00000463066 BCL11AQ9H165 835 aa20.56■□□□□ 0.88
HLA-DPA1-245ENST00000463066 MFSD14BQ5SR56 506 aa20.55■□□□□ 0.88
HLA-DPA1-245ENST00000463066 USP50Q70EL3 339 aaPredicted RBP20.55■□□□□ 0.88
HLA-DPA1-245ENST00000463066 SMC1BQ8NDV3 1235 aa20.55■□□□□ 0.88
HLA-DPA1-245ENST00000463066 RHPN1Q8TCX5 695 aa20.55■□□□□ 0.88
HLA-DPA1-245ENST00000463066 CCDC8Q9H0W5 538 aaPredicted RBP20.55■□□□□ 0.88
HLA-DPA1-245ENST00000463066 GPR108Q9NPR9 543 aa20.55■□□□□ 0.88
HLA-DPA1-245ENST00000463066 PCDHAC2Q9Y5I4 1007 aa20.55■□□□□ 0.88
HLA-DPA1-245ENST00000463066 ADAMTSL1Q8N6G6 1762 aa20.54■□□□□ 0.88
HLA-DPA1-245ENST00000463066 KIF4BQ2VIQ3 1234 aa20.54■□□□□ 0.88
HLA-DPA1-245ENST00000463066 DBNLQ9UJU6 430 aaKnown RBP20.54■□□□□ 0.88
HLA-DPA1-245ENST00000463066 MYO3BQ8WXR4 1341 aa20.53■□□□□ 0.88
HLA-DPA1-245ENST00000463066 ARAP2Q8WZ64 1704 aa20.53■□□□□ 0.88
HLA-DPA1-245ENST00000463066 FMR1Q06787 632 aaKnown RBP eCLIP20.53■□□□□ 0.88
HLA-DPA1-245ENST00000463066 RASGRF1Q13972 1273 aa20.53■□□□□ 0.88
HLA-DPA1-245ENST00000463066 SCARF1Q14162 830 aa20.53■□□□□ 0.88
HLA-DPA1-245ENST00000463066 MYOZ2Q9NPC6 264 aa20.53■□□□□ 0.88
HLA-DPA1-245ENST00000463066 SMARCA5O60264 1052 aaPredicted RBP20.52■□□□□ 0.88
HLA-DPA1-245ENST00000463066 FKBP1AP62942 108 aaKnown RBP20.52■□□□□ 0.88
HLA-DPA1-245ENST00000463066 GORABQ5T7V8 394 aa20.52■□□□□ 0.88
HLA-DPA1-245ENST00000463066 PI16Q6UXB8 463 aa20.52■□□□□ 0.88
HLA-DPA1-245ENST00000463066 DLK2Q6UY11 383 aa20.52■□□□□ 0.88
HLA-DPA1-245ENST00000463066 ERC1Q8IUD2 1116 aa20.52■□□□□ 0.88
HLA-DPA1-245ENST00000463066 AOX1Q06278 1338 aa20.52■□□□□ 0.87
HLA-DPA1-245ENST00000463066 FSTL1Q12841 308 aa20.51■□□□□ 0.87
HLA-DPA1-245ENST00000463066 HSP90AB4PQ58FF6 505 aa20.51■□□□□ 0.87
HLA-DPA1-245ENST00000463066 AACSQ86V21 672 aa20.51■□□□□ 0.87
HLA-DPA1-245ENST00000463066 GNL3LQ9NVN8 582 aaKnown RBP20.51■□□□□ 0.87
HLA-DPA1-245ENST00000463066 NBPF9Q3BBW0 867 aa20.5■□□□□ 0.87
HLA-DPA1-245ENST00000463066 KIF1BPQ96EK5 621 aa20.5■□□□□ 0.87
HLA-DPA1-245ENST00000463066 DCTPP1Q9H773 170 aa20.5■□□□□ 0.87
HLA-DPA1-245ENST00000463066 HMG20BQ9P0W2 317 aa20.5■□□□□ 0.87
HLA-DPA1-245ENST00000463066 TTF2Q9UNY4 1162 aaKnown RBP20.5■□□□□ 0.87
HLA-DPA1-245ENST00000463066 SCAF8Q9UPN6 1271 aaKnown RBP20.5■□□□□ 0.87
HLA-DPA1-245ENST00000463066 TRAF5O00463 557 aa20.49■□□□□ 0.87
HLA-DPA1-245ENST00000463066 RAB11FIP3O75154 756 aa20.49■□□□□ 0.87
HLA-DPA1-245ENST00000463066 ITGBL1O95965 494 aaPredicted RBP20.49■□□□□ 0.87
HLA-DPA1-245ENST00000463066 CNTROBQ8N137 903 aa20.49■□□□□ 0.87
HLA-DPA1-245ENST00000463066 OGFOD1Q8N543 542 aa20.49■□□□□ 0.87
HLA-DPA1-245ENST00000463066 GLIS2Q9BZE0 524 aaPredicted RBP20.49■□□□□ 0.87
HLA-DPA1-245ENST00000463066 SNRKQ9NRH2 765 aa20.49■□□□□ 0.87
HLA-DPA1-245ENST00000463066 PGAP2Q9UHJ9 254 aa20.49■□□□□ 0.87
HLA-DPA1-245ENST00000463066 DENND2AQ9ULE3 1009 aa20.49■□□□□ 0.87
HLA-DPA1-245ENST00000463066 CFAP100Q494V2 611 aa20.48■□□□□ 0.87
HLA-DPA1-245ENST00000463066 ZBED3Q96IU2 234 aaPredicted RBP20.48■□□□□ 0.87
HLA-DPA1-245ENST00000463066 GGA3Q9NZ52 723 aa20.48■□□□□ 0.87
HLA-DPA1-245ENST00000463066 HDAC9Q9UKV0 1011 aa20.48■□□□□ 0.87
HLA-DPA1-245ENST00000463066 WNT10BO00744 389 aa20.47■□□□□ 0.87
HLA-DPA1-245ENST00000463066 SEMA3EO15041 775 aa20.47■□□□□ 0.87
HLA-DPA1-245ENST00000463066 ARID4AP29374 1257 aaPredicted RBP20.47■□□□□ 0.87
HLA-DPA1-245ENST00000463066 PRDX5P30044 214 aa20.47■□□□□ 0.87
HLA-DPA1-245ENST00000463066 MCAMP43121 646 aa20.47■□□□□ 0.87
HLA-DPA1-245ENST00000463066 TTC39AQ5SRH9 613 aa20.47■□□□□ 0.87
HLA-DPA1-245ENST00000463066 WDR66Q8TBY9 1149 aa20.47■□□□□ 0.87
HLA-DPA1-245ENST00000463066 TBC1D22AQ8WUA7 517 aa20.47■□□□□ 0.87
HLA-DPA1-245ENST00000463066 ADM5C9JUS6 153 aa20.46■□□□□ 0.87
HLA-DPA1-245ENST00000463066 HTRA3P83110 453 aa20.46■□□□□ 0.87
HLA-DPA1-245ENST00000463066 ANGEL2Q5VTE6 544 aaKnown RBP20.46■□□□□ 0.87
HLA-DPA1-245ENST00000463066 TBC1D9Q6ZT07 1266 aa20.46■□□□□ 0.87
HLA-DPA1-245ENST00000463066 USP48Q86UV5 1035 aa20.46■□□□□ 0.87
HLA-DPA1-245ENST00000463066 UQCRFS1P1P0C7P4 283 aa20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 DLGAP5Q15398 846 aa20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 CCDC158Q5M9N0 1113 aa20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 CLASRPQ8N2M8 674 aaKnown RBP20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 SPATA5Q8NB90 893 aa20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 ZC3H15Q8WU90 426 aaKnown RBP20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 PRMT6Q96LA8 375 aaPredicted RBP20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 LRRCC1Q9C099 1032 aa20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 NDUFB9Q9Y6M9 179 aa20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 PASKQ96RG2 1323 aa20.45■□□□□ 0.86
HLA-DPA1-245ENST00000463066 HSPA6P17066 643 aa20.44■□□□□ 0.86
HLA-DPA1-245ENST00000463066 CRKP46108 304 aa20.44■□□□□ 0.86
HLA-DPA1-245ENST00000463066 RBM5P52756 815 aaKnown RBP eCLIP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms