RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TNFRSF21O75509 655 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 PSAPP07602 524 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 EPXP11678 715 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 TMCO4Q5TGY1 634 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 HFE2Q6ZVN8 426 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 SVOPQ8N4V2 548 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 MDFIQ99750 246 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 BCORL1Q5H9F3 1711 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 RTEL1-TNFRSF6BF6WH68 1400 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 ANKRD50Q9ULJ7 1429 aa10.57□□□□□ -0.72
UBE4B-204ENST00000462658 ADH7P40394 386 aa10.56□□□□□ -0.72
UBE4B-204ENST00000462658 COL13A1Q5TAT6 717 aaPredicted RBP10.56□□□□□ -0.72
UBE4B-204ENST00000462658 OR13H1Q8NG92 308 aa10.56□□□□□ -0.72
UBE4B-204ENST00000462658 ASB16Q96NS5 453 aa10.56□□□□□ -0.72
UBE4B-204ENST00000462658 NSUN5Q96P11 429 aaKnown RBP10.56□□□□□ -0.72
UBE4B-204ENST00000462658 CHRDQ9H2X0 955 aa10.56□□□□□ -0.72
UBE4B-204ENST00000462658 KANSL3Q9P2N6 904 aa10.56□□□□□ -0.72
UBE4B-204ENST00000462658 SLC6A14Q9UN76 642 aa10.56□□□□□ -0.72
UBE4B-204ENST00000462658 ABCA6Q8N139 1617 aa10.55□□□□□ -0.72
UBE4B-204ENST00000462658 ELOA3CA0A087WX78 387 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-204ENST00000462658 ELOA3DA6NLF2 546 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-204ENST00000462658 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
UBE4B-204ENST00000462658 ORC1Q13415 861 aa10.55□□□□□ -0.72
UBE4B-204ENST00000462658 ELOA3BQ3SY89 546 aa10.55□□□□□ -0.72
UBE4B-204ENST00000462658 ZSCAN1Q8NBB4 408 aa10.55□□□□□ -0.72
UBE4B-204ENST00000462658 ELOA3Q8NG57 546 aa10.55□□□□□ -0.72
UBE4B-204ENST00000462658 DMRTB1Q96MA1 342 aa10.55□□□□□ -0.72
UBE4B-204ENST00000462658 ZFYVE16Q7Z3T8 1539 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 J3QW42 95 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 PHACTR2O75167 634 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 PLAURQ03405 335 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 ZSCAN29Q8IWY8 852 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-204ENST00000462658 TRPM4Q8TD43 1214 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 SNX29Q8TEQ0 813 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 MPHOSPH9Q99550 1183 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 DIP2CQ9Y2E4 1556 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 KIDINS220Q9ULH0 1771 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 MADDQ8WXG6 1647 aa10.54□□□□□ -0.72
UBE4B-204ENST00000462658 EREGO14944 169 aa10.53□□□□□ -0.72
UBE4B-204ENST00000462658 CPB1P15086 417 aa10.53□□□□□ -0.72
UBE4B-204ENST00000462658 NRLP54845 237 aa10.53□□□□□ -0.72
UBE4B-204ENST00000462658 GPLD1P80108 840 aa10.53□□□□□ -0.72
UBE4B-204ENST00000462658 MAP3K10Q02779 954 aa10.53□□□□□ -0.72
UBE4B-204ENST00000462658 USPL1Q5W0Q7 1092 aa10.53□□□□□ -0.72
UBE4B-204ENST00000462658 DNAJC14Q6Y2X3 702 aaPredicted RBP10.53□□□□□ -0.72
UBE4B-204ENST00000462658 NAGPAQ9UK23 515 aa10.53□□□□□ -0.72
UBE4B-204ENST00000462658 ZNF518AQ6AHZ1 1483 aa10.53□□□□□ -0.72
UBE4B-204ENST00000462658 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 TREHO43280 583 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 POLR3DP05423 398 aaPredicted RBP10.52□□□□□ -0.73
UBE4B-204ENST00000462658 CES1P23141 567 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 SOX18P35713 384 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 FAM35AQ86V20 835 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 BTBD6Q96KE9 485 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 ZFYVE28Q9HCC9 887 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 DUOX2Q9NRD8 1548 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 PLXNC1O60486 1568 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 HECW2Q9P2P5 1572 aa10.52□□□□□ -0.73
UBE4B-204ENST00000462658 LOC102724428A0A0B4J2F2 783 aa10.51□□□□□ -0.73
UBE4B-204ENST00000462658 ANKRD33BA6NCL7 494 aa10.51□□□□□ -0.73
UBE4B-204ENST00000462658 ALAS2P22557 587 aa10.51□□□□□ -0.73
UBE4B-204ENST00000462658 SIK1P57059 783 aa10.51□□□□□ -0.73
UBE4B-204ENST00000462658 DSC3Q14574 896 aa10.51□□□□□ -0.73
UBE4B-204ENST00000462658 STARD13Q9Y3M8 1113 aa10.51□□□□□ -0.73
UBE4B-204ENST00000462658 NUP155O75694 1391 aa10.51□□□□□ -0.73
UBE4B-204ENST00000462658 MAGI2Q86UL8 1455 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 ATP7AQ04656 1500 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 ARHGEF15O94989 841 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 AMPD1P23109 780 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 MFAP1P55081 439 aaKnown RBP10.5□□□□□ -0.73
UBE4B-204ENST00000462658 INSM1Q01101 510 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-204ENST00000462658 PLCB3Q01970 1234 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 HYAL2Q12891 473 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 CHSY3Q70JA7 882 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 NEDD1Q8NHV4 660 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 ALKBH8Q96BT7 664 aaKnown RBP10.5□□□□□ -0.73
UBE4B-204ENST00000462658 SIN3AQ96ST3 1273 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 ERBINQ96RT1 1412 aa10.5□□□□□ -0.73
UBE4B-204ENST00000462658 MLH3Q9UHC1 1453 aa10.49□□□□□ -0.73
UBE4B-204ENST00000462658 INO80Q9ULG1 1556 aaPredicted RBP10.49□□□□□ -0.73
UBE4B-204ENST00000462658 EIF1AYO14602 144 aaKnown RBP10.49□□□□□ -0.73
UBE4B-204ENST00000462658 HOXD8P13378 290 aaPredicted RBP10.49□□□□□ -0.73
UBE4B-204ENST00000462658 ACPPP15309 386 aa10.49□□□□□ -0.73
UBE4B-204ENST00000462658 EIF2AK2P19525 551 aaKnown RBP10.49□□□□□ -0.73
UBE4B-204ENST00000462658 NUDT8Q8WV74 236 aa10.49□□□□□ -0.73
UBE4B-204ENST00000462658 LRRC4BQ9NT99 713 aa10.49□□□□□ -0.73
UBE4B-204ENST00000462658 SALL4Q9UJQ4 1053 aa10.49□□□□□ -0.73
UBE4B-204ENST00000462658 RIMS1Q86UR5 1692 aaKnown RBP10.49□□□□□ -0.73
UBE4B-204ENST00000462658 PZPP20742 1482 aa10.49□□□□□ -0.73
UBE4B-204ENST00000462658 REREQ9P2R6 1566 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 ALBP02768 609 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 MAPK8P45983 427 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 PCSK7Q16549 785 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 PERM1Q5SV97 790 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 PSAPL1Q6NUJ1 521 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 C8orf86Q6ZUL3 223 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 NCAPG2Q86XI2 1143 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 CSRNP1Q96S65 589 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
UBE4B-204ENST00000462658 DHX29Q7Z478 1369 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms