RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 A0A1B0GUL6 1792 aa17.28■□□□□ 0.36
RBM39-222ENST00000461849 ZNF157P51786 506 aaPredicted RBP17.27■□□□□ 0.36
RBM39-222ENST00000461849 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
RBM39-222ENST00000461849 NOGQ13253 232 aa17.27■□□□□ 0.36
RBM39-222ENST00000461849 VPS37DQ86XT2 251 aa17.27■□□□□ 0.36
RBM39-222ENST00000461849 CCDC102AQ96A19 550 aa17.27■□□□□ 0.36
RBM39-222ENST00000461849 PUS3Q9BZE2 481 aaKnown RBP17.27■□□□□ 0.36
RBM39-222ENST00000461849 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
RBM39-222ENST00000461849 IRS2Q9Y4H2 1338 aa17.26■□□□□ 0.35
RBM39-222ENST00000461849 THSD7BQ9C0I4 1608 aa17.26■□□□□ 0.35
RBM39-222ENST00000461849 SASH1O94885 1247 aa17.26■□□□□ 0.35
RBM39-222ENST00000461849 HIBADHP31937 336 aaKnown RBP17.26■□□□□ 0.35
RBM39-222ENST00000461849 NF2P35240 595 aa17.26■□□□□ 0.35
RBM39-222ENST00000461849 METTL24Q5JXM2 366 aa17.26■□□□□ 0.35
RBM39-222ENST00000461849 ANKRD44Q8N8A2 993 aa17.26■□□□□ 0.35
RBM39-222ENST00000461849 SCAF8Q9UPN6 1271 aaKnown RBP17.26■□□□□ 0.35
RBM39-222ENST00000461849 RIPOR2Q9Y4F9 1068 aa17.26■□□□□ 0.35
RBM39-222ENST00000461849 F8W031 263 aaPredicted RBP17.25■□□□□ 0.35
RBM39-222ENST00000461849 HSPA8P11142 646 aaKnown RBP17.25■□□□□ 0.35
RBM39-222ENST00000461849 FKBP1AP62942 108 aaKnown RBP17.25■□□□□ 0.35
RBM39-222ENST00000461849 FKBP1BP68106 108 aa17.25■□□□□ 0.35
RBM39-222ENST00000461849 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
RBM39-222ENST00000461849 DLGAP5Q15398 846 aa17.25■□□□□ 0.35
RBM39-222ENST00000461849 DZIP1LQ8IYY4 767 aaKnown RBP17.25■□□□□ 0.35
RBM39-222ENST00000461849 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
RBM39-222ENST00000461849 JAG2Q9Y219 1238 aa17.25■□□□□ 0.35
RBM39-222ENST00000461849 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
RBM39-222ENST00000461849 CA12O43570 354 aa17.24■□□□□ 0.35
RBM39-222ENST00000461849 MYO1BO43795 1136 aa17.24■□□□□ 0.35
RBM39-222ENST00000461849 CAPN15O75808 1086 aa17.24■□□□□ 0.35
RBM39-222ENST00000461849 UBTFL1P0CB47 393 aaPredicted RBP17.24■□□□□ 0.35
RBM39-222ENST00000461849 GYG1P46976 350 aa17.24■□□□□ 0.35
RBM39-222ENST00000461849 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
RBM39-222ENST00000461849 LRRC24Q50LG9 513 aa17.24■□□□□ 0.35
RBM39-222ENST00000461849 CAVIN4Q5BKX8 364 aa17.24■□□□□ 0.35
RBM39-222ENST00000461849 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
RBM39-222ENST00000461849 APOBEC3FQ8IUX4 373 aaKnown RBP17.24■□□□□ 0.35
RBM39-222ENST00000461849 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
RBM39-222ENST00000461849 RBM5P52756 815 aaKnown RBP eCLIP17.23■□□□□ 0.35
RBM39-222ENST00000461849 CERS5Q8N5B7 392 aa17.23■□□□□ 0.35
RBM39-222ENST00000461849 KLHDC4Q8TBB5 520 aa17.23■□□□□ 0.35
RBM39-222ENST00000461849 PDE8BO95263 885 aa17.22■□□□□ 0.35
RBM39-222ENST00000461849 PRAMEF18Q5VWM3 479 aa17.22■□□□□ 0.35
RBM39-222ENST00000461849 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
RBM39-222ENST00000461849 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
RBM39-222ENST00000461849 FAM84BQ96KN1 310 aaPredicted RBP17.22■□□□□ 0.35
RBM39-222ENST00000461849 SUPT16HQ9Y5B9 1047 aaKnown RBP17.22■□□□□ 0.35
RBM39-222ENST00000461849 CFAP100Q494V2 611 aa17.21■□□□□ 0.35
RBM39-222ENST00000461849 MFSD14BQ5SR56 506 aa17.21■□□□□ 0.35
RBM39-222ENST00000461849 TSKSQ9UJT2 592 aa17.21■□□□□ 0.35
RBM39-222ENST00000461849 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.34
RBM39-222ENST00000461849 FAM155AB1AL88 458 aaPredicted RBP17.2■□□□□ 0.34
RBM39-222ENST00000461849 IFIT1P09914 478 aaKnown RBP17.2■□□□□ 0.34
RBM39-222ENST00000461849 MTMR14Q8NCE2 650 aa17.2■□□□□ 0.34
RBM39-222ENST00000461849 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
RBM39-222ENST00000461849 ZBED3Q96IU2 234 aaPredicted RBP17.2■□□□□ 0.34
RBM39-222ENST00000461849 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
RBM39-222ENST00000461849 PAPPA2Q9BXP8 1791 aa17.2■□□□□ 0.34
RBM39-222ENST00000461849 EYA2O00167 538 aa17.19■□□□□ 0.34
RBM39-222ENST00000461849 SLC10A3P09131 477 aa17.19■□□□□ 0.34
RBM39-222ENST00000461849 RLBP1P12271 317 aa17.19■□□□□ 0.34
RBM39-222ENST00000461849 KIF23Q02241 960 aaPredicted RBP17.19■□□□□ 0.34
RBM39-222ENST00000461849 PUM3Q15397 648 aaKnown RBP17.19■□□□□ 0.34
RBM39-222ENST00000461849 TMEM57Q8N5G2 664 aa17.19■□□□□ 0.34
RBM39-222ENST00000461849 ZIC5Q96T25 663 aa17.19■□□□□ 0.34
RBM39-222ENST00000461849 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
RBM39-222ENST00000461849 TTF2Q9UNY4 1162 aaKnown RBP17.19■□□□□ 0.34
RBM39-222ENST00000461849 SPDYE2BA6NHP3 402 aa17.18■□□□□ 0.34
RBM39-222ENST00000461849 UBE2Q2LH0YL09 131 aa17.18■□□□□ 0.34
RBM39-222ENST00000461849 SPDYE6P0CI01 402 aa17.18■□□□□ 0.34
RBM39-222ENST00000461849 PTPN12Q05209 780 aaKnown RBP17.18■□□□□ 0.34
RBM39-222ENST00000461849 CHAF1AQ13111 956 aaPredicted RBP17.18■□□□□ 0.34
RBM39-222ENST00000461849 ARMC9Q7Z3E5 817 aa17.18■□□□□ 0.34
RBM39-222ENST00000461849 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
RBM39-222ENST00000461849 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
RBM39-222ENST00000461849 VGLL2Q8N8G2 317 aa17.18■□□□□ 0.34
RBM39-222ENST00000461849 PANK1Q8TE04 598 aa17.18■□□□□ 0.34
RBM39-222ENST00000461849 TBC1D22AQ8WUA7 517 aa17.18■□□□□ 0.34
RBM39-222ENST00000461849 DEFB129Q9H1M3 183 aa17.18■□□□□ 0.34
RBM39-222ENST00000461849 IQSEC3Q9UPP2 1182 aaPredicted RBP17.18■□□□□ 0.34
RBM39-222ENST00000461849 COL1A1P02452 1464 aaPredicted RBP17.18■□□□□ 0.34
RBM39-222ENST00000461849 CLRN2A0PK11 232 aa17.17■□□□□ 0.34
RBM39-222ENST00000461849 SLC5A1P13866 664 aa17.17■□□□□ 0.34
RBM39-222ENST00000461849 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
RBM39-222ENST00000461849 PRKG1Q13976 671 aa17.17■□□□□ 0.34
RBM39-222ENST00000461849 MOB2Q70IA6 237 aa17.17■□□□□ 0.34
RBM39-222ENST00000461849 RASAL3Q86YV0 1011 aa17.17■□□□□ 0.34
RBM39-222ENST00000461849 PRMT6Q96LA8 375 aaPredicted RBP17.17■□□□□ 0.34
RBM39-222ENST00000461849 SIL1Q9H173 461 aa17.17■□□□□ 0.34
RBM39-222ENST00000461849 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
RBM39-222ENST00000461849 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
RBM39-222ENST00000461849 PPP2R3BQ9Y5P8 575 aa17.17■□□□□ 0.34
RBM39-222ENST00000461849 LRRFIP2Q9Y608 721 aaKnown RBP17.17■□□□□ 0.34
RBM39-222ENST00000461849 GNAI3P08754 354 aa17.16■□□□□ 0.34
RBM39-222ENST00000461849 BCAMP50895 628 aa17.16■□□□□ 0.34
RBM39-222ENST00000461849 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
RBM39-222ENST00000461849 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
RBM39-222ENST00000461849 LPIN2Q92539 896 aa17.16■□□□□ 0.34
RBM39-222ENST00000461849 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
RBM39-222ENST00000461849 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms