RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 LRRCC1Q9C099 1032 aa10.39□□□□□ -0.75
SRRM1-204ENST00000461768 IL1RAPL2Q9NP60 686 aa10.39□□□□□ -0.75
SRRM1-204ENST00000461768 GNL3LQ9NVN8 582 aaKnown RBP10.39□□□□□ -0.75
SRRM1-204ENST00000461768 GPRC5DQ9NZD1 345 aa10.39□□□□□ -0.75
SRRM1-204ENST00000461768 HACL1Q9UJ83 578 aa10.39□□□□□ -0.75
SRRM1-204ENST00000461768 DBNLQ9UJU6 430 aaKnown RBP10.39□□□□□ -0.75
SRRM1-204ENST00000461768 IQSEC3Q9UPP2 1182 aaPredicted RBP10.39□□□□□ -0.75
SRRM1-204ENST00000461768 MYO3BQ8WXR4 1341 aa10.38□□□□□ -0.75
SRRM1-204ENST00000461768 KIF3CO14782 793 aa10.38□□□□□ -0.75
SRRM1-204ENST00000461768 SEMA3EO15041 775 aa10.38□□□□□ -0.75
SRRM1-204ENST00000461768 LMOD1P29536 600 aaPredicted RBP10.38□□□□□ -0.75
SRRM1-204ENST00000461768 AACSQ86V21 672 aa10.38□□□□□ -0.75
SRRM1-204ENST00000461768 CLASRPQ8N2M8 674 aaKnown RBP10.38□□□□□ -0.75
SRRM1-204ENST00000461768 CERS5Q8N5B7 392 aa10.38□□□□□ -0.75
SRRM1-204ENST00000461768 TLR7Q9NYK1 1049 aaKnown RBP10.38□□□□□ -0.75
SRRM1-204ENST00000461768 JAG2Q9Y219 1238 aa10.38□□□□□ -0.75
SRRM1-204ENST00000461768 PDS5AQ29RF7 1337 aaKnown RBP10.37□□□□□ -0.75
SRRM1-204ENST00000461768 SHTN1A0MZ66 631 aa10.37□□□□□ -0.75
SRRM1-204ENST00000461768 FRAT2O75474 233 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-204ENST00000461768 ARID4AP29374 1257 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-204ENST00000461768 EPHX2P34913 555 aa10.37□□□□□ -0.75
SRRM1-204ENST00000461768 EPS15P42566 896 aa10.37□□□□□ -0.75
SRRM1-204ENST00000461768 ZNF280AP59817 542 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-204ENST00000461768 MFSD14BQ5SR56 506 aa10.37□□□□□ -0.75
SRRM1-204ENST00000461768 GORABQ5T7V8 394 aa10.37□□□□□ -0.75
SRRM1-204ENST00000461768 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
SRRM1-204ENST00000461768 GCC1Q96CN9 775 aa10.37□□□□□ -0.75
SRRM1-204ENST00000461768 ZNF512BQ96KM6 892 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-204ENST00000461768 CCDC8Q9H0W5 538 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-204ENST00000461768 RWDD1Q9H446 243 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-204ENST00000461768 TAF1DQ9H5J8 278 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-204ENST00000461768 CNOT7Q9UIV1 285 aaKnown RBP10.37□□□□□ -0.75
SRRM1-204ENST00000461768 DENND2AQ9ULE3 1009 aa10.37□□□□□ -0.75
SRRM1-204ENST00000461768 ADAMTSL1Q8N6G6 1762 aa10.37□□□□□ -0.75
SRRM1-204ENST00000461768 H7C1D1 291 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
SRRM1-204ENST00000461768 IGHDP01880 384 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 USP17L8P0C7I0 530 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 UQCRFS1P1P0C7P4 283 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 MMP14P50281 582 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
SRRM1-204ENST00000461768 RASGRF1Q13972 1273 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 CCDC158Q5M9N0 1113 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 KIAA0825Q8IV33 1275 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 SMC5Q8IY18 1101 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 TBC1D22AQ8WUA7 517 aa10.36□□□□□ -0.75
SRRM1-204ENST00000461768 ADARB2Q9NS39 739 aaKnown RBP10.36□□□□□ -0.75
SRRM1-204ENST00000461768 SALL1Q9NSC2 1324 aa10.35□□□□□ -0.75
SRRM1-204ENST00000461768 AKAP11Q9UKA4 1901 aa10.35□□□□□ -0.75
SRRM1-204ENST00000461768 IFIT2P09913 472 aaKnown RBP10.35□□□□□ -0.75
SRRM1-204ENST00000461768 MCAMP43121 646 aa10.35□□□□□ -0.75
SRRM1-204ENST00000461768 SCARF1Q14162 830 aa10.35□□□□□ -0.75
SRRM1-204ENST00000461768 TTC39AQ5SRH9 613 aa10.35□□□□□ -0.75
SRRM1-204ENST00000461768 PNMA8AQ86V59 439 aaPredicted RBP10.35□□□□□ -0.75
SRRM1-204ENST00000461768 SPATA5Q8NB90 893 aa10.35□□□□□ -0.75
SRRM1-204ENST00000461768 WDR66Q8TBY9 1149 aa10.35□□□□□ -0.75
SRRM1-204ENST00000461768 HMG20BQ9P0W2 317 aa10.35□□□□□ -0.75
SRRM1-204ENST00000461768 EGFRP00533 1210 aa10.34□□□□□ -0.75
SRRM1-204ENST00000461768 GRIK5Q16478 980 aa10.34□□□□□ -0.75
SRRM1-204ENST00000461768 PI16Q6UXB8 463 aa10.34□□□□□ -0.75
SRRM1-204ENST00000461768 USP50Q70EL3 339 aaPredicted RBP10.34□□□□□ -0.75
SRRM1-204ENST00000461768 SAMD7Q7Z3H4 446 aa10.34□□□□□ -0.75
SRRM1-204ENST00000461768 OGFOD1Q8N543 542 aa10.34□□□□□ -0.75
SRRM1-204ENST00000461768 TRPM4Q8TD43 1214 aa10.34□□□□□ -0.75
SRRM1-204ENST00000461768 SUGT1Q9Y2Z0 365 aa10.34□□□□□ -0.75
SRRM1-204ENST00000461768 F8W031 263 aaPredicted RBP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 TOMM70O94826 608 aa10.33□□□□□ -0.76
SRRM1-204ENST00000461768 NEFLP07196 543 aa10.33□□□□□ -0.76
SRRM1-204ENST00000461768 POTEIP0CG38 1075 aa10.33□□□□□ -0.76
SRRM1-204ENST00000461768 POTEJP0CG39 1038 aa10.33□□□□□ -0.76
SRRM1-204ENST00000461768 HIRAP54198 1017 aaPredicted RBP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 TBC1D10BQ4KMP7 808 aaPredicted RBP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 EAPPQ56P03 285 aaPredicted RBP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 LDHDQ86WU2 507 aa10.33□□□□□ -0.76
SRRM1-204ENST00000461768 C16orf71Q8IYS4 520 aaPredicted RBP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 ZGPATQ8N5A5 531 aaKnown RBP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 RBM46Q8TBY0 533 aaKnown RBP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 ZBED3Q96IU2 234 aaPredicted RBP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 BCL11AQ9H165 835 aa10.33□□□□□ -0.76
SRRM1-204ENST00000461768 MYOZ2Q9NPC6 264 aa10.33□□□□□ -0.76
SRRM1-204ENST00000461768 HDAC9Q9UKV0 1011 aa10.33□□□□□ -0.76
SRRM1-204ENST00000461768 TTF2Q9UNY4 1162 aaKnown RBP10.33□□□□□ -0.76
SRRM1-204ENST00000461768 HDLBPQ00341 1268 aaKnown RBP10.32□□□□□ -0.76
SRRM1-204ENST00000461768 KIF4BQ2VIQ3 1234 aa10.32□□□□□ -0.76
SRRM1-204ENST00000461768 RBM26Q5T8P6 1007 aaKnown RBP10.32□□□□□ -0.76
SRRM1-204ENST00000461768 ANKRD45Q5TZF3 282 aa10.32□□□□□ -0.76
SRRM1-204ENST00000461768 MTMR14Q8NCE2 650 aa10.32□□□□□ -0.76
SRRM1-204ENST00000461768 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
SRRM1-204ENST00000461768 SNRKQ9NRH2 765 aa10.32□□□□□ -0.76
SRRM1-204ENST00000461768 PGAP2Q9UHJ9 254 aa10.32□□□□□ -0.76
SRRM1-204ENST00000461768 MAST3O60307 1309 aa10.32□□□□□ -0.76
SRRM1-204ENST00000461768 CYP2E1P05181 493 aaPredicted RBP10.31□□□□□ -0.76
SRRM1-204ENST00000461768 LDHBP07195 334 aaKnown RBP10.31□□□□□ -0.76
SRRM1-204ENST00000461768 ATP5JP18859 108 aa10.31□□□□□ -0.76
SRRM1-204ENST00000461768 PRDX5P30044 214 aa10.31□□□□□ -0.76
SRRM1-204ENST00000461768 NUCB1Q02818 461 aa10.31□□□□□ -0.76
SRRM1-204ENST00000461768 SPTY2D1Q68D10 685 aaPredicted RBP10.31□□□□□ -0.76
SRRM1-204ENST00000461768 B4GALNT3Q6L9W6 998 aa10.31□□□□□ -0.76
SRRM1-204ENST00000461768 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms