RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 CALD1Q05682 793 aaKnown RBP17.65■□□□□ 0.42
PABPC4-208ENST00000461578 CHRNDQ07001 517 aa17.65■□□□□ 0.42
PABPC4-208ENST00000461578 DDX10Q13206 875 aaKnown RBP17.65■□□□□ 0.42
PABPC4-208ENST00000461578 EFCC1Q9HA90 598 aa17.65■□□□□ 0.42
PABPC4-208ENST00000461578 RBBP6Q7Z6E9 1792 aaKnown RBP17.65■□□□□ 0.42
PABPC4-208ENST00000461578 CENPFP49454 3210 aa17.64■□□□□ 0.41
PABPC4-208ENST00000461578 H7C1W4 665 aa17.64■□□□□ 0.41
PABPC4-208ENST00000461578 CFAP100Q494V2 611 aa17.64■□□□□ 0.41
PABPC4-208ENST00000461578 NBPF12Q5TAG4 269 aaPredicted RBP17.64■□□□□ 0.41
PABPC4-208ENST00000461578 JAG2Q9Y219 1238 aa17.64■□□□□ 0.41
PABPC4-208ENST00000461578 AOX1Q06278 1338 aa17.64■□□□□ 0.41
PABPC4-208ENST00000461578 KIAA0100Q14667 2235 aaKnown RBP17.64■□□□□ 0.41
PABPC4-208ENST00000461578 LAMB1P07942 1786 aa17.63■□□□□ 0.41
PABPC4-208ENST00000461578 MYO1BO43795 1136 aa17.63■□□□□ 0.41
PABPC4-208ENST00000461578 TAF5LO75529 589 aa17.63■□□□□ 0.41
PABPC4-208ENST00000461578 IREB2P48200 963 aaKnown RBP17.63■□□□□ 0.41
PABPC4-208ENST00000461578 CAP1Q01518 475 aa17.63■□□□□ 0.41
PABPC4-208ENST00000461578 SUPT20HL1Q3ZLR7 823 aa17.63■□□□□ 0.41
PABPC4-208ENST00000461578 OTUD7BQ6GQQ9 843 aa17.63■□□□□ 0.41
PABPC4-208ENST00000461578 HELBQ8NG08 1087 aaPredicted RBP17.63■□□□□ 0.41
PABPC4-208ENST00000461578 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
PABPC4-208ENST00000461578 PPP2R3BQ9Y5P8 575 aa17.63■□□□□ 0.41
PABPC4-208ENST00000461578 RBM5P52756 815 aaKnown RBP eCLIP17.62■□□□□ 0.419e-10■■■□□ 19.1
PABPC4-208ENST00000461578 SP3Q02447 781 aa17.62■□□□□ 0.41
PABPC4-208ENST00000461578 G2E3Q7L622 706 aa17.62■□□□□ 0.41
PABPC4-208ENST00000461578 ARMC5Q96C12 935 aa17.62■□□□□ 0.41
PABPC4-208ENST00000461578 PRMT6Q96LA8 375 aaPredicted RBP17.62■□□□□ 0.41
PABPC4-208ENST00000461578 PTPN18Q99952 460 aa17.62■□□□□ 0.41
PABPC4-208ENST00000461578 CHMP4AQ9BY43 222 aa17.62■□□□□ 0.41
PABPC4-208ENST00000461578 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
PABPC4-208ENST00000461578 USP2O75604 605 aaPredicted RBP17.61■□□□□ 0.41
PABPC4-208ENST00000461578 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
PABPC4-208ENST00000461578 FXR1P51114 621 aaKnown RBP eCLIP17.61■□□□□ 0.41
PABPC4-208ENST00000461578 MTMR14Q8NCE2 650 aa17.61■□□□□ 0.41
PABPC4-208ENST00000461578 TSR2Q969E8 191 aaKnown RBP17.61■□□□□ 0.41
PABPC4-208ENST00000461578 TMEM106CQ9BVX2 250 aa17.61■□□□□ 0.41
PABPC4-208ENST00000461578 ELP3Q9H9T3 547 aa17.61■□□□□ 0.41
PABPC4-208ENST00000461578 OTOFQ9HC10 1997 aa17.6■□□□□ 0.41
PABPC4-208ENST00000461578 MYCP01106 439 aaPredicted RBP17.6■□□□□ 0.41
PABPC4-208ENST00000461578 GCKRQ14397 625 aa17.6■□□□□ 0.41
PABPC4-208ENST00000461578 ANKRD13AQ8IZ07 590 aa17.6■□□□□ 0.41
PABPC4-208ENST00000461578 PLA2G12BQ9BX93 195 aa17.6■□□□□ 0.41
PABPC4-208ENST00000461578 IRS2Q9Y4H2 1338 aa17.59■□□□□ 0.41
PABPC4-208ENST00000461578 RASA3Q14644 834 aa17.59■□□□□ 0.41
PABPC4-208ENST00000461578 OPTNQ96CV9 577 aa17.59■□□□□ 0.41
PABPC4-208ENST00000461578 BRCA2P51587 3418 aa17.59■□□□□ 0.41
PABPC4-208ENST00000461578 A0A1B0GUL6 1792 aa17.58■□□□□ 0.41
PABPC4-208ENST00000461578 ANKRD18BA2A2Z9 1011 aa17.58■□□□□ 0.4
PABPC4-208ENST00000461578 UNCXA6NJT0 531 aa17.58■□□□□ 0.4
PABPC4-208ENST00000461578 SLC4A2P04920 1241 aa17.58■□□□□ 0.4
PABPC4-208ENST00000461578 CSF1RP07333 972 aa17.58■□□□□ 0.4
PABPC4-208ENST00000461578 CASP7P55210 303 aa17.58■□□□□ 0.4
PABPC4-208ENST00000461578 ZNF804AQ7Z570 1209 aa17.58■□□□□ 0.4
PABPC4-208ENST00000461578 ZNF333Q96JL9 665 aa17.58■□□□□ 0.4
PABPC4-208ENST00000461578 COLQQ9Y215 455 aaPredicted RBP17.58■□□□□ 0.4
PABPC4-208ENST00000461578 CHMP3Q9Y3E7 222 aa17.58■□□□□ 0.4
PABPC4-208ENST00000461578 PTCH2Q9Y6C5 1203 aa17.58■□□□□ 0.4
PABPC4-208ENST00000461578 TESPA1A2RU30 521 aaPredicted RBP17.57■□□□□ 0.4
PABPC4-208ENST00000461578 IL1R1P14778 569 aa17.57■□□□□ 0.4
PABPC4-208ENST00000461578 SLC4A8Q2Y0W8 1093 aa17.57■□□□□ 0.4
PABPC4-208ENST00000461578 SLC9C1Q4G0N8 1177 aa17.57■□□□□ 0.4
PABPC4-208ENST00000461578 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
PABPC4-208ENST00000461578 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
PABPC4-208ENST00000461578 PLIN1O60240 522 aa17.56■□□□□ 0.4
PABPC4-208ENST00000461578 TAF1CQ15572 869 aaPredicted RBP17.56■□□□□ 0.4
PABPC4-208ENST00000461578 C15orf52Q6ZUT6 534 aaKnown RBP17.56■□□□□ 0.4
PABPC4-208ENST00000461578 CDAN1Q8IWY9 1227 aa17.56■□□□□ 0.4
PABPC4-208ENST00000461578 MS4A4AQ96JQ5 239 aa17.56■□□□□ 0.4
PABPC4-208ENST00000461578 FLIIQ13045 1269 aa17.55■□□□□ 0.4
PABPC4-208ENST00000461578 FKBP5Q13451 457 aaPredicted RBP17.55■□□□□ 0.4
PABPC4-208ENST00000461578 TWISTNBQ3B726 338 aaPredicted RBP17.55■□□□□ 0.4
PABPC4-208ENST00000461578 BRI3BPQ8WY22 251 aa17.55■□□□□ 0.4
PABPC4-208ENST00000461578 TDRD3Q9H7E2 651 aaKnown RBP17.55■□□□□ 0.4
PABPC4-208ENST00000461578 ZNF70Q9UC06 446 aaPredicted RBP17.55■□□□□ 0.4
PABPC4-208ENST00000461578 CCL15-CCL14A0A0B4J2E2 113 aa17.54■□□□□ 0.4
PABPC4-208ENST00000461578 FKBP1AP62942 108 aaKnown RBP17.54■□□□□ 0.4
PABPC4-208ENST00000461578 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
PABPC4-208ENST00000461578 TNFAIP1Q13829 316 aa17.54■□□□□ 0.4
PABPC4-208ENST00000461578 CCL15Q16663 113 aa17.54■□□□□ 0.4
PABPC4-208ENST00000461578 NBPF11Q86T75 865 aa17.54■□□□□ 0.4
PABPC4-208ENST00000461578 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
PABPC4-208ENST00000461578 ZFYVE28Q9HCC9 887 aa17.54■□□□□ 0.4
PABPC4-208ENST00000461578 TCP10L2B9ZVM9 353 aa17.53■□□□□ 0.4
PABPC4-208ENST00000461578 ARHGEF6Q15052 776 aa17.53■□□□□ 0.4
PABPC4-208ENST00000461578 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
PABPC4-208ENST00000461578 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.53■□□□□ 0.4
PABPC4-208ENST00000461578 FAM43AQ8N2R8 423 aa17.53■□□□□ 0.4
PABPC4-208ENST00000461578 ZNF594Q96JF6 807 aaPredicted RBP17.53■□□□□ 0.4
PABPC4-208ENST00000461578 TTF2Q9UNY4 1162 aaKnown RBP17.53■□□□□ 0.4
PABPC4-208ENST00000461578 ZSWIM8A7E2V4 1837 aa17.53■□□□□ 0.4
PABPC4-208ENST00000461578 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
PABPC4-208ENST00000461578 GTF2A2P52657 109 aa17.52■□□□□ 0.4
PABPC4-208ENST00000461578 FOXO4P98177 505 aa17.52■□□□□ 0.4
PABPC4-208ENST00000461578 VGLL4Q14135 290 aa17.52■□□□□ 0.4
PABPC4-208ENST00000461578 MFSD14BQ5SR56 506 aa17.52■□□□□ 0.4
PABPC4-208ENST00000461578 LINS1Q8NG48 757 aa17.52■□□□□ 0.4
PABPC4-208ENST00000461578 SH3TC2Q8TF17 1288 aa17.52■□□□□ 0.4
PABPC4-208ENST00000461578 OTUD5Q96G74 571 aa17.52■□□□□ 0.4
PABPC4-208ENST00000461578 ARHGAP39Q9C0H5 1083 aa17.52■□□□□ 0.4
PABPC4-208ENST00000461578 TMEM39BQ9GZU3 492 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms