RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 HHIPL1Q96JK4 782 aa19.5■□□□□ 0.71
NUP50-213ENST00000461437 IQSEC3Q9UPP2 1182 aaPredicted RBP19.5■□□□□ 0.71
NUP50-213ENST00000461437 TNNQ9UQP3 1299 aa19.5■□□□□ 0.71
NUP50-213ENST00000461437 AKAP11Q9UKA4 1901 aa19.49■□□□□ 0.71
NUP50-213ENST00000461437 FAM155AB1AL88 458 aaPredicted RBP19.49■□□□□ 0.71
NUP50-213ENST00000461437 RARSP54136 660 aaKnown RBP19.49■□□□□ 0.71
NUP50-213ENST00000461437 PITPNM2Q9BZ72 1349 aa19.49■□□□□ 0.71
NUP50-213ENST00000461437 MAP2K2P36507 400 aa19.48■□□□□ 0.71
NUP50-213ENST00000461437 ZNF157P51786 506 aaPredicted RBP19.48■□□□□ 0.71
NUP50-213ENST00000461437 METTL24Q5JXM2 366 aa19.48■□□□□ 0.71
NUP50-213ENST00000461437 DIEXFQ68CQ4 756 aaKnown RBP19.48■□□□□ 0.71
NUP50-213ENST00000461437 FAM84BQ96KN1 310 aaPredicted RBP19.48■□□□□ 0.71
NUP50-213ENST00000461437 PRDM10Q9NQV6 1147 aa19.48■□□□□ 0.71
NUP50-213ENST00000461437 HDAC9Q9UKV0 1011 aa19.48■□□□□ 0.71
NUP50-213ENST00000461437 FZD1Q9UP38 647 aa19.48■□□□□ 0.71
NUP50-213ENST00000461437 RFX5P48382 616 aaPredicted RBP19.47■□□□□ 0.71
NUP50-213ENST00000461437 PRKG1Q13976 671 aa19.47■□□□□ 0.71
NUP50-213ENST00000461437 UBE4AQ14139 1066 aa19.47■□□□□ 0.71
NUP50-213ENST00000461437 ZBED3Q96IU2 234 aaPredicted RBP19.47■□□□□ 0.71
NUP50-213ENST00000461437 BEGAINQ9BUH8 593 aa19.47■□□□□ 0.71
NUP50-213ENST00000461437 MROH5Q6ZUA9 1318 aa19.47■□□□□ 0.71
NUP50-213ENST00000461437 CLRN2A0PK11 232 aa19.46■□□□□ 0.71
NUP50-213ENST00000461437 UBE2Q2LH0YL09 131 aa19.46■□□□□ 0.71
NUP50-213ENST00000461437 HIBADHP31937 336 aaKnown RBP19.46■□□□□ 0.71
NUP50-213ENST00000461437 GRIK5Q16478 980 aa19.46■□□□□ 0.71
NUP50-213ENST00000461437 CFAP100Q494V2 611 aa19.46■□□□□ 0.71
NUP50-213ENST00000461437 VGLL2Q8N8G2 317 aa19.46■□□□□ 0.71
NUP50-213ENST00000461437 TDRD7Q8NHU6 1098 aaKnown RBP19.46■□□□□ 0.71
NUP50-213ENST00000461437 CT47B1P0C2W7 299 aaPredicted RBP19.45■□□□□ 0.7
NUP50-213ENST00000461437 KIF23Q02241 960 aaPredicted RBP19.45■□□□□ 0.7
NUP50-213ENST00000461437 DLGAP5Q15398 846 aa19.45■□□□□ 0.7
NUP50-213ENST00000461437 MEIS3Q99687 375 aa19.45■□□□□ 0.7
NUP50-213ENST00000461437 LRRFIP2Q9Y608 721 aaKnown RBP19.45■□□□□ 0.7
NUP50-213ENST00000461437 BCAR3O75815 825 aa19.44■□□□□ 0.7
NUP50-213ENST00000461437 UBTFL1P0CB47 393 aaPredicted RBP19.44■□□□□ 0.7
NUP50-213ENST00000461437 BRPF1P55201 1214 aaPredicted RBP19.44■□□□□ 0.7
NUP50-213ENST00000461437 HNRNPUQ00839 825 aaKnown RBP eCLIP19.44■□□□□ 0.7
NUP50-213ENST00000461437 CHAF1AQ13111 956 aaPredicted RBP19.44■□□□□ 0.7
NUP50-213ENST00000461437 NOGQ13253 232 aa19.44■□□□□ 0.7
NUP50-213ENST00000461437 TTLL12Q14166 644 aaPredicted RBP19.44■□□□□ 0.7
NUP50-213ENST00000461437 MFSD14BQ5SR56 506 aa19.44■□□□□ 0.7
NUP50-213ENST00000461437 PRMT6Q96LA8 375 aaPredicted RBP19.44■□□□□ 0.7
NUP50-213ENST00000461437 API5Q9BZZ5 524 aaKnown RBP19.44■□□□□ 0.7
NUP50-213ENST00000461437 SIL1Q9H173 461 aa19.44■□□□□ 0.7
NUP50-213ENST00000461437 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.44■□□□□ 0.7
NUP50-213ENST00000461437 FAM205AQ6ZU69 1335 aa19.44■□□□□ 0.7
NUP50-213ENST00000461437 PDE8BO95263 885 aa19.43■□□□□ 0.7
NUP50-213ENST00000461437 SLC10A3P09131 477 aa19.43■□□□□ 0.7
NUP50-213ENST00000461437 RBM5P52756 815 aaKnown RBP eCLIP19.43■□□□□ 0.7
NUP50-213ENST00000461437 PTPN12Q05209 780 aaKnown RBP19.43■□□□□ 0.7
NUP50-213ENST00000461437 RASAL3Q86YV0 1011 aa19.43■□□□□ 0.7
NUP50-213ENST00000461437 BCAMP50895 628 aa19.42■□□□□ 0.7
NUP50-213ENST00000461437 FBXO33Q7Z6M2 555 aa19.42■□□□□ 0.7
NUP50-213ENST00000461437 VEZTQ9HBM0 779 aa19.42■□□□□ 0.7
NUP50-213ENST00000461437 PA2G4Q9UQ80 394 aaKnown RBP19.42■□□□□ 0.7
NUP50-213ENST00000461437 SSC5DA1L4H1 1573 aa19.41■□□□□ 0.7
NUP50-213ENST00000461437 EYA2O00167 538 aa19.41■□□□□ 0.7
NUP50-213ENST00000461437 FKBP1AP62942 108 aaKnown RBP19.41■□□□□ 0.7
NUP50-213ENST00000461437 MKRN3Q13064 507 aaKnown RBP19.41■□□□□ 0.7
NUP50-213ENST00000461437 ATG9AQ7Z3C6 839 aa19.41■□□□□ 0.7
NUP50-213ENST00000461437 VPS37DQ86XT2 251 aa19.41■□□□□ 0.7
NUP50-213ENST00000461437 APOBEC3FQ8IUX4 373 aaKnown RBP19.41■□□□□ 0.7
NUP50-213ENST00000461437 FRAT1Q92837 279 aaPredicted RBP19.41■□□□□ 0.7
NUP50-213ENST00000461437 CCDC102AQ96A19 550 aa19.41■□□□□ 0.7
NUP50-213ENST00000461437 TTF2Q9UNY4 1162 aaKnown RBP19.41■□□□□ 0.7
NUP50-213ENST00000461437 SPDYE2BA6NHP3 402 aa19.4■□□□□ 0.7
NUP50-213ENST00000461437 SPDYE6P0CI01 402 aa19.4■□□□□ 0.7
NUP50-213ENST00000461437 FGFR2P21802 821 aa19.4■□□□□ 0.7
NUP50-213ENST00000461437 CLUAP1Q96AJ1 413 aa19.4■□□□□ 0.7
NUP50-213ENST00000461437 OTOFQ9HC10 1997 aa19.39■□□□□ 0.7
NUP50-213ENST00000461437 MTMR14Q8NCE2 650 aa19.39■□□□□ 0.69
NUP50-213ENST00000461437 CSRNP1Q96S65 589 aa19.39■□□□□ 0.69
NUP50-213ENST00000461437 DEFB129Q9H1M3 183 aa19.39■□□□□ 0.69
NUP50-213ENST00000461437 KIF16BQ96L93 1317 aa19.39■□□□□ 0.69
NUP50-213ENST00000461437 FRAT2O75474 233 aaPredicted RBP19.38■□□□□ 0.69
NUP50-213ENST00000461437 COL1A1P02452 1464 aaPredicted RBP19.38■□□□□ 0.69
NUP50-213ENST00000461437 TRIM27P14373 513 aa19.38■□□□□ 0.69
NUP50-213ENST00000461437 FKBP1BP68106 108 aa19.38■□□□□ 0.69
NUP50-213ENST00000461437 PUM3Q15397 648 aaKnown RBP19.38■□□□□ 0.69
NUP50-213ENST00000461437 CAVIN4Q5BKX8 364 aa19.38■□□□□ 0.69
NUP50-213ENST00000461437 TDRD3Q9H7E2 651 aaKnown RBP19.38■□□□□ 0.69
NUP50-213ENST00000461437 ANGEL1Q9UNK9 670 aaKnown RBP19.38■□□□□ 0.69
NUP50-213ENST00000461437 TRPA1O75762 1119 aa19.37■□□□□ 0.69
NUP50-213ENST00000461437 NF2P35240 595 aa19.37■□□□□ 0.69
NUP50-213ENST00000461437 MMP14P50281 582 aa19.37■□□□□ 0.69
NUP50-213ENST00000461437 CDAN1Q8IWY9 1227 aa19.37■□□□□ 0.69
NUP50-213ENST00000461437 IFIT1P09914 478 aaKnown RBP19.36■□□□□ 0.69
NUP50-213ENST00000461437 CRKP46108 304 aa19.36■□□□□ 0.69
NUP50-213ENST00000461437 NBPF12Q5TAG4 269 aaPredicted RBP19.36■□□□□ 0.69
NUP50-213ENST00000461437 INTS3Q68E01 1043 aaKnown RBP19.36■□□□□ 0.69
NUP50-213ENST00000461437 RNF186Q9NXI6 227 aa19.36■□□□□ 0.69
NUP50-213ENST00000461437 ZNF70Q9UC06 446 aaPredicted RBP19.36■□□□□ 0.69
NUP50-213ENST00000461437 MYO1BO43795 1136 aa19.35■□□□□ 0.69
NUP50-213ENST00000461437 SLC5A1P13866 664 aa19.35■□□□□ 0.69
NUP50-213ENST00000461437 TCP10L2B9ZVM9 353 aa19.34■□□□□ 0.69
NUP50-213ENST00000461437 CA12O43570 354 aa19.34■□□□□ 0.69
NUP50-213ENST00000461437 ADORA1P30542 326 aa19.34■□□□□ 0.69
NUP50-213ENST00000461437 CACNB3P54284 484 aa19.34■□□□□ 0.69
NUP50-213ENST00000461437 RASA3Q14644 834 aa19.34■□□□□ 0.69
NUP50-213ENST00000461437 ATP2B3Q16720 1220 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms