RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 HFE2Q6ZVN8 426 aa4.89□□□□□ -1.63
VCL-203ENST00000461383 VPS37DQ86XT2 251 aa4.89□□□□□ -1.63
VCL-203ENST00000461383 RELL1Q8IUW5 271 aa4.89□□□□□ -1.63
VCL-203ENST00000461383 ELOA3Q8NG57 546 aa4.89□□□□□ -1.63
VCL-203ENST00000461383 UBXN4Q92575 508 aa4.89□□□□□ -1.63
VCL-203ENST00000461383 TNFRSF25Q93038 417 aa4.89□□□□□ -1.63
VCL-203ENST00000461383 PRDM6Q9NQX0 595 aa4.89□□□□□ -1.63
VCL-203ENST00000461383 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.89□□□□□ -1.63
VCL-203ENST00000461383 LOC102724428A0A0B4J2F2 783 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 FBXO24O75426 580 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 TRPA1O75762 1119 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 KIF4AO95239 1232 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 FURINP09958 794 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 ACPPP15309 386 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 EIF2AK2P19525 551 aaKnown RBP4.88□□□□□ -1.63
VCL-203ENST00000461383 ITGB7P26010 798 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 DNAJA1P31689 397 aaKnown RBP4.88□□□□□ -1.63
VCL-203ENST00000461383 TNNI2P48788 182 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 SIK1P57059 783 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 GPLD1P80108 840 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 PTPN12Q05209 780 aaKnown RBP4.88□□□□□ -1.63
VCL-203ENST00000461383 PWP1Q13610 501 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 COL13A1Q5TAT6 717 aaPredicted RBP4.88□□□□□ -1.63
VCL-203ENST00000461383 PRPF40BQ6NWY9 871 aaKnown RBP4.88□□□□□ -1.63
VCL-203ENST00000461383 TPTE2Q6XPS3 522 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 GLIS3Q8NEA6 775 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 DDX41Q9UJV9 622 aaKnown RBP4.88□□□□□ -1.63
VCL-203ENST00000461383 PPM1HQ9ULR3 514 aa4.88□□□□□ -1.63
VCL-203ENST00000461383 J3QW42 95 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 SMNDC1O75940 238 aaKnown RBP eCLIP4.87□□□□□ -1.63
VCL-203ENST00000461383 RLBP1P12271 317 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 ATP2B1P20020 1258 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 LMNB1P20700 586 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 RACK1P63244 317 aaKnown RBP4.87□□□□□ -1.63
VCL-203ENST00000461383 MAP3K11Q16584 847 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 SYT9Q86SS6 491 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 CCNJLQ8IV13 435 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 Q8N3U1 123 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 TINF2Q9BSI4 451 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 NOC4LQ9BVI4 516 aaKnown RBP4.87□□□□□ -1.63
VCL-203ENST00000461383 CEP44Q9C0F1 390 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 ABCB6Q9NP58 842 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 DZANK1Q9NVP4 752 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 PRKAG2Q9UGJ0 569 aa4.87□□□□□ -1.63
VCL-203ENST00000461383 GPN3Q9UHW5 284 aaPredicted RBP4.87□□□□□ -1.63
VCL-203ENST00000461383 METTL12A8MUP2 240 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 MINDY4BA8MYZ0 360 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 F6X3S4 739 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 PDE2AO00408 941 aaPredicted RBP4.86□□□□□ -1.63
VCL-203ENST00000461383 HOXD8P13378 290 aaPredicted RBP4.86□□□□□ -1.63
VCL-203ENST00000461383 GBP2P32456 591 aaPredicted RBP4.86□□□□□ -1.63
VCL-203ENST00000461383 PCBP4P57723 403 aaKnown RBP4.86□□□□□ -1.63
VCL-203ENST00000461383 ATP11AP98196 1134 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 ARID5AQ03989 594 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 COL9A3Q14050 684 aaPredicted RBP4.86□□□□□ -1.63
VCL-203ENST00000461383 CEP135Q66GS9 1140 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 CEP120Q8N960 986 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 TMEM102Q8N9M5 508 aaPredicted RBP4.86□□□□□ -1.63
VCL-203ENST00000461383 SLC43A3Q8NBI5 491 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 C3orf58Q8NDZ4 430 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 TRPM4Q8TD43 1214 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 TCF12Q99081 682 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 PBX4Q9BYU1 374 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 RASSF4Q9H2L5 321 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 COPRSQ9NQ92 184 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 KBTBD4Q9NVX7 518 aa4.86□□□□□ -1.63
VCL-203ENST00000461383 DNAJB12Q9NXW2 375 aaKnown RBP4.86□□□□□ -1.63
VCL-203ENST00000461383 A0A096LPE4 126 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 A0A1W2PPZ6 126 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 LOC105371045A0A1W2PR82 267 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 SPDYE3A6NKU9 549 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 CPB1P15086 417 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 GTF2F1P35269 517 aaKnown RBP eCLIP4.85□□□□□ -1.632e-6■■■□□ 14.6
VCL-203ENST00000461383 GRIA4P48058 902 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 SPRED3Q2MJR0 410 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 DIEXFQ68CQ4 756 aaKnown RBP4.85□□□□□ -1.63
VCL-203ENST00000461383 ELMSAN1Q6PJG2 1045 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 SV2BQ7L1I2 683 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 ERMP1Q7Z2K6 904 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 FAM35AQ86V20 835 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 KIAA0825Q8IV33 1275 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 HHIPQ96QV1 700 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 SPON2Q9BUD6 331 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 PLVAPQ9BX97 442 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 SRA1Q9HD15 236 aaKnown RBP4.85□□□□□ -1.63
VCL-203ENST00000461383 STARD13Q9Y3M8 1113 aa4.85□□□□□ -1.63
VCL-203ENST00000461383 ZBTB42B2RXF5 422 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 ALAS2P22557 587 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 GATA4P43694 442 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 PPP2R3AQ06190 1150 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 PAK2Q13177 524 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 NXPE3Q969Y0 559 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 GPRASP2Q96D09 838 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.84□□□□□ -1.639e-7■■■■□ 24.4
VCL-203ENST00000461383 TRIM56Q9BRZ2 755 aaKnown RBP4.84□□□□□ -1.63
VCL-203ENST00000461383 RSRP1Q9BUV0 290 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 BHLHE41Q9C0J9 482 aaPredicted RBP4.84□□□□□ -1.63
VCL-203ENST00000461383 SAMM50Q9Y512 469 aa4.84□□□□□ -1.63
VCL-203ENST00000461383 CELA3AP09093 270 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms