RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 APBA3O96018 575 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 HSP90B1P14625 803 aaKnown RBP13.25□□□□□ -0.29
COPS7B-217ENST00000461350 KCNJ4P48050 445 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 CCDC94Q9BW85 323 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-217ENST00000461350 RGS17Q9UGC6 210 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-217ENST00000461350 SNX14Q9Y5W7 946 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 LAMB2P55268 1798 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 SYT1P21579 422 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 MCAMP43121 646 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 AK2P54819 239 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 GIMAP6Q6P9H5 292 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 TPTE2Q6XPS3 522 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 CELF1Q92879 486 aaKnown RBP13.24□□□□□ -0.29
COPS7B-217ENST00000461350 CASZ1Q86V15 1759 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 MROH5Q6ZUA9 1318 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 CPA1P15085 419 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 PUM3Q15397 648 aaKnown RBP13.24□□□□□ -0.29
COPS7B-217ENST00000461350 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 SMAP1Q8IYB5 467 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-217ENST00000461350 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 NYXQ9GZU5 481 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-217ENST00000461350 ATP6V1DQ9Y5K8 247 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 RBM8AQ9Y5S9 174 aaKnown RBP13.24□□□□□ -0.29
COPS7B-217ENST00000461350 UBR3Q6ZT12 1888 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 GOLGB1Q14789 3259 aaKnown RBP13.24□□□□□ -0.29
COPS7B-217ENST00000461350 CHRNDQ07001 517 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 PRDM4Q9UKN5 801 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 LRP5O75197 1615 aa13.24□□□□□ -0.29
COPS7B-217ENST00000461350 MED23Q9ULK4 1368 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 SF3B3Q15393 1217 aaKnown RBP13.23□□□□□ -0.29
COPS7B-217ENST00000461350 CCDC102BQ68D86 513 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 POTEAQ6S8J7 498 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 LIMCH1Q9UPQ0 1083 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 KDM4AO75164 1064 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 F13A1P00488 732 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 FGFR2P21802 821 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 LPIN2Q92539 896 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 CDC5LQ99459 802 aaKnown RBP13.23□□□□□ -0.29
COPS7B-217ENST00000461350 GYS1P13807 737 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 SLC10A5Q5PT55 438 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 SLC51AQ86UW1 340 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 KIF3AQ9Y496 699 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 TAF6LQ9Y6J9 622 aa13.23□□□□□ -0.29
COPS7B-217ENST00000461350 RTL9Q8NET4 1388 aa13.22□□□□□ -0.29
COPS7B-217ENST00000461350 ADCK5Q3MIX3 580 aa13.22□□□□□ -0.29
COPS7B-217ENST00000461350 SPC24Q8NBT2 197 aa13.22□□□□□ -0.29
COPS7B-217ENST00000461350 MAP4K1Q92918 833 aa13.22□□□□□ -0.29
COPS7B-217ENST00000461350 COL9A3Q14050 684 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-217ENST00000461350 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
COPS7B-217ENST00000461350 AKAP11Q9UKA4 1901 aa13.22□□□□□ -0.29
COPS7B-217ENST00000461350 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 RGL2O15211 777 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 SLC5A1P13866 664 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.29
COPS7B-217ENST00000461350 NECTIN1Q15223 517 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 ZNF827Q17R98 1081 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 MCMDC2Q4G0Z9 681 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 CCDC83Q8IWF9 413 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 IQSEC3Q9UPP2 1182 aaPredicted RBP13.21□□□□□ -0.29
COPS7B-217ENST00000461350 VPS37CA5D8V6 355 aaPredicted RBP13.21□□□□□ -0.29
COPS7B-217ENST00000461350 ADRA2BP18089 450 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 BCAMP50895 628 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 DNM1Q05193 864 aaKnown RBP13.21□□□□□ -0.29
COPS7B-217ENST00000461350 VPS53Q5VIR6 699 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 CREB3L3Q68CJ9 461 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.21□□□□□ -0.29
COPS7B-217ENST00000461350 TFCP2L1Q9NZI6 479 aa13.21□□□□□ -0.29
COPS7B-217ENST00000461350 MYO5AQ9Y4I1 1855 aaKnown RBP13.21□□□□□ -0.3
COPS7B-217ENST00000461350 EPB41L2O43491 1005 aaKnown RBP13.21□□□□□ -0.3
COPS7B-217ENST00000461350 CHAF1AQ13111 956 aaPredicted RBP13.21□□□□□ -0.3
COPS7B-217ENST00000461350 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.3
COPS7B-217ENST00000461350 CNBD1Q8NA66 436 aa13.21□□□□□ -0.3
COPS7B-217ENST00000461350 TTC14Q96N46 770 aa13.21□□□□□ -0.3
COPS7B-217ENST00000461350 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
COPS7B-217ENST00000461350 RNF113AO15541 343 aaKnown RBP13.2□□□□□ -0.3
COPS7B-217ENST00000461350 GJB2P29033 226 aa13.2□□□□□ -0.3
COPS7B-217ENST00000461350 WASHC4Q2M389 1173 aa13.2□□□□□ -0.3
COPS7B-217ENST00000461350 JAKMIP1Q96N16 626 aaKnown RBP13.2□□□□□ -0.3
COPS7B-217ENST00000461350 M0R2C6 588 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 SLC27A2O14975 620 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 LARGE1O95461 756 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 CBX1P83916 185 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 OSBP2Q969R2 916 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 PIH1D3Q9NQM4 214 aaKnown RBP13.19□□□□□ -0.3
COPS7B-217ENST00000461350 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 TNRC6CQ9HCJ0 1690 aaKnown RBP13.19□□□□□ -0.3
COPS7B-217ENST00000461350 MAST3O60307 1309 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 RPS8P62241 208 aaKnown RBP13.19□□□□□ -0.3
COPS7B-217ENST00000461350 PRR5LQ6MZQ0 368 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 SPTLC3Q9NUV7 552 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-217ENST00000461350 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
COPS7B-217ENST00000461350 RFX7Q2KHR2 1363 aa13.19□□□□□ -0.3
COPS7B-217ENST00000461350 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms