RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 SIK1P57059 783 aa9.21□□□□□ -0.94
NUP50-212ENST00000461194 CABP4P57796 275 aa9.21□□□□□ -0.94
NUP50-212ENST00000461194 MEIOBQ8N635 442 aa9.21□□□□□ -0.94
NUP50-212ENST00000461194 KDF1Q8NAX2 398 aaPredicted RBP9.21□□□□□ -0.94
NUP50-212ENST00000461194 TSEN34Q9BSV6 310 aaKnown RBP9.21□□□□□ -0.94
NUP50-212ENST00000461194 AAASQ9NRG9 546 aa9.21□□□□□ -0.94
NUP50-212ENST00000461194 ASAP1Q9ULH1 1129 aa9.21□□□□□ -0.94
NUP50-212ENST00000461194 TOGARAM1Q9Y4F4 1720 aa9.21□□□□□ -0.94
NUP50-212ENST00000461194 A0A1W2PRU2 124 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 ZBTB7AO95365 584 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 BMP1P13497 986 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 PTGIRP43119 386 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 SMCPP49901 116 aaPredicted RBP9.2□□□□□ -0.94
NUP50-212ENST00000461194 RALBP1Q15311 655 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 CRTC2Q53ET0 693 aaPredicted RBP9.2□□□□□ -0.94
NUP50-212ENST00000461194 C6orf118Q5T5N4 469 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 GAS2L2Q8NHY3 880 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 MTFR1LQ9H019 292 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 RAB6BQ9NRW1 208 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 TFCP2L1Q9NZI6 479 aa9.2□□□□□ -0.94
NUP50-212ENST00000461194 LY75O60449 1722 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 MEN1O00255 615 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 RNMTO43148 476 aaKnown RBP9.19□□□□□ -0.94
NUP50-212ENST00000461194 GNRH1P01148 92 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 U2AF1L5P0DN76 240 aaPredicted RBP9.19□□□□□ -0.94
NUP50-212ENST00000461194 BMP2P12643 396 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 PRKAR2BP31323 418 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 U2AF1Q01081 240 aaKnown RBP eCLIP9.19□□□□□ -0.94
NUP50-212ENST00000461194 CCDC102BQ68D86 513 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 MRPL14Q6P1L8 145 aaKnown RBP9.19□□□□□ -0.94
NUP50-212ENST00000461194 LARGE2Q8N3Y3 721 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 TPCN2Q8NHX9 752 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 SLC16A10Q8TF71 515 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 LGR6Q9HBX8 967 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 DACH1Q9UI36 760 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 RBM19Q9Y4C8 960 aaKnown RBP9.19□□□□□ -0.94
NUP50-212ENST00000461194 PNPLA7Q6ZV29 1317 aa9.19□□□□□ -0.94
NUP50-212ENST00000461194 PTK7Q13308 1070 aa9.18□□□□□ -0.94
NUP50-212ENST00000461194 ITPK1Q13572 414 aa9.18□□□□□ -0.94
NUP50-212ENST00000461194 CASZ1Q86V15 1759 aa9.18□□□□□ -0.94
NUP50-212ENST00000461194 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
NUP50-212ENST00000461194 SLC52A2Q9HAB3 445 aa9.18□□□□□ -0.94
NUP50-212ENST00000461194 GNAT3A8MTJ3 354 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L15C9J2P7 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L13C9JLJ4 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L12C9JPN9 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L11C9JVI0 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L21D6R901 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L18D6R9N7 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L22D6RA61 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L17D6RBQ6 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L19D6RCP7 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L20D6RJB6 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 GDF10P55107 478 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 USP17L24Q0WX57 530 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 DPYDQ12882 1025 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 SCARF1Q14162 830 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 COL23A1Q86Y22 540 aaPredicted RBP9.17□□□□□ -0.94
NUP50-212ENST00000461194 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.17□□□□□ -0.94
NUP50-212ENST00000461194 LINC00116Q8NCU8 138 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 FLAD1Q8NFF5 587 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 PHACTR3Q96KR7 559 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 SLC4A9Q96Q91 983 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 PURBQ96QR8 312 aaKnown RBP9.17□□□□□ -0.94
NUP50-212ENST00000461194 ETNK1Q9HBU6 452 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 PPP1R1BQ9UD71 204 aaPredicted RBP9.17□□□□□ -0.94
NUP50-212ENST00000461194 SERTAD1Q9UHV2 236 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 ITGB4P16144 1822 aa9.17□□□□□ -0.94
NUP50-212ENST00000461194 MAP3K5Q99683 1374 aa9.16□□□□□ -0.94
NUP50-212ENST00000461194 FAM196BA6NMK8 535 aa9.16□□□□□ -0.94
NUP50-212ENST00000461194 SFI1A8K8P3 1242 aa9.16□□□□□ -0.94
NUP50-212ENST00000461194 ATG7O95352 703 aa9.16□□□□□ -0.94
NUP50-212ENST00000461194 SCNN1DP51172 638 aa9.16□□□□□ -0.94
NUP50-212ENST00000461194 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
NUP50-212ENST00000461194 IL17REQ8NFR9 667 aa9.16□□□□□ -0.94
NUP50-212ENST00000461194 INSM2Q96T92 566 aaPredicted RBP9.16□□□□□ -0.94
NUP50-212ENST00000461194 NOVA2Q9UNW9 492 aaKnown RBP9.16□□□□□ -0.94
NUP50-212ENST00000461194 MYBBP1AQ9BQG0 1328 aaKnown RBP9.15□□□□□ -0.94
NUP50-212ENST00000461194 PTCD1O75127 700 aaKnown RBP9.15□□□□□ -0.94
NUP50-212ENST00000461194 AMIGO3Q86WK7 504 aa9.15□□□□□ -0.94
NUP50-212ENST00000461194 FAM200AQ8TCP9 573 aa9.15□□□□□ -0.94
NUP50-212ENST00000461194 CNKSR1Q969H4 720 aa9.15□□□□□ -0.94
NUP50-212ENST00000461194 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
NUP50-212ENST00000461194 ATP13A2Q9NQ11 1180 aa9.15□□□□□ -0.94
NUP50-212ENST00000461194 MRC1P22897 1456 aa9.15□□□□□ -0.95
NUP50-212ENST00000461194 CNTNAP4Q9C0A0 1308 aa9.14□□□□□ -0.95
NUP50-212ENST00000461194 TMEM229AB2RXF0 380 aa9.14□□□□□ -0.95
NUP50-212ENST00000461194 IL2RAP01589 272 aa9.14□□□□□ -0.95
NUP50-212ENST00000461194 INHAP05111 366 aa9.14□□□□□ -0.95
NUP50-212ENST00000461194 SSFA2P28290 1259 aa9.14□□□□□ -0.95
NUP50-212ENST00000461194 POLD1P28340 1107 aa9.14□□□□□ -0.95
NUP50-212ENST00000461194 CLN3Q13286 438 aa9.14□□□□□ -0.95
NUP50-212ENST00000461194 SLC39A6Q13433 755 aa9.14□□□□□ -0.95
NUP50-212ENST00000461194 ZFP42Q96MM3 310 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms