RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 LBX1P52954 281 aa16.5■□□□□ 0.23
RAB11FIP3-207ENST00000461009 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
RAB11FIP3-207ENST00000461009 ZNF594Q96JF6 807 aaPredicted RBP16.5■□□□□ 0.23
RAB11FIP3-207ENST00000461009 CHMP4BQ9H444 224 aaKnown RBP16.5■□□□□ 0.23
RAB11FIP3-207ENST00000461009 AOC2O75106 756 aa16.49■□□□□ 0.23
RAB11FIP3-207ENST00000461009 KLRK1P26718 216 aa16.49■□□□□ 0.23
RAB11FIP3-207ENST00000461009 NF2P35240 595 aa16.49■□□□□ 0.23
RAB11FIP3-207ENST00000461009 FKBP1BP68106 108 aa16.49■□□□□ 0.23
RAB11FIP3-207ENST00000461009 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
RAB11FIP3-207ENST00000461009 CDCA5Q96FF9 252 aa16.49■□□□□ 0.23
RAB11FIP3-207ENST00000461009 MXD3Q9BW11 206 aa16.49■□□□□ 0.23
RAB11FIP3-207ENST00000461009 POLR2AP24928 1970 aaKnown RBP16.49■□□□□ 0.23
RAB11FIP3-207ENST00000461009 MROH5Q6ZUA9 1318 aa16.48■□□□□ 0.23
RAB11FIP3-207ENST00000461009 RLBP1P12271 317 aa16.48■□□□□ 0.23
RAB11FIP3-207ENST00000461009 ZNF157P51786 506 aaPredicted RBP16.48■□□□□ 0.23
RAB11FIP3-207ENST00000461009 UBE4AQ14139 1066 aa16.48■□□□□ 0.23
RAB11FIP3-207ENST00000461009 PANK1Q8TE04 598 aa16.48■□□□□ 0.23
RAB11FIP3-207ENST00000461009 ASTN2O75129 1339 aaPredicted RBP16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 WNT10BO00744 389 aa16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 ZBTB7BO15156 539 aaPredicted RBP16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 MYO1BO43795 1136 aa16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 HSPA8P11142 646 aaKnown RBP16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 IL1R1P14778 569 aa16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 NBPF9Q3BBW0 867 aa16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 DLK2Q6UY11 383 aa16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 APOBEC3FQ8IUX4 373 aaKnown RBP16.47■□□□□ 0.23
RAB11FIP3-207ENST00000461009 CAPN15O75808 1086 aa16.46■□□□□ 0.23
RAB11FIP3-207ENST00000461009 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
RAB11FIP3-207ENST00000461009 TTLL12Q14166 644 aaPredicted RBP16.46■□□□□ 0.23
RAB11FIP3-207ENST00000461009 DLGAP5Q15398 846 aa16.46■□□□□ 0.23
RAB11FIP3-207ENST00000461009 FBXO3Q9UK99 471 aa16.46■□□□□ 0.23
RAB11FIP3-207ENST00000461009 DDX19BQ9UMR2 479 aa16.46■□□□□ 0.23
RAB11FIP3-207ENST00000461009 SNAP23O00161 211 aa16.45■□□□□ 0.22
RAB11FIP3-207ENST00000461009 SASH1O94885 1247 aa16.45■□□□□ 0.22
RAB11FIP3-207ENST00000461009 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
RAB11FIP3-207ENST00000461009 MVPQ14764 893 aaKnown RBP16.45■□□□□ 0.22
RAB11FIP3-207ENST00000461009 CAVIN4Q5BKX8 364 aa16.45■□□□□ 0.22
RAB11FIP3-207ENST00000461009 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
RAB11FIP3-207ENST00000461009 REM2Q8IYK8 340 aaPredicted RBP16.45■□□□□ 0.22
RAB11FIP3-207ENST00000461009 RIPOR2Q9Y4F9 1068 aa16.45■□□□□ 0.22
RAB11FIP3-207ENST00000461009 SRGAP3O43295 1099 aa16.44■□□□□ 0.22
RAB11FIP3-207ENST00000461009 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
RAB11FIP3-207ENST00000461009 RFX5P48382 616 aaPredicted RBP16.44■□□□□ 0.22
RAB11FIP3-207ENST00000461009 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
RAB11FIP3-207ENST00000461009 MTX1Q13505 466 aa16.44■□□□□ 0.22
RAB11FIP3-207ENST00000461009 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
RAB11FIP3-207ENST00000461009 THSD7BQ9C0I4 1608 aa16.44■□□□□ 0.22
RAB11FIP3-207ENST00000461009 F8W031 263 aaPredicted RBP16.43■□□□□ 0.22
RAB11FIP3-207ENST00000461009 EYA2O00167 538 aa16.43■□□□□ 0.22
RAB11FIP3-207ENST00000461009 RBM5P52756 815 aaKnown RBP eCLIP16.43■□□□□ 0.22
RAB11FIP3-207ENST00000461009 KLHDC4Q8TBB5 520 aa16.43■□□□□ 0.22
RAB11FIP3-207ENST00000461009 COG6Q9Y2V7 657 aa16.43■□□□□ 0.22
RAB11FIP3-207ENST00000461009 IRS2Q9Y4H2 1338 aa16.43■□□□□ 0.22
RAB11FIP3-207ENST00000461009 CIAO1O76071 339 aa16.42■□□□□ 0.22
RAB11FIP3-207ENST00000461009 ATP8B2P98198 1209 aa16.42■□□□□ 0.22
RAB11FIP3-207ENST00000461009 LRRC24Q50LG9 513 aa16.42■□□□□ 0.22
RAB11FIP3-207ENST00000461009 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
RAB11FIP3-207ENST00000461009 MTMR14Q8NCE2 650 aa16.42■□□□□ 0.22
RAB11FIP3-207ENST00000461009 COPRSQ9NQ92 184 aa16.42■□□□□ 0.22
RAB11FIP3-207ENST00000461009 PDE8BO95263 885 aa16.41■□□□□ 0.22
RAB11FIP3-207ENST00000461009 SLC10A3P09131 477 aa16.41■□□□□ 0.22
RAB11FIP3-207ENST00000461009 GYG1P46976 350 aa16.41■□□□□ 0.22
RAB11FIP3-207ENST00000461009 KIF23Q02241 960 aaPredicted RBP16.41■□□□□ 0.22
RAB11FIP3-207ENST00000461009 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
RAB11FIP3-207ENST00000461009 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
RAB11FIP3-207ENST00000461009 FAM205AQ6ZU69 1335 aa16.41■□□□□ 0.22
RAB11FIP3-207ENST00000461009 FAM155AB1AL88 458 aaPredicted RBP16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 IFIT1P09914 478 aaKnown RBP16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 MFSD14BQ5SR56 506 aa16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 CERS5Q8N5B7 392 aa16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 TBC1D22AQ8WUA7 517 aa16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 FAM84BQ96KN1 310 aaPredicted RBP16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 SIL1Q9H173 461 aa16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 SCAF8Q9UPN6 1271 aaKnown RBP16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 JAG2Q9Y219 1238 aa16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 PPP2R3BQ9Y5P8 575 aa16.4■□□□□ 0.22
RAB11FIP3-207ENST00000461009 PAPPA2Q9BXP8 1791 aa16.39■□□□□ 0.21
RAB11FIP3-207ENST00000461009 G3BP1Q13283 466 aaKnown RBP eCLIP16.39■□□□□ 0.21
RAB11FIP3-207ENST00000461009 PUM3Q15397 648 aaKnown RBP16.39■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SUPT20HL1Q3ZLR7 823 aa16.39■□□□□ 0.21
RAB11FIP3-207ENST00000461009 PRAMEF18Q5VWM3 479 aa16.39■□□□□ 0.21
RAB11FIP3-207ENST00000461009 ZBED3Q96IU2 234 aaPredicted RBP16.39■□□□□ 0.21
RAB11FIP3-207ENST00000461009 DEFB129Q9H1M3 183 aa16.39■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SAGE1Q9NXZ1 904 aa16.39■□□□□ 0.21
RAB11FIP3-207ENST00000461009 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
RAB11FIP3-207ENST00000461009 A0A1B0GUL6 1792 aa16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 COL1A1P02452 1464 aaPredicted RBP16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 UBE2Q2LH0YL09 131 aa16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 TNFAIP1Q13829 316 aa16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 C20orf194Q5TEA3 1177 aa16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
RAB11FIP3-207ENST00000461009 VEZTQ9HBM0 779 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms