RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 KANSL3Q9P2N6 904 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 POLIQ9UNA4 740 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 LINC01387J3KSC0 135 aa4.59□□□□□ -1.67
HPS3-203ENST00000460822 KIF4AO95239 1232 aa4.59□□□□□ -1.67
HPS3-203ENST00000460822 H2AFB1P0C5Y9 115 aa4.59□□□□□ -1.67
HPS3-203ENST00000460822 H2AFB2P0C5Z0 115 aa4.59□□□□□ -1.67
HPS3-203ENST00000460822 SREK1Q8WXA9 508 aaKnown RBP4.59□□□□□ -1.67
HPS3-203ENST00000460822 GGNBP2Q9H3C7 697 aa4.59□□□□□ -1.67
HPS3-203ENST00000460822 DLL1O00548 723 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 FZD6O60353 706 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 PHACTR2O75167 634 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 DEAF1O75398 565 aaPredicted RBP4.58□□□□□ -1.68
HPS3-203ENST00000460822 CDC25BP30305 580 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 C1orf127Q8N9H9 656 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 DRC1Q96MC2 740 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 AKTIPQ9H8T0 292 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 CNTN3Q9P232 1028 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 A6NHS1 94 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 GPR182O15218 404 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 IGHA2P01877 340 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 LDHBP07195 334 aaKnown RBP4.58□□□□□ -1.68
HPS3-203ENST00000460822 ERCC5P28715 1186 aaPredicted RBP4.58□□□□□ -1.68
HPS3-203ENST00000460822 XPCQ01831 940 aaPredicted RBP4.58□□□□□ -1.68
HPS3-203ENST00000460822 DSC3Q14574 896 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 NAALADL2Q58DX5 795 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 C9orf131Q5VYM1 1079 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 CEP120Q8N960 986 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 DMRTB1Q96MA1 342 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 CITED4Q96RK1 184 aa4.58□□□□□ -1.68
HPS3-203ENST00000460822 SCAMP3O14828 347 aaKnown RBP4.57□□□□□ -1.68
HPS3-203ENST00000460822 NOS3P29474 1203 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 ARL4DP49703 201 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 SETDB1Q15047 1291 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 LDLRAD1Q5T700 205 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 TXNDC11Q6PKC3 985 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 SNX29Q8TEQ0 813 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 DUSP9Q99956 384 aaKnown RBP4.57□□□□□ -1.68
HPS3-203ENST00000460822 MRS2Q9HD23 443 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 RNF19AQ9NV58 838 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 PPP1R1BQ9UD71 204 aaPredicted RBP4.57□□□□□ -1.68
HPS3-203ENST00000460822 PARP2Q9UGN5 583 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 SALL4Q9UJQ4 1053 aa4.57□□□□□ -1.68
HPS3-203ENST00000460822 PRPF40AO75400 957 aaKnown RBP4.56□□□□□ -1.68
HPS3-203ENST00000460822 NEFLP07196 543 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 EDN3P14138 238 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 CD68P34810 354 aaPredicted RBP4.56□□□□□ -1.68
HPS3-203ENST00000460822 HDLBPQ00341 1268 aaKnown RBP4.56□□□□□ -1.68
HPS3-203ENST00000460822 PDE3BQ13370 1112 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 KLHL23Q8NBE8 558 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 FAM129BQ96TA1 746 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 SH2B1Q9NRF2 756 aaPredicted RBP4.56□□□□□ -1.68
HPS3-203ENST00000460822 PDE2AO00408 941 aaPredicted RBP4.56□□□□□ -1.68
HPS3-203ENST00000460822 GLB1P16278 677 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 PLCB3Q01970 1234 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 TMEM130Q8N3G9 435 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 TMEM87AQ8NBN3 555 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 SETDB2Q96T68 719 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 POP1Q99575 1024 aaKnown RBP4.56□□□□□ -1.68
HPS3-203ENST00000460822 SEC31BQ9NQW1 1179 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 WWC3Q9ULE0 1092 aa4.56□□□□□ -1.68
HPS3-203ENST00000460822 F8W735 103 aaPredicted RBP4.55□□□□□ -1.68
HPS3-203ENST00000460822 FSCN2O14926 492 aa4.55□□□□□ -1.68
HPS3-203ENST00000460822 SORBS3O60504 671 aa4.55□□□□□ -1.68
HPS3-203ENST00000460822 TNFRSF21O75509 655 aa4.55□□□□□ -1.68
HPS3-203ENST00000460822 ALX3O95076 343 aa4.55□□□□□ -1.68
HPS3-203ENST00000460822 TXKP42681 527 aa4.55□□□□□ -1.68
HPS3-203ENST00000460822 ACAD11Q709F0 780 aa4.55□□□□□ -1.68
HPS3-203ENST00000460822 OSMRQ99650 979 aa4.55□□□□□ -1.68
HPS3-203ENST00000460822 CARD10Q9BWT7 1032 aa4.55□□□□□ -1.68
HPS3-203ENST00000460822 ADAM19Q9H013 955 aa4.55□□□□□ -1.68
HPS3-203ENST00000460822 H3BRJ5 948 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 FGD1P98174 961 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 ATP2B2Q01814 1243 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 DUOXA2Q1HG44 320 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 TMC4Q7Z404 712 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 NT5DC4Q86YG4 428 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 WNT8BQ93098 351 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 ALKBH8Q96BT7 664 aaKnown RBP4.54□□□□□ -1.68
HPS3-203ENST00000460822 MEGF10Q96KG7 1140 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 CEP41Q9BYV8 373 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 DZANK1Q9NVP4 752 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 EREGO14944 169 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 EPHA1P21709 976 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 PIP4K2BP78356 416 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 DAB2P98082 770 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 PSMD2Q13200 908 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 SF3A1Q15459 793 aaKnown RBP4.54□□□□□ -1.68
HPS3-203ENST00000460822 MCTP1Q6DN14 999 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 FAM177A1Q8N128 213 aaPredicted RBP4.54□□□□□ -1.68
HPS3-203ENST00000460822 AGGF1Q8N302 714 aaeCLIP4.54□□□□□ -1.682e-6■■□□□ 12.3
HPS3-203ENST00000460822 TMEM102Q8N9M5 508 aaPredicted RBP4.54□□□□□ -1.68
HPS3-203ENST00000460822 GALNT11Q8NCW6 608 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 SLC7A3Q8WY07 619 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 SSBP4Q9BWG4 385 aaPredicted RBP4.54□□□□□ -1.68
HPS3-203ENST00000460822 NIF3L1Q9GZT8 377 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 OSGEPQ9NPF4 335 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 VTI1BQ9UEU0 232 aa4.54□□□□□ -1.68
HPS3-203ENST00000460822 FOXD3Q9UJU5 478 aaPredicted RBP4.54□□□□□ -1.68
HPS3-203ENST00000460822 PNMA6FA0A0J9YX94 578 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms