RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 WNT8BQ93098 351 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 TUT1Q9H6E5 874 aaKnown RBP6.08□□□□□ -1.44
RFC4-211ENST00000460408 ANO2Q9NQ90 1003 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 SH2B1Q9NRF2 756 aaPredicted RBP6.08□□□□□ -1.44
RFC4-211ENST00000460408 ABI2Q9NYB9 513 aaPredicted RBP6.08□□□□□ -1.44
RFC4-211ENST00000460408 HIF3AQ9Y2N7 669 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
RFC4-211ENST00000460408 SART1O43290 800 aaKnown RBP6.07□□□□□ -1.44
RFC4-211ENST00000460408 ZAP70P43403 619 aa6.07□□□□□ -1.44
RFC4-211ENST00000460408 PREPP48147 710 aa6.07□□□□□ -1.44
RFC4-211ENST00000460408 MFAP1P55081 439 aaKnown RBP6.07□□□□□ -1.44
RFC4-211ENST00000460408 PIP4K2BP78356 416 aa6.07□□□□□ -1.44
RFC4-211ENST00000460408 FKBP4Q02790 459 aaKnown RBP eCLIP6.07□□□□□ -1.44
RFC4-211ENST00000460408 SF3B2Q13435 895 aaKnown RBP6.07□□□□□ -1.44
RFC4-211ENST00000460408 POP1Q99575 1024 aaKnown RBP6.07□□□□□ -1.44
RFC4-211ENST00000460408 RNF208Q9H0X6 261 aa6.07□□□□□ -1.44
RFC4-211ENST00000460408 OSGEPQ9NPF4 335 aa6.07□□□□□ -1.44
RFC4-211ENST00000460408 H3BRJ5 948 aa6.06□□□□□ -1.44
RFC4-211ENST00000460408 CYP2E1P05181 493 aaPredicted RBP6.06□□□□□ -1.44
RFC4-211ENST00000460408 ARHGAP4P98171 946 aa6.06□□□□□ -1.44
RFC4-211ENST00000460408 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
RFC4-211ENST00000460408 KCNF1Q9H3M0 494 aa6.06□□□□□ -1.44
RFC4-211ENST00000460408 FAM177BA6PVY3 158 aa6.05□□□□□ -1.44
RFC4-211ENST00000460408 WDR64B1ANS9 1081 aa6.05□□□□□ -1.44
RFC4-211ENST00000460408 HOXA10P31260 410 aaPredicted RBP6.05□□□□□ -1.44
RFC4-211ENST00000460408 CCDC27Q2M243 656 aa6.05□□□□□ -1.44
RFC4-211ENST00000460408 NCAPG2Q86XI2 1143 aa6.05□□□□□ -1.44
RFC4-211ENST00000460408 GLYCTKQ8IVS8 523 aa6.05□□□□□ -1.44
RFC4-211ENST00000460408 RGS22Q8NE09 1264 aa6.05□□□□□ -1.44
RFC4-211ENST00000460408 GPR152Q8TDT2 470 aa6.05□□□□□ -1.44
RFC4-211ENST00000460408 PIM2Q9P1W9 311 aa6.05□□□□□ -1.44
RFC4-211ENST00000460408 MEGF11A6BM72 1044 aa6.04□□□□□ -1.44
RFC4-211ENST00000460408 ZBTB39O15060 712 aa6.04□□□□□ -1.44
RFC4-211ENST00000460408 MPSTP25325 297 aa6.04□□□□□ -1.44
RFC4-211ENST00000460408 CABP4P57796 275 aa6.04□□□□□ -1.44
RFC4-211ENST00000460408 NOM1Q5C9Z4 860 aaKnown RBP6.04□□□□□ -1.44
RFC4-211ENST00000460408 PDE12Q6L8Q7 609 aaKnown RBP6.04□□□□□ -1.44
RFC4-211ENST00000460408 DNAJC14Q6Y2X3 702 aaPredicted RBP6.04□□□□□ -1.44
RFC4-211ENST00000460408 RUSC1Q9BVN2 902 aa6.04□□□□□ -1.44
RFC4-211ENST00000460408 STIM2Q9P246 746 aa6.04□□□□□ -1.44
RFC4-211ENST00000460408 NFKBIEO00221 500 aa6.03□□□□□ -1.44
RFC4-211ENST00000460408 FDX2Q6P4F2 183 aa6.03□□□□□ -1.44
RFC4-211ENST00000460408 ABI1Q8IZP0 508 aa6.03□□□□□ -1.44
RFC4-211ENST00000460408 MFSD14AQ96MC6 490 aa6.03□□□□□ -1.44
RFC4-211ENST00000460408 ELP3Q9H9T3 547 aa6.03□□□□□ -1.44
RFC4-211ENST00000460408 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
RFC4-211ENST00000460408 SALL4Q9UJQ4 1053 aa6.03□□□□□ -1.44
RFC4-211ENST00000460408 FAM13AO94988 1023 aa6.02□□□□□ -1.45
RFC4-211ENST00000460408 MAP4P27816 1152 aaKnown RBP6.02□□□□□ -1.45
RFC4-211ENST00000460408 NLRP12P59046 1061 aa6.02□□□□□ -1.45
RFC4-211ENST00000460408 CPSF6Q16630 551 aaKnown RBP eCLIP6.02□□□□□ -1.45
RFC4-211ENST00000460408 MSMPQ1L6U9 139 aa6.02□□□□□ -1.45
RFC4-211ENST00000460408 ABTB2Q8N961 1025 aa6.02□□□□□ -1.45
RFC4-211ENST00000460408 GIMAP7Q8NHV1 300 aa6.02□□□□□ -1.45
RFC4-211ENST00000460408 BIN2Q9UBW5 565 aaPredicted RBP6.02□□□□□ -1.45
RFC4-211ENST00000460408 GAS2O43903 313 aaKnown RBP6.01□□□□□ -1.45
RFC4-211ENST00000460408 PRNPP04156 253 aa6.01□□□□□ -1.45
RFC4-211ENST00000460408 EIF1AXP47813 144 aaKnown RBP6.01□□□□□ -1.45
RFC4-211ENST00000460408 CBLL1Q75N03 491 aa6.01□□□□□ -1.45
RFC4-211ENST00000460408 ATG3Q9NT62 314 aa6.01□□□□□ -1.45
RFC4-211ENST00000460408 DZANK1Q9NVP4 752 aa6.01□□□□□ -1.45
RFC4-211ENST00000460408 CNTN3Q9P232 1028 aa6.01□□□□□ -1.45
RFC4-211ENST00000460408 KANSL3Q9P2N6 904 aa6.01□□□□□ -1.45
RFC4-211ENST00000460408 SOX13Q9UN79 622 aa6.01□□□□□ -1.45
RFC4-211ENST00000460408 LEMD3Q9Y2U8 911 aa6.01□□□□□ -1.45
RFC4-211ENST00000460408 PDE2AO00408 941 aaPredicted RBP6□□□□□ -1.45
RFC4-211ENST00000460408 FZD6O60353 706 aa6□□□□□ -1.45
RFC4-211ENST00000460408 F13BP05160 661 aa6□□□□□ -1.45
RFC4-211ENST00000460408 FOSL1P15407 271 aa6□□□□□ -1.45
RFC4-211ENST00000460408 ARL4DP49703 201 aa6□□□□□ -1.45
RFC4-211ENST00000460408 C19orf57Q0VDD7 668 aa6□□□□□ -1.45
RFC4-211ENST00000460408 SGO2Q562F6 1265 aa6□□□□□ -1.45
RFC4-211ENST00000460408 XKR5Q6UX68 686 aa6□□□□□ -1.45
RFC4-211ENST00000460408 ZNF438Q7Z4V0 828 aa6□□□□□ -1.45
RFC4-211ENST00000460408 NUDT16Q96DE0 195 aaKnown RBP6□□□□□ -1.45
RFC4-211ENST00000460408 TMPRSS13Q9BYE2 586 aa6□□□□□ -1.45
RFC4-211ENST00000460408 SUGCTQ9HAC7 445 aa6□□□□□ -1.45
RFC4-211ENST00000460408 CCDC39Q9UFE4 941 aa6□□□□□ -1.45
RFC4-211ENST00000460408 DCTN4Q9UJW0 460 aa6□□□□□ -1.45
RFC4-211ENST00000460408 ANGEL1Q9UNK9 670 aaKnown RBP6□□□□□ -1.45
RFC4-211ENST00000460408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6□□□□□ -1.45
RFC4-211ENST00000460408 TIAF1O95411 115 aa5.99□□□□□ -1.45
RFC4-211ENST00000460408 ACPPP15309 386 aa5.99□□□□□ -1.45
RFC4-211ENST00000460408 JAG1P78504 1218 aa5.99□□□□□ -1.45
RFC4-211ENST00000460408 HGSNATQ68CP4 663 aa5.99□□□□□ -1.45
RFC4-211ENST00000460408 NFXL1Q6ZNB6 911 aa5.99□□□□□ -1.45
RFC4-211ENST00000460408 SMG8Q8ND04 991 aaKnown RBP5.99□□□□□ -1.45
RFC4-211ENST00000460408 SLC7A3Q8WY07 619 aa5.99□□□□□ -1.45
RFC4-211ENST00000460408 OSBPL1AQ9BXW6 950 aa5.99□□□□□ -1.45
RFC4-211ENST00000460408 IGHA2P01877 340 aa5.98□□□□□ -1.45
RFC4-211ENST00000460408 RPLP1P05386 114 aaKnown RBP5.98□□□□□ -1.45
RFC4-211ENST00000460408 NUTM2GQ5VZR2 741 aa5.98□□□□□ -1.45
RFC4-211ENST00000460408 OGFOD2Q6N063 350 aa5.98□□□□□ -1.45
RFC4-211ENST00000460408 ALKBH2Q6NS38 261 aa5.98□□□□□ -1.45
RFC4-211ENST00000460408 ATCAYQ86WG3 371 aa5.98□□□□□ -1.45
RFC4-211ENST00000460408 FBXL6Q8N531 539 aa5.98□□□□□ -1.45
RFC4-211ENST00000460408 C1orf127Q8N9H9 656 aa5.98□□□□□ -1.45
RFC4-211ENST00000460408 TMEM102Q8N9M5 508 aaPredicted RBP5.98□□□□□ -1.45
RFC4-211ENST00000460408 FBXL18Q96ME1 805 aa5.98□□□□□ -1.45
RFC4-211ENST00000460408 RBCK1Q9BYM8 510 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms