RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 NUP133Q8WUM0 1156 aa17.97■□□□□ 0.47
LMNB1-203ENST00000460265 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
LMNB1-203ENST00000460265 TRERF1Q96PN7 1200 aa17.97■□□□□ 0.47
LMNB1-203ENST00000460265 MTMR7Q9Y216 660 aa17.97■□□□□ 0.47
LMNB1-203ENST00000460265 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
LMNB1-203ENST00000460265 SLC4A8Q2Y0W8 1093 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 MAP3K15Q6ZN16 1313 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 SMIM5Q71RC9 77 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 LUZP1Q86V48 1076 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 NLRP10Q86W26 655 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 TIGD1Q96MW7 591 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 NAPBQ9H115 298 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 RAI14Q9P0K7 980 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 ZMYM1Q5SVZ6 1142 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 NCOA7Q8NI08 942 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 ZNF609O15014 1411 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 PHKA1P46020 1223 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 LEO1Q8WVC0 666 aaPredicted RBP17.96■□□□□ 0.47
LMNB1-203ENST00000460265 SEC31BQ9NQW1 1179 aa17.96■□□□□ 0.47
LMNB1-203ENST00000460265 DHX16O60231 1041 aaKnown RBP17.95■□□□□ 0.46
LMNB1-203ENST00000460265 ST3GAL1Q11201 340 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 ISM2Q6H9L7 571 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 ZSCAN25Q6NSZ9 544 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 TTLL11Q8NHH1 800 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 FAM208AQ9UK61 1670 aaKnown RBP17.95■□□□□ 0.46
LMNB1-203ENST00000460265 A0A087WWV3 80 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 CASP7P55210 303 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 TRIM29Q14134 588 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 ZNF396Q96N95 335 aaPredicted RBP17.95■□□□□ 0.46
LMNB1-203ENST00000460265 ZKSCAN3Q9BRR0 538 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 GJB4Q9NTQ9 266 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 CTSWP56202 376 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 ANO6Q4KMQ2 910 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 CCAR1Q8IX12 1150 aaKnown RBP17.95■□□□□ 0.46
LMNB1-203ENST00000460265 MAGEB6Q8N7X4 407 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 MYL10Q9BUA6 226 aa17.95■□□□□ 0.46
LMNB1-203ENST00000460265 CERS3Q8IU89 383 aa17.94■□□□□ 0.46
LMNB1-203ENST00000460265 DNAJC5Q9H3Z4 198 aa17.94■□□□□ 0.46
LMNB1-203ENST00000460265 JAG2Q9Y219 1238 aa17.94■□□□□ 0.46
LMNB1-203ENST00000460265 B4E1Z4 1266 aa17.94■□□□□ 0.46
LMNB1-203ENST00000460265 FAM182BQ5T319 152 aa17.94■□□□□ 0.46
LMNB1-203ENST00000460265 NGLY1Q96IV0 654 aa17.94■□□□□ 0.46
LMNB1-203ENST00000460265 DNAJC25Q9H1X3 360 aa17.94■□□□□ 0.46
LMNB1-203ENST00000460265 GOLGA6L6A8MZA4 724 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 SLC5A1P13866 664 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 GABPB1Q06547 395 aaPredicted RBP17.93■□□□□ 0.46
LMNB1-203ENST00000460265 APPBP2Q92624 585 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 ISCA1Q9BUE6 129 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
LMNB1-203ENST00000460265 MAP3K12Q12852 859 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 FSIP1Q8NA03 581 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 INCENPQ9NQS7 918 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 SOS2Q07890 1332 aaPredicted RBP17.93■□□□□ 0.46
LMNB1-203ENST00000460265 BIN1O00499 593 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 PDE8AO60658 829 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 NR1I2O75469 434 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 DSCC1Q9BVC3 393 aa17.93■□□□□ 0.46
LMNB1-203ENST00000460265 RGPD5Q99666 1765 aa17.92■□□□□ 0.46
LMNB1-203ENST00000460265 ZNF165P49910 485 aa17.92■□□□□ 0.46
LMNB1-203ENST00000460265 ZNF532Q9HCE3 1301 aa17.92■□□□□ 0.46
LMNB1-203ENST00000460265 IFIT3O14879 490 aaKnown RBP17.92■□□□□ 0.46
LMNB1-203ENST00000460265 TYRO3Q06418 890 aa17.92■□□□□ 0.46
LMNB1-203ENST00000460265 CCDC102BQ68D86 513 aa17.92■□□□□ 0.46
LMNB1-203ENST00000460265 ERICH2A1L162 156 aa17.92■□□□□ 0.46
LMNB1-203ENST00000460265 IRX3P78415 501 aaPredicted RBP17.92■□□□□ 0.46
LMNB1-203ENST00000460265 UTP14AQ9BVJ6 771 aaKnown RBP17.92■□□□□ 0.46
LMNB1-203ENST00000460265 TCHHQ07283 1943 aa17.92■□□□□ 0.46
LMNB1-203ENST00000460265 SH3TC1Q8TE82 1336 aa17.91■□□□□ 0.46
LMNB1-203ENST00000460265 MED23Q9ULK4 1368 aa17.91■□□□□ 0.46
LMNB1-203ENST00000460265 MCAMP43121 646 aa17.91■□□□□ 0.46
LMNB1-203ENST00000460265 C8orf37Q96NL8 207 aa17.91■□□□□ 0.46
LMNB1-203ENST00000460265 ARMT1Q9H993 441 aa17.91■□□□□ 0.46
LMNB1-203ENST00000460265 MARCKSP29966 332 aaPredicted RBP17.91■□□□□ 0.46
LMNB1-203ENST00000460265 CCDC69A6NI79 296 aa17.91■□□□□ 0.46
LMNB1-203ENST00000460265 PDIA3P30101 505 aaKnown RBP17.91■□□□□ 0.46
LMNB1-203ENST00000460265 ZSCAN16Q9H4T2 348 aaPredicted RBP17.91■□□□□ 0.46
LMNB1-203ENST00000460265 MED1Q15648 1581 aaPredicted RBP17.9■□□□□ 0.46
LMNB1-203ENST00000460265 OVOS2A0A0G2JMS6 1433 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 MBD4O95243 580 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 BCAMP50895 628 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 FAM98CQ17RN3 349 aaKnown RBP17.9■□□□□ 0.46
LMNB1-203ENST00000460265 TMEM67Q5HYA8 995 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 PHKBQ93100 1093 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 TRIM34Q9BYJ4 488 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 PDE8BO95263 885 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 ADD1P35611 737 aaKnown RBP17.9■□□□□ 0.46
LMNB1-203ENST00000460265 TNNT3P45378 269 aaPredicted RBP17.9■□□□□ 0.46
LMNB1-203ENST00000460265 CTDSPL2Q05D32 466 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 FILIP1Q7Z7B0 1213 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 USP28Q96RU2 1077 aa17.9■□□□□ 0.46
LMNB1-203ENST00000460265 A0A1B0GVL5 298 aa17.89■□□□□ 0.46
LMNB1-203ENST00000460265 CIAO1O76071 339 aa17.89■□□□□ 0.46
LMNB1-203ENST00000460265 CYP19A1P11511 503 aaPredicted RBP17.89■□□□□ 0.46
LMNB1-203ENST00000460265 METAP2P50579 478 aaKnown RBP eCLIP17.89■□□□□ 0.46
LMNB1-203ENST00000460265 TTF1Q15361 905 aaPredicted RBP17.89■□□□□ 0.45
LMNB1-203ENST00000460265 NSUN7Q8NE18 718 aaKnown RBP17.89■□□□□ 0.45
LMNB1-203ENST00000460265 ANKRD7Q92527 254 aa17.89■□□□□ 0.45
LMNB1-203ENST00000460265 ZNF592Q92610 1267 aa17.89■□□□□ 0.45
LMNB1-203ENST00000460265 GPR108Q9NPR9 543 aa17.89■□□□□ 0.45
LMNB1-203ENST00000460265 WWC3Q9ULE0 1092 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms