RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 TAF5LO75529 589 aa23.19■■□□□ 1.3
HOXD3-204ENST00000459979 KCNJ4P48050 445 aa23.19■■□□□ 1.3
HOXD3-204ENST00000459979 MLLT1Q03111 559 aaPredicted RBP23.19■■□□□ 1.3
HOXD3-204ENST00000459979 MOB2Q70IA6 237 aa23.19■■□□□ 1.3
HOXD3-204ENST00000459979 HELBQ8NG08 1087 aaPredicted RBP23.19■■□□□ 1.3
HOXD3-204ENST00000459979 RNF186Q9NXI6 227 aa23.19■■□□□ 1.3
HOXD3-204ENST00000459979 PRAMEF18Q5VWM3 479 aa23.18■■□□□ 1.3
HOXD3-204ENST00000459979 RASAL3Q86YV0 1011 aa23.18■■□□□ 1.3
HOXD3-204ENST00000459979 CSRNP1Q96S65 589 aa23.18■■□□□ 1.3
HOXD3-204ENST00000459979 PUS3Q9BZE2 481 aaKnown RBP23.18■■□□□ 1.3
HOXD3-204ENST00000459979 MROH5Q6ZUA9 1318 aa23.17■■□□□ 1.3
HOXD3-204ENST00000459979 KLRK1P26718 216 aa23.17■■□□□ 1.3
HOXD3-204ENST00000459979 RGS19P49795 217 aa23.17■■□□□ 1.3
HOXD3-204ENST00000459979 NBPF9Q3BBW0 867 aa23.17■■□□□ 1.3
HOXD3-204ENST00000459979 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
HOXD3-204ENST00000459979 FRAT1Q92837 279 aaPredicted RBP23.17■■□□□ 1.3
HOXD3-204ENST00000459979 SAGE1Q9NXZ1 904 aa23.17■■□□□ 1.3
HOXD3-204ENST00000459979 SNAP23O00161 211 aa23.16■■□□□ 1.3
HOXD3-204ENST00000459979 RFX5P48382 616 aaPredicted RBP23.16■■□□□ 1.3
HOXD3-204ENST00000459979 UBE4AQ14139 1066 aa23.16■■□□□ 1.3
HOXD3-204ENST00000459979 STRIP1Q5VSL9 837 aa23.16■■□□□ 1.3
HOXD3-204ENST00000459979 GNAI3P08754 354 aa23.15■■□□□ 1.3
HOXD3-204ENST00000459979 DACT2Q5SW24 774 aa23.15■■□□□ 1.3
HOXD3-204ENST00000459979 MEIS3Q99687 375 aa23.15■■□□□ 1.3
HOXD3-204ENST00000459979 CD209Q9NNX6 404 aa23.15■■□□□ 1.3
HOXD3-204ENST00000459979 PITPNM2Q9BZ72 1349 aa23.14■■□□□ 1.3
HOXD3-204ENST00000459979 FBXO3Q9UK99 471 aa23.14■■□□□ 1.29
HOXD3-204ENST00000459979 TNNQ9UQP3 1299 aa23.14■■□□□ 1.29
HOXD3-204ENST00000459979 UBE2Q2LH0YL09 131 aa23.13■■□□□ 1.29
HOXD3-204ENST00000459979 PTPN12Q05209 780 aaKnown RBP23.13■■□□□ 1.29
HOXD3-204ENST00000459979 LRRC24Q50LG9 513 aa23.13■■□□□ 1.29
HOXD3-204ENST00000459979 LRRFIP2Q9Y608 721 aaKnown RBP23.13■■□□□ 1.29
HOXD3-204ENST00000459979 MYO3BQ8WXR4 1341 aa23.12■■□□□ 1.29
HOXD3-204ENST00000459979 PLIN1O60240 522 aa23.12■■□□□ 1.29
HOXD3-204ENST00000459979 SASH1O94885 1247 aa23.12■■□□□ 1.29
HOXD3-204ENST00000459979 IL1R1P14778 569 aa23.12■■□□□ 1.29
HOXD3-204ENST00000459979 MMP14P50281 582 aa23.12■■□□□ 1.29
HOXD3-204ENST00000459979 ZNF804AQ7Z570 1209 aa23.12■■□□□ 1.29
HOXD3-204ENST00000459979 VGLL2Q8N8G2 317 aa23.12■■□□□ 1.29
HOXD3-204ENST00000459979 EYA2O00167 538 aa23.11■■□□□ 1.29
HOXD3-204ENST00000459979 WNT10BO00744 389 aa23.11■■□□□ 1.29
HOXD3-204ENST00000459979 PDE8BO95263 885 aa23.11■■□□□ 1.29
HOXD3-204ENST00000459979 FKBP1BP68106 108 aa23.11■■□□□ 1.29
HOXD3-204ENST00000459979 TTLL5Q6EMB2 1281 aa23.11■■□□□ 1.29
HOXD3-204ENST00000459979 KLHDC4Q8TBB5 520 aa23.11■■□□□ 1.29
HOXD3-204ENST00000459979 CLUAP1Q96AJ1 413 aa23.11■■□□□ 1.29
HOXD3-204ENST00000459979 MTX1Q13505 466 aa23.1■■□□□ 1.29
HOXD3-204ENST00000459979 TTLL12Q14166 644 aaPredicted RBP23.1■■□□□ 1.29
HOXD3-204ENST00000459979 CIAO1O76071 339 aa23.09■■□□□ 1.29
HOXD3-204ENST00000459979 METTL24Q5JXM2 366 aa23.09■■□□□ 1.29
HOXD3-204ENST00000459979 OGFOD1Q8N543 542 aa23.09■■□□□ 1.29
HOXD3-204ENST00000459979 TMEM57Q8N5G2 664 aa23.09■■□□□ 1.29
HOXD3-204ENST00000459979 GTF2IP78347 998 aa23.08■■□□□ 1.29
HOXD3-204ENST00000459979 MKRN3Q13064 507 aaKnown RBP23.08■■□□□ 1.29
HOXD3-204ENST00000459979 ATG9AQ7Z3C6 839 aa23.08■■□□□ 1.29
HOXD3-204ENST00000459979 KIAA0825Q8IV33 1275 aa23.08■■□□□ 1.29
HOXD3-204ENST00000459979 FAM84BQ96KN1 310 aaPredicted RBP23.08■■□□□ 1.29
HOXD3-204ENST00000459979 COPRSQ9NQ92 184 aa23.08■■□□□ 1.29
HOXD3-204ENST00000459979 SOX10P56693 466 aa23.07■■□□□ 1.28
HOXD3-204ENST00000459979 FKBP1AP62942 108 aaKnown RBP23.07■■□□□ 1.28
HOXD3-204ENST00000459979 PRKG1Q13976 671 aa23.07■■□□□ 1.28
HOXD3-204ENST00000459979 TDRD7Q8NHU6 1098 aaKnown RBP23.07■■□□□ 1.28
HOXD3-204ENST00000459979 ECM29Q5VYK3 1845 aa23.06■■□□□ 1.28
HOXD3-204ENST00000459979 GNAI2P04899 355 aa23.06■■□□□ 1.28
HOXD3-204ENST00000459979 FGFR2P21802 821 aa23.06■■□□□ 1.28
HOXD3-204ENST00000459979 HIBADHP31937 336 aaKnown RBP23.06■■□□□ 1.28
HOXD3-204ENST00000459979 FBXO33Q7Z6M2 555 aa23.06■■□□□ 1.28
HOXD3-204ENST00000459979 DZIP1LQ8IYY4 767 aaKnown RBP23.06■■□□□ 1.28
HOXD3-204ENST00000459979 TBC1D8O95759 1140 aa23.05■■□□□ 1.28
HOXD3-204ENST00000459979 FAM205AQ6ZU69 1335 aa23.05■■□□□ 1.28
HOXD3-204ENST00000459979 GYG1P46976 350 aa23.04■■□□□ 1.28
HOXD3-204ENST00000459979 PUM3Q15397 648 aaKnown RBP23.04■■□□□ 1.28
HOXD3-204ENST00000459979 CTU1Q7Z7A3 348 aaKnown RBP23.04■■□□□ 1.28
HOXD3-204ENST00000459979 FTSJ3Q8IY81 847 aaKnown RBP23.04■■□□□ 1.28
HOXD3-204ENST00000459979 REM2Q8IYK8 340 aaPredicted RBP23.04■■□□□ 1.28
HOXD3-204ENST00000459979 RLBP1P12271 317 aa23.03■■□□□ 1.28
HOXD3-204ENST00000459979 NF2P35240 595 aa23.03■■□□□ 1.28
HOXD3-204ENST00000459979 IL15P40933 162 aaPredicted RBP23.03■■□□□ 1.28
HOXD3-204ENST00000459979 HDAC9Q9UKV0 1011 aa23.03■■□□□ 1.28
HOXD3-204ENST00000459979 FZD1Q9UP38 647 aa23.03■■□□□ 1.28
HOXD3-204ENST00000459979 SRGAP3O43295 1099 aa23.02■■□□□ 1.28
HOXD3-204ENST00000459979 CAVIN4Q5BKX8 364 aa23.02■■□□□ 1.28
HOXD3-204ENST00000459979 CERS5Q8N5B7 392 aa23.02■■□□□ 1.28
HOXD3-204ENST00000459979 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.02■■□□□ 1.28
HOXD3-204ENST00000459979 PCDHAC2Q9Y5I4 1007 aa23.02■■□□□ 1.28
HOXD3-204ENST00000459979 ZBTB7BO15156 539 aaPredicted RBP23.01■■□□□ 1.27
HOXD3-204ENST00000459979 IFIT1P09914 478 aaKnown RBP23.01■■□□□ 1.27
HOXD3-204ENST00000459979 MS4A1P11836 297 aa23.01■■□□□ 1.27
HOXD3-204ENST00000459979 APOBEC3FQ8IUX4 373 aaKnown RBP23.01■■□□□ 1.27
HOXD3-204ENST00000459979 LPIN2Q92539 896 aa23.01■■□□□ 1.27
HOXD3-204ENST00000459979 ZBED3Q96IU2 234 aaPredicted RBP23.01■■□□□ 1.27
HOXD3-204ENST00000459979 CEP126Q9P2H0 1117 aa23.01■■□□□ 1.27
HOXD3-204ENST00000459979 SLC34A2O95436 690 aa23■■□□□ 1.27
HOXD3-204ENST00000459979 ZNF296Q8WUU4 475 aaPredicted RBP23■■□□□ 1.27
HOXD3-204ENST00000459979 SIL1Q9H173 461 aa23■■□□□ 1.27
HOXD3-204ENST00000459979 RCAN3Q9UKA8 241 aa23■■□□□ 1.27
HOXD3-204ENST00000459979 PA2G4Q9UQ80 394 aaKnown RBP23■■□□□ 1.27
HOXD3-204ENST00000459979 JAG2Q9Y219 1238 aa23■■□□□ 1.27
HOXD3-204ENST00000459979 F8W031 263 aaPredicted RBP22.99■■□□□ 1.27
HOXD3-204ENST00000459979 ARMC9Q7Z3E5 817 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms